Mercurial > repos > rnateam > blockclust_workflow
comparison blockclust_workflow_complete.ga @ 6:4931116b8470 draft
Uploaded
| author | rnateam |
|---|---|
| date | Tue, 23 Sep 2014 11:09:25 -0400 |
| parents | 47a0bcb1188d |
| children | f320021d07e1 |
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| 5:47a0bcb1188d | 6:4931116b8470 |
|---|---|
| 1 { | 1 { |
| 2 "a_galaxy_workflow": "true", | 2 "a_galaxy_workflow": "true", |
| 3 "annotation": "", | 3 "annotation": "", |
| 4 "format-version": "0.1", | 4 "format-version": "0.1", |
| 5 "name": "imported: BlockClustWorkflow_complete", | 5 "name": "BlockClustWorkflow_complete", |
| 6 "steps": { | 6 "steps": { |
| 7 "0": { | 7 "0": { |
| 8 "annotation": "", | 8 "annotation": "", |
| 9 "id": 0, | 9 "id": 0, |
| 10 "input_connections": {}, | 10 "input_connections": {}, |
| 16 ], | 16 ], |
| 17 "name": "Input dataset", | 17 "name": "Input dataset", |
| 18 "outputs": [], | 18 "outputs": [], |
| 19 "position": { | 19 "position": { |
| 20 "left": 240, | 20 "left": 240, |
| 21 "top": 349.5 | 21 "top": 380.5 |
| 22 }, | 22 }, |
| 23 "tool_errors": null, | 23 "tool_errors": null, |
| 24 "tool_id": null, | 24 "tool_id": null, |
| 25 "tool_state": "{\"name\": \"Input BAM file\"}", | 25 "tool_state": "{\"name\": \"Input BAM file\"}", |
| 26 "tool_version": null, | 26 "tool_version": null, |
| 72 "type": "pdf" | 72 "type": "pdf" |
| 73 } | 73 } |
| 74 ], | 74 ], |
| 75 "position": { | 75 "position": { |
| 76 "left": 469.5, | 76 "left": 469.5, |
| 77 "top": 306.5 | 77 "top": 337.5 |
| 78 }, | 78 }, |
| 79 "post_job_actions": { | 79 "post_job_actions": { |
| 80 "HideDatasetActioncluster_dist": { | 80 "HideDatasetActioncluster_dist": { |
| 81 "action_arguments": {}, | 81 "action_arguments": {}, |
| 82 "action_type": "HideDatasetAction", | 82 "action_type": "HideDatasetAction", |
| 142 "type": "input" | 142 "type": "input" |
| 143 } | 143 } |
| 144 ], | 144 ], |
| 145 "position": { | 145 "position": { |
| 146 "left": 763, | 146 "left": 763, |
| 147 "top": 338 | 147 "top": 369 |
| 148 }, | 148 }, |
| 149 "post_job_actions": { | 149 "post_job_actions": { |
| 150 "HideDatasetActionout_file1": { | 150 "HideDatasetActionout_file1": { |
| 151 "action_arguments": {}, | 151 "action_arguments": {}, |
| 152 "action_type": "HideDatasetAction", | 152 "action_type": "HideDatasetAction", |
| 177 "type": "tabular" | 177 "type": "tabular" |
| 178 } | 178 } |
| 179 ], | 179 ], |
| 180 "position": { | 180 "position": { |
| 181 "left": 984.5, | 181 "left": 984.5, |
| 182 "top": 286.5 | 182 "top": 317.5 |
| 183 }, | 183 }, |
| 184 "post_job_actions": { | 184 "post_job_actions": { |
| 185 "HideDatasetActionoutput": { | 185 "HideDatasetActionoutput": { |
| 186 "action_arguments": {}, | 186 "action_arguments": {}, |
| 187 "action_type": "HideDatasetAction", | 187 "action_type": "HideDatasetAction", |
| 249 "type": "pdf" | 249 "type": "pdf" |
| 250 } | 250 } |
| 251 ], | 251 ], |
| 252 "position": { | 252 "position": { |
| 253 "left": 1287.5, | 253 "left": 1287.5, |
| 254 "top": 328.5 | 254 "top": 359.5 |
| 255 }, | 255 }, |
| 256 "post_job_actions": { | 256 "post_job_actions": { |
| 257 "HideDatasetActioncluster_dist": { | 257 "HideDatasetActioncluster_dist": { |
| 258 "action_arguments": {}, | 258 "action_arguments": {}, |
| 259 "action_type": "HideDatasetAction", | 259 "action_type": "HideDatasetAction", |
| 299 "type": "input" | 299 "type": "input" |
| 300 } | 300 } |
| 301 ], | 301 ], |
| 302 "position": { | 302 "position": { |
| 303 "left": 1588, | 303 "left": 1588, |
| 304 "top": 266 | 304 "top": 297 |
| 305 }, | 305 }, |
| 306 "post_job_actions": { | 306 "post_job_actions": { |
| 307 "HideDatasetActionout_file1": { | 307 "HideDatasetActionout_file1": { |
| 308 "action_arguments": {}, | 308 "action_arguments": {}, |
| 309 "action_type": "HideDatasetAction", | 309 "action_type": "HideDatasetAction", |
| 343 "type": "tabular" | 343 "type": "tabular" |
| 344 } | 344 } |
| 345 ], | 345 ], |
| 346 "position": { | 346 "position": { |
| 347 "left": 1880, | 347 "left": 1880, |
| 348 "top": 329.5 | 348 "top": 360.5 |
| 349 }, | 349 }, |
| 350 "post_job_actions": { | 350 "post_job_actions": { |
| 351 "HideDatasetActionmultiple_alignment_output": { | 351 "HideDatasetActionmultiple_alignment_output": { |
| 352 "action_arguments": {}, | 352 "action_arguments": {}, |
| 353 "action_type": "HideDatasetAction", | 353 "action_type": "HideDatasetAction", |
| 370 "annotation": "", | 370 "annotation": "", |
| 371 "id": 7, | 371 "id": 7, |
| 372 "input_connections": { | 372 "input_connections": { |
| 373 "tool_mode|clusters_bed": { | 373 "tool_mode|clusters_bed": { |
| 374 "id": 4, | 374 "id": 4, |
| 375 "output_name": "model_based_pred_bed" | 375 "output_name": "clusters" |
| 376 }, | 376 }, |
| 377 "tool_mode|cmsearch_out": { | 377 "tool_mode|cmsearch_out": { |
| 378 "id": 6, | 378 "id": 6, |
| 379 "output_name": "outfile" | 379 "output_name": "outfile" |
| 380 }, | 380 }, |
| 419 "type": "pdf" | 419 "type": "pdf" |
| 420 } | 420 } |
| 421 ], | 421 ], |
| 422 "position": { | 422 "position": { |
| 423 "left": 2184.5, | 423 "left": 2184.5, |
| 424 "top": 372.5 | 424 "top": 403.5 |
| 425 }, | 425 }, |
| 426 "post_job_actions": { | 426 "post_job_actions": { |
| 427 "HideDatasetActionclusters": { | 427 "HideDatasetActionclusters": { |
| 428 "action_arguments": {}, | 428 "action_arguments": {}, |
| 429 "action_type": "HideDatasetAction", | 429 "action_type": "HideDatasetAction", |