comparison splitSHAPE.py @ 8:a04e93fdb40a draft

planemo upload for repository https://github.com/eteriSokhoyan/galaxytools/tree/branchForIterations/tools/GraphClust commit 9a3dc91fa984be18fabc0d968360634d787c9589
author rnateam
date Wed, 24 May 2017 09:57:18 -0400
parents 07ad2d77f28a
children 0690d59881b9
comparison
equal deleted inserted replaced
7:07ad2d77f28a 8:a04e93fdb40a
54 chunks = re.findall(r'\d+', seq_string[i]) 54 chunks = re.findall(r'\d+', seq_string[i])
55 55
56 for j in react_val[int(chunks[1])-1:int(chunks[2])]: 56 for j in react_val[int(chunks[1])-1:int(chunks[2])]:
57 id_s = int(j.split()[0]) 57 id_s = int(j.split()[0])
58 58
59 if id_s > win_size: 59
60 id_s = id_s - int(chunks[1]) 60 id_s = id_s - int(chunks[1]) + 1
61 toWrite += str(id_s) + '\t' + j.split()[1] + "\n" 61 toWrite += str(id_s) + '\t' + j.split()[1] + "\n"
62 62
63 with open("shape_data_split.react", 'w') as out: 63 with open("shape_data_split.react", 'w') as out:
64 out.write(toWrite) 64 out.write(toWrite)