Mercurial > repos > rnateam > graphclust_fasta_to_gspan
comparison fasta2shrep_gspan.xml @ 5:8641b7be8757 draft
planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/branchForIterations/tools/GraphClust/GSPAN commit b'7e5cd452018ae9507c2d1cd13dd688a747550393\n'
| author | rnateam |
|---|---|
| date | Fri, 17 Mar 2017 08:28:05 -0400 |
| parents | aae41396646e |
| children | fcb1bb6dc0f9 |
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| 4:aae41396646e | 5:8641b7be8757 |
|---|---|
| 1 <tool id="gspan" name="fasta_to_gspan" version="0.1"> | 1 <tool id="gspan" name="fasta_to_gspan" version="0.1"> |
| 2 <requirements> | 2 <requirements> |
| 3 <requirement type="package" version="0.1.10">graphclust-wrappers</requirement> | 3 <requirement type="package" version="0.1.11">graphclust-wrappers</requirement> |
| 4 <requirement type="package" version="2.1.6">rnashapes</requirement> | 4 <requirement type="package" version="2.1.6">rnashapes</requirement> |
| 5 </requirements> | 5 </requirements> |
| 6 <stdio> | 6 <stdio> |
| 7 <exit_code range="1:" /> | 7 <exit_code range="1:" /> |
| 8 </stdio> | 8 </stdio> |
| 9 <command> | 9 <command> |
| 10 <![CDATA[ | 10 <![CDATA[ |
| 11 fasta2shrep_gspan.pl | 11 fasta2shrep_gspan.pl |
| 12 --fasta '$dataFasta' | 12 --fasta '$dataFasta' |
| 13 $i_crop_unpaired_ends | 13 $i_crop_unpaired_ends |
| 14 $i_abstr | 14 $i_abstr |
| 15 $i_stacks | 15 $i_stacks |
| 16 -t '3=0,5=80' | 16 -t '3=0,5=80' |