Mercurial > repos > rnateam > locarna_multiple
annotate test-data/haca.snoRNA-default.stdout @ 4:6e20ad2c8752 draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
author | bgruening |
---|---|
date | Mon, 19 Aug 2024 18:52:41 +0000 |
parents | 7554c0df9139 |
children |
rev | line source |
---|---|
4
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 2.0.1 |
0
8414fea2a6fd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
rnateam
parents:
diff
changeset
|
2 |
8414fea2a6fd
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 1d1d9aac8cb96d043be07f2e4059baa3b05c2afc
rnateam
parents:
diff
changeset
|
3 |
4
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
4 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUUCGGAA-AGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUC-CAUUCCCAGCUUGCUCCGUAGCUGGCG |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
5 ACA30 UGGCACUUUCACAG--UUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGUGCUGAGAGAAAAC---CC-UUG--AUUGUAUU-CUUGCCCUGGG---AUUAUACCAGUGG |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
6 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGCCCAGAA--GGCUGCCACAGAAACAC--UGUGAC-----UCAUG-GGCCCUGUUCCUGUGUCCCAGGCUCAG |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
7 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGCUGG--CCCAUGGGUGA-CCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
8 #A1 ................................................................AAAAAA.................................................. |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
9 #A2 ................................................................123456.................................................. |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
10 |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
11 ACA7 AUUGGA-----AGACACU-CUGCG-----ACA |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
12 ACA30 CAACUG-----UCACUCA-AUGGG-----ACA |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
13 ACA5 GGAUAA-----AUUUGGU-UACAG-----ACA |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
14 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
15 #A1 .............................BBB |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
16 #A2 .............................123 |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
17 |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
18 alifold .((((((..........((((..(((((........)))))..))))..........)))))).............((((((.............((((((((..........)))).)) |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
19 ))..............)).))))......... (-53.08 = -26.63 + -26.46) |
6e20ad2c8752
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 94c141a71ef115279f1090f782b6f5cdeea9c277
bgruening
parents:
3
diff
changeset
|
20 Results written to target directory /tmp/tmpstsz4a83/job_working_directory/000/4/working/mlocarna_results. |