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annotate test-data/3.alignment.cons.tsv @ 0:8778478a754f draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AggregateAlignments commit 4406735e44aba20859c252be39f4e99df28c7a92
author rnateam
date Sat, 27 Oct 2018 13:20:46 -0400
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8778478a754f planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AggregateAlignments commit 4406735e44aba20859c252be39f4e99df28c7a92
rnateam
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1 Background model Columns Combinations/Pair Consensus MFE Covariance contribution Decision model Energy contribution G+C content Mean pairwise identity Mean single sequence MFE Mean z-score Prediction Reading direction SVM RNA-class probability SVM decision value Sequences Shannon entropy Structure conservation index alignment multihit per_species num_human_seqs_all num_seqs num_seqs_all # seqId basePairCount beginPos bgCykProb bgProb cykScore endPos fold posScore score strCykProb strPostProb strProb rscape_#target_E-val rscape_Found rscape_MSA rscape_PPV rscape_SEN rscape_TP rscape_True rscape_alen rscape_avgid rscape_method rscape_nseq rscape_out cluster_bed cluster_human_ids cluster_human_loc
8778478a754f planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AggregateAlignments commit 4406735e44aba20859c252be39f4e99df28c7a92
rnateam
parents:
diff changeset
2 0 dinucleotide 70 1.0 -14.41 0.0 structural RNA alignment quality -14.41 0.5 99.1 -14.54 -0.06 OTHER forward 0.012596 -1.62 19.0 0.0255 0.99 cluster.aln 0 1 19 19 0.05 0 result.aln_1 0.0 0.0 0 20 70 99.1 GTp 19 RESULTS/result.aln.sum "chr7 27164936 27165005 cluster-X 0 -" SEQ1_526_595_+ 1714-1783