Mercurial > repos > rnateam > graphclust_nspdk
comparison NSPDK_candidateClusters.xml @ 9:1b142e88d068 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/GraphClust/NSPDK commit 89078a214cefd31d28da75ddebb21f546fba79df
| author | bgruening |
|---|---|
| date | Tue, 18 Jun 2019 12:43:50 -0400 |
| parents | 90da74fd1c5c |
| children |
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| 8:90da74fd1c5c | 9:1b142e88d068 |
|---|---|
| 1 <tool id="NSPDK_candidateClust" name="NSPDK_candidateClusters" version="9.2.3" > | 1 <tool id="NSPDK_candidateClust" name="NSPDK_candidateClusters" version="9.2.3.1" > |
| 2 <requirements> | 2 <requirements> |
| 3 <requirement type="package" version="0.6.0">graphclust-wrappers</requirement> | 3 <requirement type="package" version="0.6.0">graphclust-wrappers</requirement> |
| 4 <requirement type="package" version="9.2" >nspdk</requirement> | 4 <requirement type="package" version="9.2" >nspdk</requirement> |
| 5 </requirements> | 5 </requirements> |
| 6 <stdio> | 6 <stdio> |
| 10 <![CDATA[ | 10 <![CDATA[ |
| 11 | 11 |
| 12 mkdir ./SVECTOR && | 12 mkdir ./SVECTOR && |
| 13 | 13 |
| 14 #for $ins in $data_svector: | 14 #for $ins in $data_svector: |
| 15 ln -f -s '$ins' ./SVECTOR/$ins.element_identifier && | 15 ln -f -s '$ins' ./SVECTOR/${ins.element_identifier}.gspan && |
| 16 #end for | 16 #end for |
| 17 | 17 |
| 18 NSPDK_candidateClusters.pl | 18 NSPDK_candidateClusters.pl |
| 19 '$data_fasta' | 19 '$data_fasta' |
| 20 '$data_names' | 20 '$data_names' |