# HG changeset patch
# User rnateam
# Date 1631477506 0
# Node ID 40371e8b6ee27cb1fb504a133e8d7ef5b1ada7b9
# Parent  953353eacec260f61b17edcbbe9629cfbc56aaba
"planemo upload for repository https://github.com/bgruening/galaxytools/tools/GraphClust/AlignCluster commit 6f9cc1c762abc9a45af9c459bd2603426148a369-dirty"

diff -r 953353eacec2 -r 40371e8b6ee2 align_cluster.xml
--- a/align_cluster.xml	Sun Oct 28 18:52:14 2018 -0400
+++ b/align_cluster.xml	Sun Sep 12 20:11:46 2021 +0000
@@ -102,12 +102,12 @@
           <when value="yes" >
               <param format="fasta" name="transcript_loci_fasta" type="data" label="Loci reference sequence"
                 help="Sequence of reference species (human) for the genomic loci (precursor mRNA/lncRNA) to locate the clusters" />
-              <param name='transcript_loci_bed' type="text" value="chr1 0 100000 gene 0 +" 
+              <param name='transcript_loci_bed' type="txt" value="chr1 0 100000 gene 0 +" 
                 help="bed entry string of the reference transcript loci for bed/ucsc-track output. 'chrom start end name score strand' white-space separated.">
                 <validator type="regex" message="one-line bed string must have at least 6 entries as BED6 format (chrom start end name 0 strand) 
                 (space and tab allowed)">^\S+\s+[0-9]+\s+[0-9]+\s+\S+\s+\S+\s+[-+]\s*$</validator> 
               </param>
-              <param name='genome_version' value="hg38" type="text" label="reference genome assembly"
+              <param name='genome_version' value="hg38" type="txt" label="reference genome assembly"
                 help="ucsc reference genome assembly version used in the input MAF alignments (e.g. hg38, hg19, mm10). To identify the reference in clusters">
                   <validator type="regex" message="ucsc genome assembly version has an alphabet prefix and a number suffix">^[a-zA-Z]+[0-9]+$</validator> 
               </param>