Mercurial > repos > rnateam > hmmv
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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/cmv commit 108e83ea251bee3b952cb49ef758e69294608c1d
| author | rnateam |
|---|---|
| date | Wed, 02 Jan 2019 10:09:30 -0500 |
| parents | 159092b83639 |
| children |
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INFERNAL1/a [1.1 | October 2013] NAME Hammerhead_HH9 ACC RF02275 STATES 240 NODES 65 CLEN 77 W 103 ALPH RNA RF no CONS yes MAP yes DATE Fri Feb 28 01:30:52 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM PBEGIN 0.05 PEND 0.05 WBETA 1e-07 QDBBETA1 1e-07 QDBBETA2 1e-15 N2OMEGA 1.52588e-05 N3OMEGA 1.52588e-05 ELSELF -0.08926734 NSEQ 33 EFFN 1.567017 CKSUM 796486396 NULL 0.000 0.000 0.000 0.000 GA 52.00 TC 52.40 NC 51.90 EFP7GF -8.3103 0.71890 ECMLC 0.69960 -5.09380 2.60784 1600000 262533 0.004571 ECMGC 0.43156 -15.39797 -3.48915 1600000 68246 0.005861 ECMLI 0.73853 -2.62455 4.04692 1600000 165569 0.007248 ECMGI 0.51255 -9.59123 -0.17571 1600000 49879 0.008019 CM [ ROOT 0 ] - - - - - - S 0 -1 0 1 4 0 1 103 135 -6.791 -6.998 -0.308 -2.513 IL 1 1 2 1 4 4 30 105 138 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 2 2 3 2 3 3 30 105 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 1 ] 1 - u - - - ML 3 2 3 5 3 3 29 103 136 -7.602 -0.027 -6.257 -0.234 -0.123 -0.914 0.766 D 4 2 3 5 3 1 26 101 134 -7.290 -2.048 -0.412 IL 5 5 3 5 3 3 29 104 137 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 2 ] 2 - u - - - ML 6 5 3 8 3 2 28 102 135 -7.645 -0.026 -6.299 -0.229 -0.080 -0.850 0.719 D 7 5 3 8 3 1 25 100 133 -7.141 -0.628 -1.532 IL 8 8 3 8 3 2 28 103 135 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 3 ] 3 - g - - - ML 9 8 3 11 3 1 27 101 134 -8.220 -0.291 -2.481 0.177 -0.839 0.571 -0.278 D 10 8 3 11 3 0 24 99 132 -5.620 -0.734 -1.403 IL 11 11 3 11 3 2 28 101 134 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 4 ] - 84 - u - - MR 12 11 3 14 3 3 29 100 133 -7.954 -0.025 -6.271 0.090 -0.349 -0.887 0.687 D 13 11 3 14 3 0 22 97 130 -7.578 -2.756 -0.240 IR 14 14 3 14 3 2 28 100 133 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 5 ] - 83 - a - - MR 15 14 3 17 3 2 28 99 132 -7.954 -0.025 -6.271 0.182 -0.063 -0.261 0.103 D 16 14 3 17 3 0 22 97 130 -7.578 -1.489 -0.647 IR 17 17 3 17 3 2 27 99 132 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 6 ] - 82 - a - - MR 18 17 3 20 3 2 28 98 131 -8.058 -0.023 -6.376 0.400 -0.418 -0.083 -0.018 D 19 17 3 20 3 0 21 95 128 -7.241 -2.419 -0.310 IR 20 20 3 20 3 2 27 98 131 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 7 ] - 81 - u - - MR 21 20 3 23 3 2 27 97 130 -8.058 -0.023 -6.376 0.287 -0.181 -0.578 0.297 D 22 20 3 23 3 0 21 94 127 -7.241 -2.419 -0.310 IR 23 23 3 23 3 2 26 97 130 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 8 ] - 80 - a - - MR 24 23 3 26 3 2 27 96 129 -8.058 -0.023 -6.376 0.651 -0.505 -0.299 -0.132 D 25 23 3 26 3 0 20 93 126 -7.241 -2.419 -0.310 IR 26 26 3 26 3 1 26 96 129 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 9 ] - 79 - g - - MR 27 26 3 29 3 2 26 95 128 -8.058 -0.023 -6.376 0.106 -0.685 0.234 0.170 D 28 26 3 29 3 0 20 93 125 -7.241 -2.419 -0.310 IR 29 29 3 29 3 1 25 95 128 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 10 ] - 78 - a - - MR 30 29 3 32 3 2 25 94 127 -8.058 -0.023 -6.376 0.761 -0.594 -0.542 -0.065 D 31 29 3 32 3 0 20 92 125 -7.241 -2.419 -0.310 IR 32 32 3 32 3 1 24 94 127 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 11 ] - 77 - a - - MR 33 32 3 35 3 1 25 93 126 -8.058 -0.023 -6.376 0.768 -1.014 0.040 -0.369 D 34 32 3 35 3 0 19 92 124 -7.241 -0.661 -1.471 IR 35 35 3 35 3 1 23 93 126 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 12 ] - 76 - u - - MR 36 35 3 38 5 1 24 92 125 -6.968 -0.043 -6.783 -6.995 -7.887 -0.230 -0.756 -0.646 0.938 D 37 35 3 38 5 0 17 90 123 -5.352 -0.707 -2.978 -4.409 -2.404 IR 38 38 3 38 5 1 21 92 125 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 13 ] 4 75 g c - - MP 39 38 3 43 6 2 25 91 124 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -2.590 -2.180 -1.964 1.850 -2.759 -3.476 1.187 -2.998 -2.797 2.192 -3.287 0.312 0.916 -2.754 -0.463 -1.764 ML 40 38 3 43 6 1 19 89 122 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 41 38 3 43 6 1 19 89 122 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 42 38 3 43 6 0 15 86 119 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 43 43 5 43 6 1 21 90 123 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 44 44 6 44 5 1 21 90 123 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 14 ] 5 74 G C - - MP 45 44 6 49 6 2 24 89 122 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -4.253 -2.836 -4.324 0.557 -4.803 -4.534 -0.228 -4.617 -4.028 3.497 -4.405 -0.223 -0.550 -4.133 -2.239 -3.215 ML 46 44 6 49 6 1 19 87 120 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 47 44 6 49 6 1 18 87 120 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 48 44 6 49 6 0 15 84 117 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 49 49 5 49 6 1 20 88 121 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 50 50 6 50 5 1 20 88 121 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 15 ] 6 73 C G - - MP 51 50 6 55 6 2 23 87 120 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 52 50 6 55 6 1 18 85 118 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 53 50 6 55 6 1 18 85 118 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 54 50 6 55 6 0 14 82 115 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 55 55 5 55 6 1 20 86 119 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 56 56 6 56 5 1 20 86 119 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 16 ] 7 72 C G - - MP 57 56 6 61 6 2 21 85 118 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -3.856 -3.773 -2.271 -0.203 -3.042 -4.470 3.435 -3.702 -3.874 0.101 -4.273 -1.830 0.571 -4.056 -0.830 -2.814 ML 58 56 6 61 6 1 18 84 116 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 59 56 6 61 6 1 16 83 116 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 60 56 6 61 6 0 14 81 114 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 61 61 5 61 6 1 19 84 117 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 62 62 6 62 5 1 19 84 117 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 17 ] 8 71 g u - - MP 63 62 6 67 4 2 19 83 116 -4.765 -6.998 -0.102 -5.412 -2.697 -1.788 -2.960 1.337 -3.159 -3.556 0.836 -3.099 -2.727 1.766 -1.214 2.166 0.520 -3.064 -0.980 -1.882 ML 64 62 6 67 4 1 17 82 115 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 65 62 6 67 4 1 15 82 114 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 66 62 6 67 4 0 14 80 113 -4.568 -4.250 -2.265 -0.520 IL 67 67 5 67 4 1 18 83 116 -1.835 -2.518 -0.960 -5.004 0.000 0.000 0.000 0.000 IR 68 68 6 68 3 1 18 83 116 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 18 ] 10 - U - - - ML 69 68 6 71 3 1 18 81 114 -7.819 -0.023 -6.474 -1.223 -1.267 -1.942 1.534 D 70 68 6 71 3 0 13 79 112 -6.174 -1.687 -0.566 IL 71 71 3 71 3 1 17 82 115 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 19 ] 11 - U - - - ML 72 71 3 74 3 1 17 80 113 -7.819 -0.023 -6.474 -1.223 -1.267 -1.942 1.534 D 73 71 3 74 3 0 13 78 111 -6.174 -1.687 -0.566 IL 74 74 3 74 3 1 16 81 114 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 20 ] 12 - A - - - ML 75 74 3 77 3 1 17 79 112 -7.819 -0.023 -6.474 1.503 -1.738 -1.177 -1.240 D 76 74 3 77 3 0 12 77 110 -6.174 -1.687 -0.566 IL 77 77 3 77 3 1 16 80 113 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 21 ] 13 - C - - - ML 78 77 3 80 3 1 16 78 111 -8.220 -0.021 -6.537 -1.396 1.516 -2.205 -0.881 D 79 77 3 80 3 0 11 76 109 -5.620 -0.734 -1.403 IL 80 80 3 80 3 1 15 78 111 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 22 ] - 70 - C - - MR 81 80 3 83 3 1 16 77 110 -8.220 -0.021 -6.537 -0.799 1.038 -1.595 0.058 D 82 80 3 83 3 0 10 75 108 -6.390 -1.568 -0.620 IR 83 83 3 83 3 1 14 77 110 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 23 ] - 69 - A - - MR 84 83 3 86 3 1 15 76 109 -8.220 -0.021 -6.537 1.648 -2.082 -1.743 -1.597 D 85 83 3 86 3 0 9 74 107 -6.390 -1.568 -0.620 IR 86 86 3 86 3 1 14 76 109 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 24 ] - 68 - U - - MR 87 86 3 89 5 1 15 75 108 -6.968 -0.043 -6.783 -6.995 -7.887 -1.223 -1.267 -1.942 1.534 D 88 86 3 89 5 0 8 73 106 -5.352 -0.707 -2.978 -4.409 -2.404 IR 89 89 3 89 5 1 12 75 108 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 25 ] 14 67 C G - - MP 90 89 3 94 6 2 16 74 107 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 91 89 3 94 6 1 10 72 105 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 92 89 3 94 6 1 10 72 105 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 93 89 3 94 6 0 6 69 102 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 94 94 5 94 6 1 11 73 106 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 95 95 6 95 5 1 12 73 106 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 26 ] 15 66 U A - - MP 96 95 6 100 6 2 15 72 105 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -3.898 -3.712 -3.767 -0.030 -2.775 -4.358 1.546 -3.449 -3.776 0.273 -4.163 -1.620 3.167 -4.059 -0.458 -2.627 ML 97 95 6 100 6 1 10 70 103 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 98 95 6 100 6 1 10 70 103 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 99 95 6 100 6 0 6 67 100 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 100 100 5 100 6 1 11 71 104 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 101 101 6 101 5 1 11 71 104 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 27 ] 16 65 G C - - MP 102 101 6 106 6 2 15 70 103 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -3.732 -2.590 -3.763 1.442 -4.162 -4.378 0.313 -4.046 -3.690 3.177 -4.112 -0.237 -0.013 -3.778 -1.669 -2.665 ML 103 101 6 106 6 1 9 68 101 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 104 101 6 106 6 1 9 68 101 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 105 101 6 106 6 0 6 65 98 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 106 106 5 106 6 1 11 69 102 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 107 107 6 107 5 1 11 69 102 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 28 ] 17 64 C G - - MP 108 107 6 112 6 2 14 68 101 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 109 107 6 112 6 1 9 66 99 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 110 107 6 112 6 1 8 66 99 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 111 107 6 112 6 0 5 63 96 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 112 112 5 112 6 1 10 67 100 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 113 113 6 113 5 1 10 67 100 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 29 ] 18 63 A U - - MP 114 113 6 118 6 2 12 66 99 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -3.561 -2.654 -3.595 3.158 -3.821 -4.865 0.465 -3.651 -3.498 1.328 -4.034 -0.171 0.046 -4.090 -1.478 -2.444 ML 115 113 6 118 6 1 8 65 97 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 116 113 6 118 6 1 7 64 97 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 117 113 6 118 6 0 5 62 95 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 118 118 5 118 6 1 9 65 98 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 119 119 6 119 5 1 9 65 98 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 30 ] 19 62 G C - - MP 120 119 6 124 4 2 10 64 97 -6.791 -6.998 -0.059 -5.412 -4.462 -2.962 -4.540 0.383 -4.839 -4.581 -0.272 -4.759 -4.139 3.563 -4.497 -0.652 -0.665 -4.283 -2.295 -3.421 ML 121 119 6 124 4 1 8 63 96 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 122 119 6 124 4 1 6 63 95 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 123 119 6 124 4 0 5 61 94 -4.568 -4.250 -2.265 -0.520 IL 124 124 5 124 4 1 9 64 97 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 125 125 6 125 3 1 9 64 97 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 31 ] 20 - C - - - ML 126 125 6 128 3 1 9 62 95 -7.819 -0.023 -6.474 -1.396 1.516 -2.205 -0.881 D 127 125 6 128 3 0 4 60 93 -6.174 -1.687 -0.566 IL 128 128 3 128 3 1 8 63 96 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 32 ] 21 - U - - - ML 129 128 3 131 3 1 8 61 94 -7.819 -0.023 -6.474 -1.223 -1.267 -1.942 1.534 D 130 128 3 131 3 0 4 59 92 -6.174 -1.687 -0.566 IL 131 131 3 131 3 1 7 62 95 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 33 ] 22 - G - - - ML 132 131 3 134 3 1 7 60 93 -7.819 -0.023 -6.474 -1.271 -2.440 1.641 -1.825 D 133 131 3 134 3 0 4 58 91 -6.174 -1.687 -0.566 IL 134 134 3 134 3 1 7 61 94 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 34 ] 23 - A - - - ML 135 134 3 137 3 1 6 59 92 -7.819 -0.023 -6.474 1.648 -2.082 -1.743 -1.597 D 136 134 3 137 3 0 3 57 90 -6.174 -1.687 -0.566 IL 137 137 3 137 3 1 6 60 93 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 35 ] 24 - U - - - ML 138 137 3 140 3 1 5 58 91 -7.819 -0.023 -6.474 -1.223 -1.267 -1.942 1.534 D 139 137 3 140 3 0 3 56 89 -6.174 -1.687 -0.566 IL 140 140 3 140 3 1 5 59 92 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 36 ] 25 - G - - - ML 141 140 3 143 3 1 5 57 90 -7.819 -0.023 -6.474 -1.271 -2.440 1.641 -1.825 D 142 140 3 143 3 0 2 55 88 -6.174 -1.687 -0.566 IL 143 143 3 143 3 1 5 58 91 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 37 ] 26 - A - - - ML 144 143 3 146 3 1 4 56 89 -8.220 -0.021 -6.537 1.648 -2.082 -1.743 -1.597 D 145 143 3 146 3 0 2 55 87 -5.620 -0.734 -1.403 IL 146 146 3 146 3 1 4 56 89 -1.925 -0.554 -4.164 0.000 0.000 0.000 0.000 [ MATR 38 ] - 61 - C - - MR 147 146 3 149 2 1 3 55 88 -8.181 -0.005 -1.396 1.516 -2.205 -0.881 D 148 146 3 149 2 0 2 54 87 -4.432 -0.068 IR 149 149 3 149 2 1 3 55 88 -1.823 -0.479 0.000 0.000 0.000 0.000 [ BIF 39 ] - - - - - - B 150 149 3 151 195 0 2 54 87 [ BEGL 40 ] - - - - - - S 151 150 1 152 4 0 0 28 47 -0.047 -6.756 -6.164 -6.804 [ MATP 41 ] 27 40 G C - - MP 152 151 1 156 6 2 2 28 47 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -4.462 -2.962 -4.540 0.383 -4.839 -4.581 -0.272 -4.759 -4.139 3.563 -4.497 -0.652 -0.665 -4.283 -2.295 -3.421 ML 153 151 1 156 6 1 1 27 45 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 154 151 1 156 6 1 1 26 45 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 155 151 1 156 6 0 0 24 43 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 156 156 5 156 6 1 1 28 47 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 157 157 6 157 5 1 1 27 46 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 42 ] 28 39 C G - - MP 158 157 6 162 6 2 2 26 45 -9.050 -8.989 -0.028 -6.843 -8.045 -8.440 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 159 157 6 162 6 1 1 25 44 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 160 157 6 162 6 1 1 25 44 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 161 157 6 162 6 0 0 23 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 162 162 5 162 6 1 1 26 45 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 163 163 6 163 5 1 1 25 44 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 43 ] 29 38 U A - - MP 164 163 6 168 6 2 2 24 43 -9.044 -8.983 -0.022 -7.760 -8.039 -8.434 -3.869 -3.681 -3.741 -0.001 -2.756 -4.334 1.564 -3.428 -3.750 0.307 -4.139 -1.590 3.149 -4.031 -0.440 -2.604 ML 165 163 6 168 6 1 1 23 42 -6.324 -6.670 -1.208 -1.079 -6.520 -4.049 0.267 -0.365 -0.305 0.276 MR 166 163 6 168 6 1 1 23 42 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 167 163 6 168 6 0 0 22 41 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 168 168 5 168 6 1 1 24 43 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 169 169 6 169 5 1 1 23 42 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 44 ] 30 37 C G - - MP 170 169 6 174 4 2 2 22 41 -6.791 -6.998 -0.059 -5.412 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 171 169 6 174 4 1 1 23 42 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 172 169 6 174 4 1 1 22 41 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 173 169 6 174 4 0 0 21 40 -4.568 -4.250 -2.265 -0.520 IL 174 174 5 174 4 1 1 24 43 -1.686 -2.369 -1.117 -4.855 0.000 0.000 0.000 0.000 IR 175 175 6 175 3 1 1 23 42 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 45 ] 31 - C - - - ML 176 175 6 178 3 1 1 19 38 -7.819 -0.023 -6.474 -1.396 1.516 -2.205 -0.881 D 177 175 6 178 3 0 0 18 37 -6.174 -1.687 -0.566 IL 178 178 3 178 3 1 1 22 41 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 46 ] 32 - A - - - ML 179 178 3 181 3 1 1 18 36 -7.819 -0.023 -6.474 1.648 -2.082 -1.743 -1.597 D 180 178 3 181 3 0 0 17 36 -6.174 -1.687 -0.566 IL 181 181 3 181 3 1 1 21 40 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 47 ] 33 - A - - - ML 182 181 3 184 3 1 1 16 35 -7.819 -0.023 -6.474 1.648 -2.082 -1.743 -1.597 D 183 181 3 184 3 0 0 16 34 -6.174 -1.687 -0.566 IL 184 184 3 184 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 48 ] 34 - a - - - ML 185 184 3 187 3 1 1 15 33 -7.819 -0.023 -6.474 0.962 -0.927 -0.359 -0.424 D 186 184 3 187 3 0 0 15 33 -6.174 -1.687 -0.566 IL 187 187 3 187 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 49 ] 35 - A - - - ML 188 187 3 190 3 1 1 13 32 -7.819 -0.023 -6.474 1.648 -2.082 -1.743 -1.597 D 189 187 3 190 3 0 0 13 32 -6.174 -1.687 -0.566 IL 190 190 3 190 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 50 ] 36 - A - - - ML 191 190 3 193 2 1 1 1 1 * 0.000 1.648 -2.082 -1.743 -1.597 D 192 190 3 193 2 0 0 0 0 * 0.000 IL 193 193 3 193 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 51 ] - - - - - - E 194 193 3 -1 0 0 0 0 0 [ BEGR 52 ] - - - - - - S 195 150 1 196 3 0 0 40 73 -7.819 -0.023 -6.474 IL 196 196 2 196 3 1 1 42 75 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 53 ] 41 - G - - - ML 197 196 2 199 3 1 1 40 73 -7.819 -0.023 -6.474 -1.271 -2.440 1.641 -1.825 D 198 196 2 199 3 0 0 38 71 -6.174 -1.687 -0.566 IL 199 199 3 199 3 1 1 41 74 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 54 ] 42 - A - - - ML 200 199 3 202 3 1 1 39 72 -7.819 -0.023 -6.474 1.648 -2.082 -1.743 -1.597 D 201 199 3 202 3 0 0 37 70 -6.174 -1.687 -0.566 IL 202 202 3 202 3 1 1 40 73 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 55 ] 43 - A - - - ML 203 202 3 205 5 1 1 38 71 -6.968 -0.043 -6.783 -6.995 -7.887 1.648 -2.082 -1.743 -1.597 D 204 202 3 205 5 0 0 36 69 -4.959 -0.803 -4.221 -2.596 -2.508 IL 205 205 3 205 5 1 1 38 71 -2.408 -0.496 -4.087 -5.920 -5.193 0.000 0.000 0.000 0.000 [ MATP 56 ] 44 60 A U - - MP 206 205 3 210 6 2 2 37 70 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -3.561 -2.654 -3.595 3.158 -3.821 -4.865 0.465 -3.651 -3.498 1.328 -4.034 -0.171 0.046 -4.090 -1.478 -2.444 ML 207 205 3 210 6 1 1 35 68 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 208 205 3 210 6 1 1 35 68 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 209 205 3 210 6 0 0 32 65 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 210 210 5 210 6 1 1 36 69 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 211 211 6 211 5 1 1 36 69 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 57 ] 45 59 C G - - MP 212 211 6 216 6 2 2 35 68 -9.050 -8.989 -0.022 -7.765 -8.045 -8.440 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 213 211 6 216 6 1 1 33 66 -6.250 -6.596 -1.310 -1.005 -6.446 -3.975 0.368 -0.385 -0.191 0.094 MR 214 211 6 216 6 1 1 33 66 -6.988 -5.717 -1.625 -5.695 -0.829 -3.908 0.368 -0.385 -0.191 0.094 D 215 211 6 216 6 0 0 30 63 -9.049 -7.747 -3.544 -4.226 -4.244 -0.319 IL 216 216 5 216 6 1 1 34 67 -2.579 -2.842 -0.760 -4.497 -5.274 -4.934 0.000 0.000 0.000 0.000 IR 217 217 6 217 5 1 1 34 67 -2.408 -0.496 -5.920 -4.087 -5.193 0.000 0.000 0.000 0.000 [ MATP 58 ] 46 58 C G - - MP 218 217 6 222 4 2 2 33 66 -3.294 -6.998 -0.206 -5.412 -4.261 -4.139 -3.998 -0.400 -2.783 -4.447 3.451 -3.563 -4.039 -0.114 -4.329 -2.083 0.758 -4.348 -0.484 -2.889 ML 219 217 6 222 4 1 1 31 64 -3.758 -3.940 -0.507 -2.670 0.368 -0.385 -0.191 0.094 MR 220 217 6 222 4 1 1 30 63 -4.809 -3.838 -1.706 -0.766 0.368 -0.385 -0.191 0.094 D 221 217 6 222 4 0 0 29 62 -4.568 -4.250 -2.265 -0.520 IL 222 222 5 222 4 1 1 35 68 -0.807 -3.667 -2.415 -2.623 0.000 0.000 0.000 0.000 IR 223 223 6 223 3 1 1 23 43 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 59 ] 51 - u - - - ML 224 223 6 226 3 1 1 18 38 -7.690 -0.025 -6.344 0.203 -0.679 -0.354 0.528 D 225 223 6 226 3 0 0 21 42 -1.234 -2.466 -1.344 IL 226 226 3 226 3 1 1 22 43 -1.311 -0.849 -4.585 0.000 0.000 0.000 0.000 [ MATL 60 ] 54 - a - - - ML 227 226 3 229 3 1 1 16 35 -7.819 -0.023 -6.474 0.772 -1.070 0.068 -0.383 D 228 226 3 229 3 0 0 16 34 -6.174 -1.687 -0.566 IL 229 229 3 229 3 1 1 20 38 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 61 ] 55 - u - - - ML 230 229 3 232 3 1 1 15 33 -7.819 -0.023 -6.474 0.149 -0.323 -0.997 0.669 D 231 229 3 232 3 0 0 15 33 -6.174 -1.687 -0.566 IL 232 232 3 232 3 1 1 19 37 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 62 ] 56 - u - - - ML 233 232 3 235 3 1 1 13 32 -7.819 -0.023 -6.474 -0.263 -0.478 -1.036 0.972 D 234 232 3 235 3 0 0 13 32 -6.174 -1.687 -0.566 IL 235 235 3 235 3 1 1 18 36 -1.442 -0.798 -4.142 0.000 0.000 0.000 0.000 [ MATL 63 ] 57 - A - - - ML 236 235 3 238 2 1 1 1 1 * 0.000 1.475 -1.688 -1.087 -1.185 D 237 235 3 238 2 0 0 0 0 * 0.000 IL 238 238 3 238 2 1 1 13 28 -1.823 -0.479 0.000 0.000 0.000 0.000 [ END 64 ] - - - - - - E 239 238 3 -1 0 0 0 0 0 // HMMER3/f [i1.1 | October 2013] NAME Hammerhead_HH9 ACC RF02275 LENG 77 MAXL 166 ALPH RNA RF no MM no CONS yes CS yes MAP yes DATE Fri Feb 28 01:30:53 2014 COM [1] /nfs/production/xfam/rfam/software/bin/cmbuild -F CM SEED COM [2] /nfs/production/xfam/rfam/software/bin/cmcalibrate --mpi CM NSEQ 33 EFFN 2.219604 CKSUM 796486396 STATS LOCAL MSV -8.8496 0.71890 STATS LOCAL VITERBI -9.3336 0.71890 STATS LOCAL FORWARD -4.0471 0.71890 HMM A C G U m->m m->i m->d i->m i->i d->m d->d COMPO 1.31725 1.38958 1.36177 1.48394 1.38629 1.38629 1.38629 1.38629 0.23584 3.90062 1.66143 1.46634 0.26236 0.00000 * 1 1.62034 1.46101 2.09577 0.80477 1 u - - : 1.38629 1.38629 1.38629 1.38629 0.04995 3.71472 3.71472 1.46634 0.26236 1.50249 0.25177 2 1.61228 1.42275 2.03579 0.84644 2 u - - : 1.38629 1.38629 1.38629 1.38629 0.04811 3.75142 3.75142 1.46634 0.26236 0.22692 1.59448 3 1.29816 2.02841 0.90551 1.65503 3 g - - : 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 4 1.27128 1.88516 0.94878 1.71196 4 g - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 5 2.39214 3.09549 0.20715 2.98743 5 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 6 3.13217 0.25594 2.90124 2.06174 6 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 7 2.87265 0.24622 2.80962 2.28795 7 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 8 1.68120 2.27610 0.51345 2.18268 8 G - - ( 1.38629 1.38629 1.38629 1.38629 0.07418 2.97076 3.90062 0.66121 0.72613 1.09861 0.40547 9 2.55429 2.52778 3.06936 0.22820 10 U - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 10 2.55429 2.52778 3.06936 0.22820 11 U - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 11 0.26628 2.83571 2.35745 2.52026 12 A - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 12 2.77408 0.21654 3.34930 2.33116 13 C - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 13 3.13218 0.25594 2.90125 2.06175 14 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 14 2.90343 1.85418 2.64627 0.33175 15 U - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 15 1.64887 2.63991 0.42081 2.52761 16 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 16 3.13571 0.25552 2.90290 2.06235 17 C - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 17 0.36748 2.70007 1.78040 2.63452 18 A - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 18 2.54639 3.17803 0.17945 3.11808 19 G - - ( 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 19 2.77408 0.21654 3.34930 2.33116 20 C - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 20 2.55429 2.52778 3.06936 0.22820 21 U - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 21 2.63875 3.50800 0.15924 3.08351 22 G - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 22 0.16531 3.17973 2.90967 2.87749 23 A - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 23 2.55429 2.52778 3.06936 0.22820 24 U - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 24 2.63875 3.50800 0.15924 3.08351 25 G - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 25 0.16531 3.17973 2.90967 2.87749 26 A - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 26 2.55311 3.18579 0.17787 3.12896 27 G - - < 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 27 3.14279 0.25469 2.90619 2.06356 28 C - - < 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 28 2.86110 1.83249 2.61025 0.34353 29 U - - < 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 29 3.12324 0.25699 2.89707 2.06021 30 C - - < 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 30 2.77408 0.21654 3.34930 2.33116 31 C - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 31 0.16531 3.17973 2.90967 2.87749 32 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 32 0.16531 3.17973 2.90967 2.87749 33 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 33 0.66660 2.09592 1.64667 1.76667 34 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 34 0.16531 3.17973 2.90967 2.87749 35 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 35 0.16531 3.17973 2.90967 2.87749 36 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 36 2.33798 3.06863 0.22125 2.89182 37 G - - > 1.38629 1.38629 1.38629 1.38629 0.05486 3.90062 3.40676 1.46634 0.26236 1.09861 0.40547 37 0.38820 2.79614 1.67049 2.62387 38 A - - > 1.38629 1.38629 1.38629 1.38629 0.04185 3.88761 3.88761 1.46634 0.26236 0.79775 0.59846 38 2.33616 3.06620 0.22181 2.88886 39 G - - > 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 39 3.30407 0.21379 3.00346 2.24303 40 C - - > 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 40 2.63875 3.50800 0.15924 3.08351 41 G - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 41 0.16531 3.17973 2.90967 2.87749 42 A - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 42 0.16531 3.17973 2.90967 2.87749 43 A - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 43 0.36687 2.70221 1.78074 2.63767 44 A - - < 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 44 3.14057 0.25495 2.90516 2.06318 45 C - - < 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 45 3.13879 0.25516 2.90433 2.06288 46 C - - < 1.38629 1.38629 1.38629 1.38629 0.15593 2.08625 3.90062 1.14404 0.38350 1.09861 0.40547 46 1.24976 1.91457 1.63202 0.99294 51 u - - _ 1.38629 1.38629 1.38629 1.38629 0.15593 2.08625 3.90062 0.80827 0.58992 1.09861 0.40547 47 0.81292 2.22612 1.30636 1.72772 54 a - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 48 1.28765 1.61885 2.15581 0.89125 55 u - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 49 1.64210 1.76568 2.19860 0.64551 56 U - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 50 0.28651 2.78811 2.27473 2.46793 57 A - - _ 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 51 2.33967 3.07087 0.22073 2.89456 58 G - - > 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 52 2.33966 3.07086 0.22073 2.89455 59 G - - > 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 53 2.86227 2.06758 2.51261 0.30746 60 U - - > 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 54 2.77408 0.21654 3.34930 2.33116 61 C - - , 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 55 3.32358 0.21190 3.01197 2.24680 62 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 56 2.86281 2.06764 2.51281 0.30739 63 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 57 2.34004 3.07136 0.22061 2.89516 64 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 58 2.76328 0.48300 2.45809 1.45077 65 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 59 0.37592 2.83207 1.69132 2.65672 66 A - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 60 2.34367 3.07620 0.21949 2.90108 67 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 61 2.55429 2.52778 3.06936 0.22820 68 U - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 62 0.16531 3.17973 2.90967 2.87749 69 A - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 63 2.14420 0.55656 2.71929 1.41166 70 C - - - 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 64 2.39469 1.59253 1.87945 0.59291 71 U - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 65 2.53045 2.97714 0.20945 2.84031 72 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 66 2.33999 3.07129 0.22063 2.89508 73 G - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 67 3.20820 0.25953 2.92763 2.00521 74 C - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 68 1.98104 1.14215 1.62238 1.06273 75 u - - ) 1.38629 1.38629 1.38629 1.38629 0.04130 3.90062 3.90062 1.46634 0.26236 1.09861 0.40547 69 1.61663 2.00825 1.87483 0.66586 76 U - - : 1.38629 1.38629 1.38629 1.38629 0.19731 3.90062 1.83991 1.46634 0.26236 1.09861 0.40547 70 0.81558 2.17566 1.32970 1.71742 77 a - - : 1.38629 1.38629 1.38629 1.38629 0.04811 3.75142 3.75142 1.46634 0.26236 2.28762 0.10704 71 0.81612 1.82472 1.79275 1.46927 78 a - - : 1.38629 1.38629 1.38629 1.38629 0.04811 3.75142 3.75142 1.46634 0.26236 2.28762 0.10704 72 1.34010 1.90825 1.16493 1.28051 79 g - - : 1.38629 1.38629 1.38629 1.38629 0.04811 3.75142 3.75142 1.46634 0.26236 2.28762 0.10704 73 0.90336 1.74956 1.59163 1.52624 80 a - - : 1.38629 1.38629 1.38629 1.38629 0.04811 3.75142 3.75142 1.46634 0.26236 2.28762 0.10704 74 1.18139 1.49660 1.80689 1.18714 81 a - - : 1.38629 1.38629 1.38629 1.38629 0.04811 3.75142 3.75142 1.46634 0.26236 2.28762 0.10704 75 1.10246 1.68127 1.41247 1.43435 82 a - - : 1.38629 1.38629 1.38629 1.38629 0.15306 3.75142 2.13335 1.46634 0.26236 2.28762 0.10704 76 1.27283 1.40257 1.54710 1.34272 83 a - - : 1.38629 1.38629 1.38629 1.38629 0.05329 3.65165 3.65165 1.46634 0.26236 2.63151 0.07469 77 1.34601 1.64433 2.07238 0.86584 84 u - - : 1.38629 1.38629 1.38629 1.38629 0.49277 0.94400 * 0.13173 2.09216 0.00000 * //