diff test-data/SP1_f.fastq @ 0:9839a3fe72f7 draft default tip

planemo upload for repository https://github.com/bgruening/galaxytools/blob/master/tools/trim_adapters commit 3d0b670cda6522e5c442b144785b2f9f517f103d

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/SP1_f.fastq	Wed Jun 20 15:48:09 2018 -0400
@@ -0,0 +1,500 @@
+@cluster_2:UMI_ATTCCG
+TTTCCGGGGCACATAATCTTCAGCCGGGCGC
++
+9C;=;=<9@4868>9:67AA<9>65<=>591
+@cluster_12:UMI_GGTCAA
+GCAGTTTAAGATCATTTTATTGAAGAGCAAG
++
+?7?AEEC@>=1?A?EEEB9ECB?==:B.A?A
+@cluster_29:UMI_GCAGGA
+CCCCCTTAAATAGCTGTTTATTTGGCCCCAG
++
+8;;;>DC@DAC=B?C@9?B?CDCB@><<??A
+@cluster_36:UMI_AACAGA
+TCCCCCCCCCAAATCGGAAAAACACACCCCC
++
+5?:5;<02:@977=:<0=9>@5>7>;>*3,-
+@cluster_39:UMI_GAACCG
+CCTTCCATCACCAGATCGGAAAAACACACGC
++
+00>7;8@5<192?/8;0;;>=3=/3239713
+@cluster_53:UMI_GTGGGG
+GGAAAATGAAAATGTTGGATGAGAACAATTA
++
+<>=CCA@A8>?=86AB@>0?76<993=@=7.
+@cluster_58:UMI_GTTTTG
+AAAGCAATCCACAGAAGGGCATTTCTACCGA
++
+@D?B:AA??=;>?=@?A=@:@EEB?A=@<@<
+@cluster_63:UMI_TTTCCC
+GCAACCATACTCCCCCCGGAACCCAAAGACT
++
+@:A@@A@C<?D?;;98<=>=@;<AAD?==?D
+@cluster_70:UMI_CCGGGA
+CTTTTTCTTCTAAAATTTTTTCTTCTCTGGC
++
+?DEEEB?DB?A@DD?EEEEEB?DB?D9CB/.
+@cluster_82:UMI_TTTTTG
+GCTTATGTTTTATAAAAATAAGTTGCCCCAG
++
+75;6>>>>DEC7?6CC>A=9=>@C1<<9>12
+@cluster_87:UMI_TGACAC
+GGTTGAGCACAGGGTACTTTATTGATGGTAC
++
+=@E@B=B::;;A=?A=9DEB9ECB8?B@@97
+@cluster_90:UMI_ACGGGG
+TTTTTTTGTGAAGGAGTCTTTCCCCCCAGAC
++
+CEEEEDB96203:8+01.3353/897?.+,0
+@cluster_96:UMI_ACTAGG
+GGAATGCAACAACTTTATTGAAAGGAAAGTG
++
+=>@AB::A??A@?DEC?ECB@D?A>=C?A;9
+@cluster_99:UMI_CAACAA
+TTTGTTTTTTTTTTTTCCACCCCCACATGGA
++
+<DB1BD:5?9BB:=63<5+56721--/11;3
+@cluster_107:UMI_TCCATG
+ATCGGAAGAGCACACGTCTGAACTCCAGTCA
++
+<?;=>?<=9;59:6<@?>C<99=D79<?354
+@cluster_114:UMI_TTTATG
+TCTTTTTTTCTTTTCTTTTTTTTTTTTTTTA
++
+B?DEEEEEB?DEEB?DEEEEEEEEEEEEE<.
+@cluster_124:UMI_CGGCGC
+GAGACGGAGTTTCACTCTTATTGCCCCCCAG
++
+2///1:>7A7;B3.8C?@>.4C5><;;9A23
+@cluster_130:UMI_GTAGGG
+GGTAGAGATAGGGTCTTGCTATGTAGCCCAG
++
+4@:<=8=;B69;@9<9=:?87@:B:8.293;
+@cluster_134:UMI_TAGTGA
+TGTTAGACAAAATAAATGTATTTTTTCACTC
++
+1/32++,2668/1/5/<14/69A=@62*-40
+@cluster_140:UMI_TTACTC
+GGACCCCCCCCAAAGTCGGAAAACACACCCC
++
+9//865/-71336003/2-566620433.2+
+@cluster_148:UMI_GCCTGG
+CATACCCCCCCCAGATCGGAAAAACACACGC
++
+9@C=@47;;9<A?,<?==>?C;D3><:=?32
+@cluster_152:UMI_TCGAAA
+GCTGTCTAGTCATCCTCGTCGGTCTTCTGCT
++
+B?C@B?A=ABA@??>D=@B==@B?DB?C:?D
+@cluster_159:UMI_CGGGGG
+GTCTGCACAGATAAATCTTTCTTCTCATTAC
++
+4:7<+*-/0.,3@B300=;41=3=20=9;-2
+@cluster_164:UMI_GCTGAG
+TATTTTTTTTTTTTTTTTTTTTTTTTGTGTG
++
+??E7EEECEEDEEEECEEEEEEEED20101*
+@cluster_169:UMI_TGAGCC
+AAAAATGCCTGGAAATCACTTGCTAGTTACA
++
+ADCB<B:>>CB>@DA?A9?DB:?A=AEC=>3
+@cluster_176:UMI_TGGGCG
+GGGTTCAAACCCCCAGATCGGAAAAGACACA
++
+<=@BB;AD?96:;@?=:?<=>:>9</,-+-+
+@cluster_182:UMI_TATCAG
+AATGTTCTTTCCTCTGTTGGCTTTGGCCATT
++
+@@41EB05E1>.6140DC5@68EC70=65E3
+@cluster_189:UMI_GCCTTG
+TTGGTATATAAACTATTTATTAACAGACAAG
++
+ECB@C?C?C@D??@?EEC9EC@@>?==>A=B
+@cluster_197:UMI_AGGATG
+GGCATATGAAAATTTATTACTACAGTGTTTT
++
+=@:@C?BB@DDAEEC?@C=?A=??AA@DEE=
+@cluster_211:UMI_ACTGGC
+CCCCCCCCAAATCGGAAAAACACACCCCTAA
++
+<<<<<<<AADA?==>@DDC??=?=@<;>@@?
+@cluster_216:UMI_TATTCC
+GCTTTGCAACCATACTCCCCCCAAGATCGGA
++
+<>D87:-A9@::>;;9?;;<<@14;2;/=.9
+@cluster_218:UMI_TGCTCC
+CCCCCCCAAAATCGGAAAAACACACCCCTAA
++
+;;;<<;1/7>=?2=;@D<C=<797@7235@<
+@cluster_222:UMI_TTTGTG
+TGAGACAGGGTTCGCCAGCGTGGACCCTTTA
++
+4:/4+5275/34,4-060./54.+0*0472,
+@cluster_228:UMI_GCCTTC
+CAGGTGTTTTTTCTCCCAGATCGGAAGAGCA
++
+@?A@A@EEEEEB?D?<A?=<?==>@?==B58
+@cluster_232:UMI_TGTTCC
+TCCCCCCCCCAAATCGGAAAAACACACCCCC
++
+D?<<<<<<<AADA?==>@DDD@?=?=@:<5+
+@cluster_241:UMI_CTCTCA
+CAACTTTCCCTTACCCCAGATCGGAAGAGCA
++
+?A@?DEB?<>DC=@<<A?=<?==>@?==B:<
+@cluster_252:UMI_CAAAAG
+TACCTTTGAGACAGAGTCTCGCTCTGTCACC
++
+B=@>DECB==:=;==AB?D=B?D?C@BA=@;
+@cluster_254:UMI_TGTGCC
+TAATGTGCTACTTTTAATTTATTAAAATCCC
++
+A@AB@A:?A=?DEEC@AEEC?E;@DDA??<<
+@cluster_258:UMI_TGCGGC
+GTTTGTTTTTTTTTTTTTCCCAGATCGGAAG
++
+>BEC;EEEEEEEEDEEC48-543197=>?.2
+@cluster_272:UMI_ACTCGA
+AACTTGACACCTTTAAAATAGCATTAAACAG
++
+D72D>?<==1=4EC3DD24/4.@8C1D0/48
+@cluster_281:UMI_CCGATA
+TAGTCTTAGCATTTACTTTCCCCCCAGATCG
++
+B=A>?DC=B:@EE@=>DEB?<;<<@?=<=8B
+@cluster_287:UMI_GGATGC
+GGACATAATAATAACAATTGAATGTCTGCAC
++
+=>=?@C@AC@AC@@?AAECB@AB@B?C::<?
+@cluster_290:UMI_TTCCCC
+ACTTTTGAGACAGGGTCTTGCTCTTGCTATG
++
+=?DEECB===?>A=@B?DC:?D?DC:?A?B:
+@cluster_295:UMI_TCGGGG
+CTTGGTACATGATTTTATAGCAAGCACATTT
++
+?DCB@C=?@BB<EEEC?C=B:A?B:=?@EEB
+@cluster_298:UMI_TTGACA
+GTCAAATATTTATTGAATGGTGGAAAACCAT
++
+/AAADAC>EEC?ECB@ABB@=B>@DD@@=?:
+@cluster_301:UMI_GCGGGC
+GGCTTTGGGAAGCCCCGCGGGGGACCGGCAC
++
+6@>;E4B=-:.1<<;,4429==>,/6-?)24
+@cluster_303:UMI_AGTCAA
+GTCAAAAGAAAAGCGTTTATTTAAAAAAATC
++
+0100CD0745B.2/04DC3C462;DDD6A=1
+@cluster_310:UMI_TAAACC
+CTTATCATTTTAATCGATTTTAATGATTATT
++
+=DC??A@EEEC@A?=@<EEEC@ABB<EC?E5
+@cluster_321:UMI_AGAGGA
+TTGACGACCGCGCCATGCTGTAATATACAAC
++
+8?9:10+/2:240/.1)59/1/3599-/000
+@cluster_330:UMI_TACCGC
+GAGATGGAGTCTTCTCTCAGATCGGAAGAGC
++
+>0=-AA<::1-5?75:3473454.576-:90
+@cluster_338:UMI_TTACCC
+GTTGTCAAATTATCCTTTATTGAAATGTTTT
++
+/3B46=9D<9408895E?17B<:D?1059D6
+@cluster_340:UMI_GGTTAC
+CTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
++
+>DEEEEEEEEEEEEEEEEEEEEEEEEEEEEB
+@cluster_347:UMI_ATCAAC
+GACTGAACTAAGTGGTTTTTTTATTAGAGAA
++
+>=?CB@@>A@>AAB85EEDEEC?EB<==9?5
+@cluster_351:UMI_TGTTAG
+CTGACTAATATGCCCCAGATCGGAAAAGCAC
++
+?CB=?A@AC?B:><<A?=<?==>@DA?B:=7
+@cluster_359:UMI_CTACAC
+CCTAGAAACAGAATAGTCTTTACTTTTACTG
++
+<>A==@D@??=@AC=AB?DEC=?DEEC=?C:
+@cluster_367:UMI_GAGGTG
+CCCCCCCCCAAATCGGAAAAACACACCCCTA
++
+><<<<<<<AADA?==>@DDD@?=?=@<;>A=
+@cluster_373:UMI_ACTGCA
+CAACTATTTAAAAACGTAAAAACTATTCTTA
++
+=A??A?EEC@DDD??@C@DDD??A9EB?6:5
+@cluster_376:UMI_AAGCAC
+TCTTTGTACAAAATTTTATTAAAGGTCTTTA
++
+9:CDC@<<<ADD>EEE8:E2@D7A@2>DD:5
+@cluster_382:UMI_CGCGCG
+CGGTCATAAGTTTAATGAAGTCCCCAGATCG
++
+?=@;A@C@?A@EC@ABB@?;B?<<A?=<=<B
+@cluster_388:UMI_GCGGGC
+TCTTCCTCTTCTTTCTCCCCAGATCGGAAGA
++
+C?DB?>D?DB?DEB?D?<<A?=<?==>@?==
+@cluster_390:UMI_CGGTGG
+AGACAGAATTTCGCTCCTGTAGCCCCCCAGA
++
+=<<:?=@<EE:=B>C?=C?77;<7;926?2:
+@cluster_399:UMI_CAAACA
+CTTTCTCCAGTTGTTCCCAGATCGGAAGAGC
++
+9DE@?C?A?AEC@E<?<@;7<?===@?<=@9
+@cluster_404:UMI_CTTAAA
+TTTCACACTGAAATATCCTTTTATTGCAACT
++
+EEBA=?=?CB@DAC???>DEEC?EC:9A@?9
+@cluster_408:UMI_AAACAC
+CTTTTACACTGGCCACAGAGCGTTTATTGAC
++
+9DEE<=>=?CB@>A=??==B?@EE<?E:A=7
+@cluster_428:UMI_GGACCG
+CCTTTTCCTTTCTCTTTTTTTTCTTTAGTGT
++
+>>DEEB?>DEB?D?DEEEEEEB?DEC=AA@?
+@cluster_435:UMI_TCGTCA
+GGCTTTGCAACCATACTCCCCCCGGAACCCA
++
+A@?AEC::@>=A@C=?D9:;;<==>7?<;@9
+@cluster_441:UMI_GCATAG
+GCTCTAGAGGGGGTAGAGGGGGTGCTATAGG
++
+@?D?A===A===@C===A===@A:?A?C=A@
+@cluster_448:UMI_GAGAAC
+GGAAATAAAAGCACAACTATATTTGGGCACC
++
+=>@DAC@AD?>9<?A@?A>C?EECB=@:=@;
+@cluster_455:UMI_GTGAGC
+CCTTTCTTCTCTCCCCAGATCGGAAAAGCAC
++
+<>DEB?DB?D?D?<<A?=<?==>@C=?B9=@
+@cluster_460:UMI_TCTCAC
+GCTTTTCTTTCTTTCTCTATTCTTTCTTCCC
++
+1-34461:992967.3./-410983.51-*)
+@cluster_467:UMI_AATCTG
+GTTGGTTAAATCTTTACTCACAGTAATTTAC
++
+@ECB@EC?CA??DEC=?DA=??AC@AEEC=@
+@cluster_472:UMI_GAGGCA
+CCCTTGGACCATAAATTTTTATTGGCAGGTC
++
+@<>DCB>=@A@C@DAEEEEC?ECB@:?A@9=
+@cluster_478:UMI_TGAGTA
+CTTTGTACAAAATTTTATTAAAGGTCTTTAG
++
+?DEC@C=?ADDAEEEC?EC@D>A@B?DEC=B
+@cluster_489:UMI_GGCGTG
+TGTGTTCCAATTCTTTTATTATTCGGGCCTC
++
[phone]=D6-48.:5.,.:.438
+@cluster_491:UMI_TTCCCG
+GAGACAGAGTTTCGCTCTTGTCACCCAGGCT
++
+>===??==AEEB=B?D?DC@BA=@<A?@@5?
+@cluster_493:UMI_TTATTG
+GGCCAACTGAATGTAATCTAGTTTATTCAAC
++
+=@>AA@?CB@AB@C@A??A=AEEC?EBAA@@
+@cluster_503:UMI_CGGTGA
+CAGACTGAGTTTCACTCTTTGTTGCCCAGGC
++
+??==?CB=AEEBA=?D?DEC@EC:><>?A@8
+@cluster_513:UMI_TCGCTC
+CACTGTTAAAAACATTTATTCTGATACATTC
++
+A=?C@EB@DDD@?@EEC?EB?CB<C=?@EB4
+@cluster_521:UMI_TCCATA
+TGTCCAGCTGCTCCTGATCGGAATACAGCAC
++
+1/22@36;C-03--2674,1-/424122),/
+@cluster_524:UMI_AGGGAC
+TTTTTTTTTTTTTTTTTTTTTTTTCTCCAGC
++
+CEEEEEEEEEEEEEEEEEEEEEE415=97;-
+@cluster_530:UMI_GACACA
+GGTGCATATGCATAAGTGGAGCCCAGAGGGC
++
+>@A::@C?B::@C@?A?B>=B>;A?==:1:>
+@cluster_535:UMI_CCGCTA
+CTCAGCACCCATTGTAAATTATTTGTGGATG
++
+9DA?B8=?<A7DC@B9D0EC?EEC@A>.<A+
+@cluster_537:UMI_GACTCC
+GACGCTCACACTTAGTTTTTATTAGCCACAG
++
+7;651C=9<8:D78?D>DE4855<396;1;1
+@cluster_545:UMI_ACGATC
+CTTGCTTCAGTTTTATTTGTACAAATATCAC
++
+79A6?66@;A;EE52EE41?=:A56B<.547
+@cluster_563:UMI_GCCTCG
+CCCCCCCCCCAAATCGGAAAAACACACCCCC
++
+0;;71;;;<@3:??=8>:@;?=>8>9453;/
+@cluster_566:UMI_CGCATA
+GACGGATGAGTCTTTTAATAGAAAAACACAC
++
+==?=><BB=AB?DEEC<AC==@DBC@>=?;7
+@cluster_572:UMI_AAGACC
+GCAACCATACTCCCCCAGATCGGAAAAGCAC
++
+B:A@@A@C=?D?<<<A?=<?==>@D6?B:=@
+@cluster_586:UMI_AATTCA
+CTGCTCAGCTCTTTATTGATTGGTGTGCCCA
++
+??:?>A?@2><<59=E?@<B?5?9@7:8:?6
+@cluster_588:UMI_ACATGG
+AGTTAGAGTCTCAGTCACCCAGGCTGGAATA
++
+=AE?===A@=D@4AA@=?855A@>;B<@;=5
+@cluster_592:UMI_GCCGTC
+TGTGTCTCTCTGTCCCCAGATCGGAAGAGCA
++
+C?@7B?@?C1@;<;598?883846@?0792@
+@cluster_602:UMI_CTCTCA
+GGTTTCCGCCCCCCAGATCGGAAGAGCACAC
++
+A@DEB<;:>695:@?=<?=//:6+790<<=:
+@cluster_607:UMI_TCCGAC
+GATTAATGAAAACATTCTTGGCAAATGCTTT
++
+@<EC@ABB?CB?>@DB?DCB;:ADAB::>?6
+@cluster_615:UMI_TGGGAC
+TCTAAACCTGGAAATTTATCTGGAGTCTTCC
++
+611@D@0>651@DA6E2.?377>-0?:>B/;
+@cluster_621:UMI_TTCGTC
+GTTTTTTACCCCCTCCCCAGATCGGAAGAGC
++
+@EEEEEC=@:<<>C><<A7<:?=7>@?7=@8
+@cluster_626:UMI_CGCGCA
+CTTTTTTTTTTTAAAAACCCCCAGATCGGAA
++
+?DEEEEEEEEEC@DDD?@<<<A==<?4=>@<
+@cluster_634:UMI_AGATCA
+GTTTTTTTTTTTTCTCTCCTAACACCCCAGA
++
+?EEEEEEEEEEEB?D?D?>@@@?=@<<A;69
+@cluster_648:UMI_CCTATG
+TTTTTTCCCCCCAAGATCGGAAAAACACACC
++
+EEEEEB?<<<<A1?=<?9=:@DDD32121@9
+@cluster_663:UMI_CAAAGG
+TAAGACCCTCATCAATAGATGGAGATATACA
++
+B@?==@<>DA@?AA@C==<BB>==<C?C=?5
+@cluster_672:UMI_GGACGA
+ATTTTGTCTTTTGTTTTCATTTTTTCTTGCT
++
+AEEDB@A?DEEC@BEEBA;EEEEEB?DC:?D
+@cluster_675:UMI_GTATTG
+CAGTTGTCAAATGATCCTTTATTGAAATGTT
++
+:?AEC@BAADABB<??>DEC?ECB@DAB@DB
+@cluster_677:UMI_CCTGGA
+GCACCCCCTCCCAGATCGGAAAAACACACCC
++
+B:=@<<<>D?<A?,<?==>@DDD>?=?=@:>
+@cluster_681:UMI_GGACCC
+AGCTTTGCAACCATACTCCCCCCCCAGATCG
++
+?B?DEC::A@@A@C=?D?<<<<<<A?=<?=B
+@cluster_684:UMI_GTTCAC
+TGCAACCATACTCCCCCCCCCAGATCGGAAT
++
+C::A@=A@C=?D?<3<<<<<A?=;?4.>@A/
+@cluster_689:UMI_CCTTCA
+AAAGAAGTAAGCCTTTATTTCCTTGTTTTGC
++
+DD?=@?AC@?B>>DEC?EEB?>DC@EEEC:;
+@cluster_692:UMI_GCGTCC
+GAGGTGAAGTTTCACTTTGTCCCCAGATCGA
++
+@=@@:?<3@D=A@27DDC7>?<;A?14;2<,
+@cluster_699:UMI_TGTTTC
+CTTTCTTTCTTTCTTTTGTTTCTTTCTTGCT
++
+>DEB?DEB?DEB?DEEC@EEB?DEB?DC:?D
+@cluster_706:UMI_CCACGG
+GCCCTTCTGCTCCCCCAGATCGGAAGAGCAC
++
+@><>DB?C:?D?<<<A?=<?==>@?1=B:=@
+@cluster_714:UMI_ACGCGA
+TTTTTCCCCCCCCCAGATCGAAAAAGCACAC
++
+EEEEA?<<<<<<;8?=<?=@8DD4?:8<><@
+@cluster_716:UMI_GGGGTC
+CCCCCCCCAAAATCGAAAAAACACACCCCTA
++
+<<<<<<;<1C?0.4@/DDA:;>3>8=;626<
+@cluster_719:UMI_GAGAAA
+GGGAGTAGTGTCTTTATTCATTAAAGCCTGA
++
+A=>=AC=AA@B?DEC?EBA@EC@D?B>>CB=
+@cluster_722:UMI_TCCATA
+GTTTTTTTTTTTTTTTTCAGTAAGCACAGGT
++
+AEEEEEEEEEEEEEEEBA?@:@?B:=??A@4
+@cluster_730:UMI_ACCTTG
+TCCCCCCCCCCAAATCGGAAAAACACACCCC
++
+B?<<<<<;<76AB@?=<5@DCD??=>2@;;6
+@cluster_732:UMI_AGGAAG
+CCCCCCCCCAAATCGGAAAAACACACCCCTA
++
+6<<<<<<<AADA?==>@DAD?><?=@:;>@0
+@cluster_756:UMI_TCGATA
+CTTTGTTTCAAGTTTTAATCAAAGCTTGTAT
++
+?DEC@EEBAA?AEEEC@A?AAD?B?DC@C??
+@cluster_764:UMI_ACGACC
+CACGCTTAATTCACTTTATTTTTCCCCAGAT
++
+>=?B?DC@AEBA=?DEC?EEEEB?<<A<=<9
+@cluster_772:UMI_AGGAAA
+AAGACCACAAAGATTTAATTTAAAATCACAG
++
+D?==@A=?AD?=<EEC@AEEC@DDA?A=??B
+@cluster_778:UMI_TTGGGC
+ATTTAACATGAGGAAACCCCAGATCGGAAGA
++
+@EEA@?>@BB;A>@D<@;:64=8?==>@?<6
+@cluster_787:UMI_GCAGTC
+TGATAGCATTGCGAGACGCTGGAGCCGGAGC
++
+CB<C=B:;EC:?@===?B?CB><@>==>6A9
+@cluster_794:UMI_GCATCC
+CCCCCCCAGATCGGAAAAGCACACGCCTGAA
++
+;;9<<<A?=8>===@D;?B:=<=?B:>C><8
+@cluster_799:UMI_CGTGCA
+GCTCGTCTTTCTCCCCCAGATCGGAACAGTA
++
+=.B10486=:2989;58/-4=255::.=684
+@cluster_807:UMI_GATATG
+TTTTTCCACACGTAAAATTTATAAACATTTA
++
+83EEA3:620725;DD5CAB:53C3=/472-
+@cluster_810:UMI_TCTCGC
+GAAGAGCACACGTCTGAACTCCAGTCACCGT
++
+9?<9;@23538<88>@348<396;;365/=4
+@cluster_816:UMI_ATGTAG
+TGAGACAACATCTCACTCTGTTACCCCCCAA
++
+AA===>A?:@>?C@=?C?C@BC3/;<;<A1.
+@cluster_823:UMI_TTTTTA
+CCATTATAATAGCCATCTTTATTTGTAAAAA
++
+?A@EC?C@AC=B>A@??DEC?EEC@C@DDD:
+@cluster_828:UMI_CTCGTA
+GCCCCCCCCCAAATCGGAAAAACACACCCCC
++
+B><<<<<<<AADA?==>@DDD?>=>=@;<<3