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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 287021573c592fdb70fdbbc88943aa16a8740fc0
author rnateam
date Fri, 13 Jan 2017 16:49:16 -0500
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mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0
Copyright Sebastian Will

Compute pair probs ...
Compute pairwise alignments ... 
Perform progressive alignment ...



vhuU               AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU-
fwdB               AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU-
selD               UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA
hdrA               GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU-
vhuD               GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC-
fruA               ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG---
fdhA               CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG-

alifold            ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58)