comparison test-data/archaea-default.stdout @ 0:c5f150d2686f draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/locarna commit 287021573c592fdb70fdbbc88943aa16a8740fc0
author rnateam
date Fri, 13 Jan 2017 16:48:31 -0500
parents
children 535f2e41d4f7
comparison
equal deleted inserted replaced
-1:000000000000 0:c5f150d2686f
1 mLocARNA --- multiple Local (and global) Alignment of RNA --- LocARNA 1.9.0
2 Copyright Sebastian Will
3
4 Compute pair probs ...
5 Compute pairwise alignments ...
6 Perform progressive alignment ...
7
8
9
10 vhuU AG-CUCACAACCGAACCC-AU------------UUGGGAGGUUGUGAGCU-
11 fwdB AU-GUUGGAGGGGAACCC-GU------------AAGGGACCCUCCAAGAU-
12 selD UUACGAUGUGCCGAACCCUUU------------AAGGGAGGCACAUCGAAA
13 hdrA GG--CACCACUCGAAGGC--U------------AAGCCAAAGUGGUG-CU-
14 vhuD GU--UCUCUCGGGAACCCGUC------------AAGGGACCGAGAGA-AC-
15 fruA ---CCUCGAGGGGAACCC-GA------------AAGGGACCCGAGAGG---
16 fdhA CG-CCACCCUGCGAACCCAAUAUAAAAUAAUACAAGGGAGCAG-GUGGCG-
17
18 alifold ((.(((((((((...(((.................))).))))))))))). (-31.59 = -20.01 + -11.58)