Mercurial > repos > rmarenco > multi_fasta_glimmer_hmm
annotate glimmer_hmm.loc.sample @ 0:0ddb5ee32ff6 draft default tip
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
| author | rmarenco |
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| date | Thu, 18 Aug 2016 18:50:00 -0400 |
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| rev | line source |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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1 #This file lists the locations of all the trained_dir files |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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2 #under the "trained_dir" directory (a directory that contains a directory |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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3 #for each organism used by glimmer_hmm). |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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4 #This file has the format (white space characters are |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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5 #TAB characters): |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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6 # |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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7 #<unique_id> <display_name> <file_path> |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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8 # |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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9 #glimmer_hmm.loc could look something like this: |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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10 # |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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11 #human Human /path/to/trained_dir/human |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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12 #celegans Celegan /path/to/trained_dir/Celegans |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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13 #arabidopsis Arabidopsis /path/to/trained_dir/arabidopsis |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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14 #rice Rice /path/to/trained_dir/rice |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
diff
changeset
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15 #zebrafish Zebrafish /path/to/trained_dir/zebrafish |
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0ddb5ee32ff6
planemo upload for repository https://github.com/remimarenco/multi_fasta_glimmerhmm.git commit 28bd73b26b50165eded1d9ba995979acdf005ad1-dirty
rmarenco
parents:
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16 # |
