Mercurial > repos > rnateam > graphclust_align_cluster
comparison test-data/alignment2b-transcript.fa @ 0:c05c83b3ef0f draft
planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AlignCluster commit 4406735e44aba20859c252be39f4e99df28c7a92
| author | rnateam |
|---|---|
| date | Sat, 27 Oct 2018 13:21:39 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:c05c83b3ef0f |
|---|---|
| 1 >hg38_chr7_27162434_27166719_- Hoxa9-Xtend5UTR | |
| 2 GTTCCGGAGCTGCGGGGTCTCTTAGGCGAGGCTGCCTTTTCCCAAACCGAACTTGCCTTC | |
| 3 CATTCATGCCACTTGTAGTTTTTTCCCCAGCTGGGATTCACGGAGCGCAACCAGGCTTGC | |
| 4 AGCGCTCATGGTTAGAGCCTCTGAGGCTGGAGCACAGGGCTGGGTCGCCAGCCGCCTGCG | |
| 5 CCTGGGAATCCTGATTGCCAGCTGATGAGAAAGGCGGGCTGGGCGCGCGTGTGCGTGGGG | |
| 6 TCGAGGGCCGGGGACCGAGCGCGCCGCACAACCAACCAGGCCCTCAAAACCTTCGCCCTG | |
| 7 GTGGCGGCTGGCCGCTCCCTCCTGGCCAGCTCCTCCGTGGGGTCCTCGTAGCAAAGGCGA | |
| 8 ATTTAAGGGTTGCCCGGGCGCCCCTCGCTCCAGGCGGGTAGCTGTGGGGACCTACACCCG | |
| 9 CGGTACTCCCTGAGCGGCCGGTCCCTGCCTGGAGTGCCCTGGTAGGGCCGGCGGCGGCTC | |
| 10 CGTTTGGGACGGATCCTGCGTTGAATTTGACTTTTCGAGGGCGGCCGCGGGTAAACTCGC | |
| 11 CTCTCCCGGGGACCGCAGGGATTATTTACAGGGAGCTCGCCAACCAAACACAACAGTCTA | |
| 12 ACCTTTCCAAGTCCTCGTAAATTTTTACAGCTGGGAGCCACGGCGAGGCAAACGAATCTG | |
| 13 TTGGTCGTTTCCGACTTCCCGCCAGCCTGTGTGGCTTCTGAAACAATAACTCCTTATGAA | |
| 14 ATATCATAAATATAGATTTAAATACAGTAGAGCGACAATGCGATTTGGCTGCTTTTTTAT | |
| 15 GGCTTCAATTATTGTCTAATTTTATGTGAGGGGCTCCGCTGGCCGCACTCGCACGCGGGA | |
| 16 CCCGCGCCTTCTTGATGGCGTGATTAATTGTGATATAAAATAGTCCGCTTAAGAAGTGTG | |
| 17 TGTATGGGGGGGGAGACGGGAGAGTACAGAGACAAGGCTAGATTTGATCTTTTAATCGTC | |
| 18 GTTGGCCACAATTAAAACAAACCCCATCGTAGAGCGGCACGATCCCTTTACATAAAAACA | |
| 19 TATGGCTTTTGCTATAAAAATTATGACTGCAAAACATCGGACCATTAATAGCGTGCGGAG | |
| 20 TGATTTACGCGTTATTGTTCTGCTGGACGGGCACGTGACGCGCACGGCCAATGGGGGCGC | |
| 21 GGGCGCCGGCAACTTATTAGGTGACTGTACTTCCCCCCCGGTGCCACCAAGTTGTTACAT | |
| 22 GAAATCTGCAGTTTCATAATTTCCGTGGGTCGGGCCGGGCGGGCCAGGCGCTGGGCACGG | |
| 23 TGATGGCCACCACTGGGGCCCTGGGCAACTACTACGTGGACTCGTTCCTGCTGGGCGCCG | |
| 24 ACGCCGCGGATGAGCTGAGCGTTGGCCGCTATGCGCCGGGGACCCTGGGCCAGCCTCCCC | |
| 25 GGCAGGCGGCGACGCTGGCCGAGCACCCCGACTTCAGCCCGTGCAGCTTCCAGTCCAAGG | |
| 26 CGACGGTGTTTGGCGCCTCGTGGAACCCAGTGCACGCGGCGGGCGCCAACGCTGTACCCG | |
| 27 CTGCGGTGTaccaccaccatcaccaccacccctacgtgcacccccaggcgcccgtggcgg | |
| 28 cggcggcgccggacggcAGGTACATGCGCTCCTGGCTGGAGCCCACGCCCGGTGCGCTCT | |
| 29 CCTTCGCGGGCTTGCCCTCCAGCCGGCCTTATGGCATTAAACCTGAACCGCTGTCGGCCA | |
| 30 GAAGGGGTGACTGTCCCACGCTTGACACTCACACTTTGTCCCTGACTGACTATGCTTGTG | |
| 31 GTTCTCCTCCAGTTGATAGAGAAAAACAACCCAGCGAAGGCGCCTTCTCTGAAAACAATG | |
| 32 CTGAGAATGAGAGCGGCGGAGACAAGCCCCCCATCGATCCCAGTAAGTGTCTCCTCCCTT | |
| 33 CAAATCCGCCGCCGCCTCCACGCCGGCCTCCCGGATCTGCTGGCCCGCCAGGTTTCTCTC | |
| 34 GAGCCTGCCTTCGTCCTCGCTGGAAGCCTCTCGAGTTGGGGCCAGGAGCCAGAAGTTGGT | |
| 35 GTTTGGGACGCCTCAGATAGGGCCCCAAGTCTGGAGAGCAGTGAAGAGCGGCCCGCAGGG | |
| 36 CTACGGGAGAGGAGGCGGCTGCTGCAGCGAGAGGGGGCGGGGCGGGCACTTCGGGACGAG | |
| 37 CCAAGACTGGCCGCCCCTCTCCTTGGCTGCCCAGGCCCAGGACCGAGATACTTTGGGCCG | |
| 38 TTCTTCGAAAGCAGTGCAGCCCAGAGAGCCTTTTGTACAACTAGATTGTCCGTGAGCGGC | |
| 39 GGCAGCCAGGGCAGCCGGAGCTGGGACGCTGGGGGAGACGGCCGATTCCTTCCACTTCTT | |
| 40 GCCTTCGGCCAGTGGCGGCGTAAATCCTGCCAAGATGAGGCTGCGGGCGACCCGGGCCAC | |
| 41 AAGGGTCCCCATGACAGATTATTCAAATAAGCCACAGACGTGATCAGCGGCCTTAGGGCG | |
| 42 CCCTGACGGCTTGCCCAGCTCCGAAGGCCTTCCAGGAAGGTTAAATAAGGAGTGGGGGGC | |
| 43 GTAGAGGGACAGGTTGGGAAAGAAAGACGAAGTCAGTGAACGGGACAGAGGAATCCTAAT | |
| 44 CTTGCTACAGAACACAAGGCAGCATGCTTTCCCTCTGCGTGGCAAGGAGACCTGTTTCCA | |
| 45 AATTTCATTCTATACAGCGTTTTGAGAGTGGGAGGAAGGAGAAGGGGGACAAGAGGACAG | |
| 46 AGTAGGAGAAAGGAAGGTCTCGGAGGGGAGGGCGAGCCAAAGTTTTACTGCGTGCAATTT | |
| 47 TAAGTGACTGTCTGTGCGTCTGTCTGCCAGGGTTCCATTGTGTCCGAGGCCTGACTGCCT | |
| 48 TTCCTAACCAGTTCAGCAGAGTTCTGCACTTCGGCCAGAGACCCCATGCAGGAGGCTCAT | |
| 49 TTGCCCCAGCGGGATGTGCGTCTTCTGCTCCTAAACCCAGTGTTTCTCTTCCCCGCAGAT | |
| 50 AACCCAGCAGCCAACTGGCTTCATGCGCGCTCCACTCGGAAAAAGCGGTGCCCCTATACA | |
| 51 AAACACCAGACCCTGGAACTGGAGAAAGAGTTTCTGTTCAACATGTACCTCACCAGGGAC | |
| 52 CGCAGGTACGAGGTGGCTCGACTGCTCAACCTCACCGAGAGGCAGGTCAAGATCTGGTTC | |
| 53 CAGAACCGCAGGATGAAAATGAAGAAAATCAACAAAGACCGAGCAAAAGACGAGTGATGC | |
| 54 CATTTGGGCTTATTTAGAAAAAAGGGTAAGCTAGAGAGAAAAAGAAAGAACTGTCCGTCC | |
| 55 CCCTTCCGCCTTCTCCCTTCTCTCACCCCCACCCTAGCCTCCACCATCCCCGCACAAAGC | |
| 56 GGCTCTAAACCTCAGGCCACATCTTTTCCAAGGCAAACCCTGTTCAGGCTGGCTCGTAGG | |
| 57 CCTGCCGCTTTGATGGAGGAGGTATTGTAAGCTTTCCATTTTCTATAAGAAAAAGGAAAA | |
| 58 GTTGAGGGGGGGGCATTAGTGCTGATAGCTGTGTGTGTTAGCTTGTATATATATTTTTAA | |
| 59 AAATCTACCTGTTCCTGACTTAAAACAAAAGGAAAGAAACTACCTTTTTATAATGCACAA | |
| 60 CTGTTGATGGTAGGCTGTATAGTTTTTAGTCTGTGTAGTTAATTTAATTTGCAGTTTGTG | |
| 61 CGGCAGATTGCTCTGCCAAGATACTTGAACACTGTGTTTTATTGTGGTAATTATGTTTTG | |
| 62 TGATTCAAACTTCTGTGTACTGGGTGATGCACCCATTGTGATTGTGGAAGATAGAATTCA | |
| 63 ATTTGAACTCAGGTTGTTTATGAGGGGAAAAAAACAGTTGCATAGAGTATAGCTCTGTAG | |
| 64 TGGAATATGTCTTCTGTATAACTAGGCTGTTAACCTATGATTGTAAAGTAGCTGTAAGAA | |
| 65 TTTCCCAGTGAAATAAAAAAAAATTTTAAGTGTTCTCGGGGATGCATAGATTCATCATTT | |
| 66 TCTCCACCTTAAAAATGCGGGCATTTAAGTCTGTCCATTATCTATATAGTCCTGTCTTGT | |
| 67 CTATTGTATATATAATCTATATGATTAAAGAAAATATGCATAATCAGACAAGCTTGAATA | |
| 68 TTGTTTTTGCACCAGACGAACAGTGAGGAAATTCGGAGCTATACATATGTGCAGAAGGTT | |
| 69 ACTACCTAGGGTTTATGCTTAATTTTAATTGGAGGAAATGAATGCTGATTGTAACGGAGT | |
| 70 TAATTTTATTGATAATAAATTATACACTATGAAACCGCCATTGGGCTACTGTAGATTTGT | |
| 71 ATCCTTGATGAATCTGGGGTTTCCATCAGACTGAACTTACACTGTATATTTTGCAATAGT | |
| 72 TACCTCAAGGCCTACTGACCAAATTGTTGTGTTGAGATGATATTTAACTTTTTGCCAAAT | |
| 73 AAAATATATTGATTCTTTTCTATTTT |