Mercurial > repos > rmarenco > hubarchivecreator

comparison templates/trackDb/layout.txt @ 27:cdd33c5c8ac1 draft

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planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 05fc99e5a081e3f2a0f152ad952ba60c50661229
author yating-l
date Mon, 10 Jul 2017 12:28:50 -0400
parents df42241d3731
children 7e8a8b732db3
comparison
equal deleted inserted replaced
26:df42241d3731 27:cdd33c5c8ac1
28 group ${trackDb.group_name.lower().replace(' ', '_')} 28 group ${trackDb.group_name.lower().replace(' ', '_')}
29 searchIndex name 29 searchIndex name
30 % if "NCBI" in trackDb.database: 30 % if "NCBI" in trackDb.database:
31 url https://www.ncbi.nlm.nih.gov/protein/$$ 31 url https://www.ncbi.nlm.nih.gov/protein/$$
32 urlLabel ${trackDb.database} Details: 32 urlLabel ${trackDb.database} Details:
33 iframeUrl https://www.ncbi.nlm.nih.gov/protein/$$
34 iframeOptions height='600' width='800'
33 % elif "UniProt" in trackDb.database: 35 % elif "UniProt" in trackDb.database:
34 url http://www.uniprot.org/uniprot/$$ 36 url http://www.uniprot.org/uniprot/$$
35 urlLabel ${trackDb.database} Details: 37 urlLabel ${trackDb.database} Details:
38 iframeUrl http://www.uniprot.org/uniprot/$$
39 iframeOptions height='600' width='800'
36 % elif "FlyBase" in trackDb.database: 40 % elif "FlyBase" in trackDb.database:
37 url http://flybase.org/reports/$$ 41 url http://flybase.org/reports/$$
38 urlLabel ${trackDb.database} Details: 42 urlLabel ${trackDb.database} Details:
43 iframeUrl http://flybase.org/reports/$$
44 iframeOptions height='600' width='800'
39 % else: 45 % else:
40 url https://www.ncbi.nlm.nih.gov/gquery/?term=$$ 46 url https://www.ncbi.nlm.nih.gov/gquery/?term=$$
41 urlLabel NCBI Details: 47 urlLabel NCBI Details:
48 iframeUrl https://www.ncbi.nlm.nih.gov/gquery/?term=$$
49 iframeOptions height='600' width='800'
42 % endif 50 % endif
43 51
44 % elif "bigPsl" in trackDb.trackType and trackDb.database: 52 % elif "bigPsl" in trackDb.trackType and trackDb.database:
45 53
46 track ${trackDb.trackName} 54 track ${trackDb.trackName}
55 group ${trackDb.group_name.lower().replace(' ', '_')} 63 group ${trackDb.group_name.lower().replace(' ', '_')}
56 searchIndex name 64 searchIndex name
57 % if "NCBI" in trackDb.database: 65 % if "NCBI" in trackDb.database:
58 url https://www.ncbi.nlm.nih.gov/nuccore/$$ 66 url https://www.ncbi.nlm.nih.gov/nuccore/$$
59 urlLabel NCBI Details: 67 urlLabel NCBI Details:
68 iframeUrl https://www.ncbi.nlm.nih.gov/nuccore/$$
69 iframeOptions height='600' width='800'
60 % else: 70 % else:
61 url https://www.ncbi.nlm.nih.gov/gquery/?term=$$ 71 url https://www.ncbi.nlm.nih.gov/gquery/?term=$$
62 urlLabel NCBI Details: 72 urlLabel NCBI Details:
73 iframeUrl https://www.ncbi.nlm.nih.gov/gquery/?term=$$
74 iframeOptions height='600' width='800'
63 % endif 75 % endif
64 76
65 % else: 77 % else:
66 78
67 ## See this http://genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html 79 ## See this http://genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html