comparison cytoBand.py @ 28:6aa28a85cc38 draft

planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 5bbecd016ad3a784ad030cb82a09a3ac40dc6060

27:cdd33c5c8ac1

        with open(myBigBedFilePath, 'w') as bigBedFile:
            subtools.bedToBigBed(sortedBedFile.name,
                                 self.chromSizesFile.name,
                                 bigBedFile.name,
                                 typeOption='bed4',
                                 autoSql=auto_sql_option)

        # Create the Track Object
        self.createTrack(file_path=trackName,
                         track_name='cytoBandIdeo',

28:6aa28a85cc38

        with open(myBigBedFilePath, 'w') as bigBedFile:
            subtools.bedToBigBed(sortedBedFile.name,
                                 self.chromSizesFile.name,
                                 bigBedFile.name,
                                 typeOption='bed4+1',
                                 tab='True',
                                 autoSql=auto_sql_option)

        # Create the Track Object
        self.createTrack(file_path=trackName,
                         track_name='cytoBandIdeo',