Mercurial > repos > rnateam > locarna_multiple
comparison test-data/haca.snoRNA-c.aln @ 3:7554c0df9139 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 10ccc47885ce71e602d66e157bd475f1facbd042
| author | bgruening |
|---|---|
| date | Mon, 05 Dec 2022 14:28:49 +0000 |
| parents | a5a2d3cefce1 |
| children | 6e20ad2c8752 |
comparison
equal
deleted
inserted
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| 2:94b0468f0db8 | 3:7554c0df9139 |
|---|---|
| 1 CLUSTAL W --- LocARNA 1.9.0 | 1 CLUSTAL W --- LocARNA 1.9.2.3 |
| 2 | 2 |
| 3 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGG | 3 ACA7 ACCUCCUGGGAUCGCAUCUGG-AGAGUGC---CUAGUAUUCUGCCAGCUU-CGGAAAGGGAGGGAAAGCAAGCCUGGCAGAGGCACCCAUUC-CAUUCCCAGCUUGCUCCGUAGCUGGCG |
| 4 ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGU | 4 ACA30 UGGCACUUU--CACAGUUCCU-UCCCCAG---GCAGUGGGGCCAGGAUUUGGUAGCUGGUGCUGAGAGAAAAC---CC-UUG--AUUGUAUU-CUUGCCCUGGG---AUUAUACCAGUGG |
| 5 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGC | 5 ACA5 UGCAGCCGUGUCAAAUUCAGUACCUGUCCUAUGCAUGGUAGGCACUGGC--CCAGAAGGCUGCCACAGAAACAC--UGUGACUCAUGG------GCCCUGUUCCUGUGUCCCAGGCUCAG |
| 6 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGCUGG-CCCAUG--GGUGACCCU | 6 ACA59 GCCCAGGGUAUGUUCACGGGGCGAUGCUGCCCUCCCAGC-UGGCCCAUG--GGUGACCCUGGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA |
| 7 #A1 ............................................................ | 7 #A1 ................................................................AAAAAA.................................................. |
| 8 #A2 ............................................................ | 8 #A2 ................................................................123456.................................................. |
| 9 | 9 |
| 10 ACA7 AGGGAAAGCAAGCCUGGCAGAG-GCACCCAUUCCAUUCCCAGCUUGCUCCGUAGCUGGCG | 10 ACA7 AUUGGAA-----GACACUC-UGC-----GACA |
| 11 ACA30 GCUGAGAGAAAAC---CC-UUG---AUUGUAUUCUUGCCCUGGG---AUUAUACCAGUGG | 11 ACA30 CAACUGU-----CACUCAA-UGG-----GACA |
| 12 ACA5 UGCCACAGAAACAC--UGUGAC-UCAUGG-----GCCCUGUUCCUGUGUCCCAGGCUCAG | 12 ACA5 GGAUAAA-----UUUGGUU-ACA-----GACA |
| 13 ACA59 GGGAACAUUAACUGCCUCACAACGUUUGUGCCUCAGUUACCCGUAGAUGUAGUGAGGGUA | |
| 14 #A1 ....AAAAAA.................................................. | |
| 15 #A2 ....123456.................................................. | |
| 16 | |
| 17 ACA7 AUUGGA--AGA---CACU-CUGCG-----ACA | |
| 18 ACA30 CAACUG--UCA---CUCA-AUGGG-----ACA | |
| 19 ACA5 GGAUAA--AUU---UGGU-UACAG-----ACA | |
| 20 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA | 13 ACA59 ACAAUACUUACUCUCGUUGGUGAUAAGGAACA |
| 21 #A1 .............................BBB | 14 #A1 .............................BBB |
| 22 #A2 .............................123 | 15 #A2 .............................123 |