Mercurial > repos > rnateam > blockclust
comparison tool_dependencies.xml @ 1:a92d8689aa30 draft
Uploaded
| author | rnateam |
|---|---|
| date | Tue, 08 Jul 2014 11:59:49 -0400 |
| parents | 768a67f6ae18 |
| children | 49e600128a73 |
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| 0:768a67f6ae18 | 1:a92d8689aa30 |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="samtools" version="0.1.19"> | 3 <package name="samtools" version="0.1.19"> |
| 4 <repository changeset_revision="6b6b5498d9a2" name="package_samtools_0_1_19" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" /> | 4 <repository changeset_revision="6b6b5498d9a2" name="package_samtools_0_1_19" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 5 </package> | 5 </package> |
| 6 <package name="R_3_0_1" version="3.0.1"> | 6 <package name="R_3_0_1" version="3.0.1"> |
| 7 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 8 </package> | 8 </package> |
| 9 <package name="eden" version="1.1"> | 9 <package name="eden" version="1.1"> |
| 10 <repository changeset_revision="532625813f2e" name="package_eden_1_1" owner="rnateam" toolshed="http://toolshed.g2.bx.psu.edu" /> | 10 <repository changeset_revision="532625813f2e" name="package_eden_1_1" owner="rnateam" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 11 </package> | 11 </package> |
| 12 <package name="mcl" version="12.135"> | 12 <package name="mcl" version="12.135"> |
| 13 <repository changeset_revision="9f59d1a59999" name="package_mcl_12_135" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu" /> | 13 <repository changeset_revision="9f59d1a59999" name="package_mcl_12_135" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> |
| 14 </package> | 14 </package> |
| 15 <package name="blockclust_rlibs" version="1.0"> | 15 <package name="blockclust_rlibs" version="1.0"> |
| 16 <install version="1.0"> | 16 <install version="1.0"> |
| 17 <actions> | 17 <actions> |
| 18 <action type="setup_r_environment"> | 18 <action type="setup_r_environment"> |
| 19 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="http://toolshed.g2.bx.psu.edu"> | 19 <repository changeset_revision="c5ff6dd33c79" name="package_r_3_0_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> |
| 20 <package name="R_3_0_1" version="3.0.1" /> | 20 <package name="R_3_0_1" version="3.0.1" /> |
| 21 </repository> | 21 </repository> |
| 22 <package>https://github.com/bgruening/download_store/raw/master/blockclust/r-packages/ape_3.0-11.tar.gz</package> | 22 <package>https://github.com/bgruening/download_store/raw/master/blockclust/r-packages/ape_3.0-11.tar.gz</package> |
| 23 <package>https://github.com/bgruening/download_store/raw/master/blockclust/r-packages/plyr_1.8.tar.gz</package> | 23 <package>https://github.com/bgruening/download_store/raw/master/blockclust/r-packages/plyr_1.8.tar.gz</package> |
| 24 <package>https://github.com/bgruening/download_store/raw/master/blockclust/r-packages/digest_0.6.4.tar.gz</package> | 24 <package>https://github.com/bgruening/download_store/raw/master/blockclust/r-packages/digest_0.6.4.tar.gz</package> |