diff Gtf.py @ 17:c02720d1afee draft

planemo upload for repository https://github.com/goeckslab/hub-archive-creator commit 1adbf397de1fc7af4d91e026093d7fff983e21cf

--- a/Gtf.py	Sun Sep 25 11:25:38 2016 -0400
+++ b/Gtf.py	Fri Sep 30 15:14:24 2016 -0400
@@ -21,6 +21,8 @@
         self.name_gtf = data_gtf["name"]
         self.priority = data_gtf["order_index"]
         self.track_color = data_gtf["track_color"]
+        # TODO: Think about how to avoid repetition of the group_name everywhere
+        self.group_name = data_gtf["group_name"]
 
         #print "Creating TrackHub GTF from (falsePath: %s; name: %s)" % ( self.input_gtf_false_path, self.name_gtf)
 
@@ -61,6 +63,7 @@
                          long_label=self.name_gtf, track_type='bigGenePred',
                          visibility='dense', priority=self.priority,
                          track_file=myBigBedFilePath,
-                         track_color=self.track_color)
+                         track_color=self.track_color,
+                         group_name=self.group_name)
 
         print("- Gtf %s created" % self.name_gtf)