Mercurial > repos > rnateam > mafft
comparison test-data/mafft_custom_original.clustal.aln @ 15:bf28a8cff401 draft
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
author | bgruening |
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date | Wed, 20 Mar 2024 07:34:52 +0000 |
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children |
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14:6f28e90db932 | 15:bf28a8cff401 |
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1 CLUSTAL format alignment by MAFFT G-INS-i (v7.520) | |
2 | |
3 | |
4 1== MN---------------------------------------------------------- | |
5 2== MN---------------------------------------------------------- | |
6 3== MN---------------------------------------------------------- | |
7 4=p MN---------------------------------------------------------- | |
8 5=p MN---------------------------------------------------------- | |
9 6== MK---------------------------------------------------------- | |
10 7== MR---------------------------------------------------------- | |
11 8=opsin, ------------------------------------------------------------ | |
12 9== MA------QQWS-LQRLAGRHPQDS--------------------------YED------ | |
13 10== MA------QQWS-LQRLAGRHPQDS--------------------------YED------ | |
14 11== MT------EAWNVAVFAARRSRDD----------------------------DD------ | |
15 12== MA-------AWE-AAFAARRRHEE----------------------------ED------ | |
16 13== MS---------------------------------------------------------- | |
17 14== MESGNVS----------------------------------------------------- | |
18 15== MEYHNVS----------------------------------------------------- | |
19 16== ME---------------------------------------------------------- | |
20 17== MD---------------------------------------------------------- | |
21 18== MT---------------------------------------------------------- | |
22 19== MA---------------------------------------------------------- | |
23 20== MESF-------------------------------------------------------- | |
24 21== MESF-------------------------------------------------------- | |
25 22== MDSF-------------------------------------------------------- | |
26 23== MERSHLP---------------------------------------------------ET | |
27 24== MERSLLP---------------------------------------------------EP | |
28 25== MI---------------------------------------------------------- | |
29 26== M----------------------------------------------------------- | |
30 27== MV---------------------------------------------------------- | |
31 28== MG---------------------------------------------------------- | |
32 29== MMDVN-----------SSGRPDLYGHLRSFLLPEVGRGLPDLSPDG------------GA | |
33 30== M----------------------------------------------------------- | |
34 31=p M----------------------------------------------------------- | |
35 32== MDVLS------------------------------------------------------- | |
36 33=p MDVFS------------------------------------------------------- | |
37 34== MANFTFGDLALD-VARMGGLASTPSGLRS-----TGLTTPGLSPTGLVTSDFNDSYGLTG | |
38 35=p MANFTFGDLALD-VARMGGLASTPSGLRS-----TGLTTPGLSPTGLVTSDFNDSYGLTG | |
39 36== ME---------------------------------------------------------- | |
40 | |
41 | |
42 1== ----GTEG--DNFY------------VPFSNKTG----------------------LARS | |
43 2== ----GTEG--PNFY------------VPFSNITG----------------------VVRS | |
44 3== ----GTEG--INFY------------VPMSNKTG----------------------VVRS | |
45 4=p ----GTEG--KNFY------------VPMSNRTG----------------------LVRS | |
46 5=p ----GTEG--NNFY------------VPLSNRTG----------------------LVRS | |
47 6== ----QVPEFHEDFY------IPIP--LDINNLSA------------------------YS | |
48 7== ----KMSE--EEFY------------L-FKNISS----------------------V--G | |
49 8=opsin, ------------------------------------------------------------ | |
50 9== ----STQS--SIFT------------YTNSNSTR-------------------------G | |
51 10== ----STQS--SIFT------------YTNSNSTR-------------------------G | |
52 11== ----TTRG--SVFT------------YTNTNNTR-------------------------G | |
53 12== ----TTRD--SVFT------------YTNSNNTR-------------------------G | |
54 13== ----SNSS------------------QAPPNGTP-------------------------G | |
55 14== SSLFGNVS--TALR-------------PEARLSA---E------TRLLGWNVPPEELRHI | |
56 15== SVL-GNVS--SVLR-------------PDARLSA---E------SRLLGWNVPPDELRHI | |
57 16== -PLCNASE--PPLR-------------PEAR-SSGNGD------LQFLGWNVPPDQIQYI | |
58 17== -ALCNASE--PPLR-------------PEARMSSGSDE------LQFLGWNVPPDQIQYI | |
59 18== ----NATG--PQMAY-----------YGAASMDFGYPE------GVSIVDFVRPEIKPYV | |
60 19== ----NVTG--PQMAF-----------YGSGAATFGYPE------GMTVADFVPDRVKHMV | |
61 20== AVAAAQLG--PHFA----------------PLS-----------NGSVVDKVTPDMAHLI | |
62 21== AVAAAQLG--PHFA----------------PLS-----------NGSVVDKVTPDMAHLI | |
63 22== AAVATQLG--PQFA----------------APS-----------NGSVVDKVTPDMAHLI | |
64 23== PFDLAHSG--PRFQ----------------AQSSG---------NGSVLDNVLPDMAHLV | |
65 24== PLAMALLG--PRFE----------------AQTGG---------NRSVLDNVLPDMAPLV | |
66 25== ----AVSG--PSYE----------------AFSYGGQARFN---NQTVVDKVPPDMLHLI | |
67 26== -----ANQ--LSYS----------------SLGWPYQP------NASVVDTMPKEMLYMI | |
68 27== ----ESTT--------------------LVNQTWWY--------NPTVD----------I | |
69 28== ----RDLR---------------------DNETWWY--------NPSIV----------V | |
70 29== DPVAGSWA--PHLL------------S---EVTASPAPTWDAPPDNASG----------- | |
71 30== ----------PHLL------------SGFLEVTASPAPTWDAPPDNVSG----------- | |
72 31=p ----------PHLL------------SGFLEVTASPAPTWDAPPDNVSG----------- | |
73 32== --------------------------PGQGNNTTSPPAPFETGGNTTGI----------- | |
74 33=p --------------------------FGQGNNTTASQEPFGTGGNVTSI----------- | |
75 34== QFINGSHS--SRSRD-----------NASANDT-----------SATNM----------T | |
76 35=p QFINGSHS--SRSRD-----------NASANDT-----------SATNM----------T | |
77 36== ----GAEG--QEELDWEALYLRLPLQNCSWNSTGWEPN-----WNVTVV----------P | |
78 | |
79 | |
80 1== PYEYPQY------YLAEPWKYSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYIL | |
81 2== PFEQPQY------YLAEPWQFSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYIL | |
82 3== PFEYPQY------YLAEPWKYRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYIL | |
83 4=p PFEYPQY------YLAEPWQFKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFIL | |
84 5=p PFEYPQY------YLAEPWQFKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFIL | |
85 6== PFLVPQD------HLGNQGIFMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYIL | |
86 7== PWDGPQY------HIAPVWAFYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYIL | |
87 8=opsin, ------------------------------------------------------------ | |
88 9== PFEGPNY------HIAPRWVYHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWIL | |
89 10== PFEGPNY------HIAPRWVYHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWIL | |
90 11== PFEGPNY------HIAPRWVYNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWIL | |
91 12== PFEGPNY------HIAPRWVYNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWIL | |
92 13== PFDGPQWP-----YQAPQSTYVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYIL | |
93 14== PEHWLTY------PEPPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILV | |
94 15== PEHWLIY------PEPPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILV | |
95 16== PEHWLTQ------LEPPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFV | |
96 17== PEHWLTQ------LEPPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFV | |
97 18== HQHWYNY------PPVNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILV | |
98 19== LDHWYNY------PPVNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLI | |
99 20== SPYWNQF------PAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLV | |
100 21== SPYWNQF------PAMDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLV | |
101 22== SPYWDQF------PAMDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLV | |
102 23== NPYWSRF------APMDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLV | |
103 24== NPHWSRF------APMDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLV | |
104 25== DANWYQY------PPLNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFV | |
105 26== HEHWYAF------PPMNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLV | |
106 27== HPHWAKF------DPIPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFI | |
107 28== HPHWREF------DQVPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFI | |
108 29== ---------CGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLI | |
109 30== ---------CGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLI | |
110 31=p ---------CGEQINYGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLI | |
111 32== -------------SDVTVSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLI | |
112 33=p -------------SDVTFSYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLI | |
113 34== DDRYWSL------TVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLI | |
114 35=p DDRYWSL------TVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLI | |
115 36== NTTWWQASAPFD-TPAALVRAAAKAVVLGLLILATVVGNVFVIAAILLERHLRSAANNLI | |
116 | |
117 | |
118 1== LNLAMANLFMVLFG-FTVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLA | |
119 2== LNLAVADLFMVFGG-FTTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLA | |
120 3== VNLAVADLFMACFG-FTVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLA | |
121 4=p VNLAVAGTIMVCFG-FTVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLA | |
122 5=p VNLAVAGAIMVCFG-FTVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLA | |
123 6== VNLSIANLFVAIFG-SPLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVA | |
124 7== VNVSFGGFLLCIFS-VFPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLA | |
125 8=opsin, ------DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIIS | |
126 9== VNLAVADLAETVIA-STISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIIS | |
127 10== VNLAVADLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIIS | |
128 11== VNLAFVDLVETLVA-STISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIIS | |
129 12== VNLAVADLGETVIA-STISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIIS | |
130 13== VNLAVADLLVTLCG-SSVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILA | |
131 14== INLAFCDFMMM-VK-TPIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIA | |
132 15== INLAFCDFMMM-IK-TPIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIA | |
133 16== LNLAVFDLIMC-LK-APIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIG | |
134 17== LNLAVFDLIMC-LK-APIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIG | |
135 18== VNLALSDLIMLTTN-VPFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMIS | |
136 19== VNLALSDLIMLTTN-FPPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMIS | |
137 20== INLAISDFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMIS | |
138 21== INLAISDFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMIS | |
139 22== INLAISDFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMIS | |
140 23== LNLAFSDFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIA | |
141 24== LNLAFSDFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIA | |
142 25== INLAISNFLMMFCM-SPPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIA | |
143 26== VNLAFSDFCMMAFM-MPTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMIT | |
144 27== INLAMSDLSFSAINGFPLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMIS | |
145 28== INLAFSDFTFSLVNGFPLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMIS | |
146 29== VSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVIS | |
147 30== VSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVIS | |
148 31=p VSLALADLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVIS | |
149 32== GSLAVTDLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIA | |
150 33=p GSLAVTDLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIA | |
151 34== LSLAVADLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIA | |
152 35=p LSLAVADLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIA | |
153 36== LSLAVADLLVACLV-MPLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIA | |
154 . : : * : : | |
155 | |
156 1== IERYIVICKPMGNF-RFGNTHAIMGVAFTWIMALAC-AAPPLVG-WS-----RYIPEGMQ | |
157 2== IERYVVVCKPMSNF-RFGENHAIMGVAFTWVMALAC-AAPPLVG-WS-----RYIPEGMQ | |
158 3== IERYIVVCKPMGNF-RFSATHAMMGIAFTWVMAFSC-AAPPLFG-WS-----RYMPEGMQ | |
159 4=p IERYIVVCKPMGSF-KFSSSHAFAGIAFTWVMALAC-AAPPLFG-WS-----RYIPEGMQ | |
160 5=p IERYIVVCKPMGSF-KFSSTHASAGIAFTWVMAMAC-AAPPLVG-WS-----RYIPEGIQ | |
161 6== FERWLVICKPLGNF-TFKTPHAIAGCILPWISALAA-SLPPLFG-WS-----RYIPEGLQ | |
162 7== FERYIVICKPFGNF-RFSSKHALTVVLATWTIGIGV-SIPPFFG-WS-----RFIPEGLQ | |
163 8=opsin, WERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVW-TAPPIFG-WS-----RYWPHGLK | |
164 9== WERWMVVCKPFGNV-RFDAKLAIVGIAFSWIWAAVW-TAPPIFG-WS-----RYWPHGLK | |
165 10== WERWLVVCKPFGNV-RFDAKLAIVGIAFSWIWSAVW-TAPPIFG-WS-----RYWPHGLK | |
166 11== WERWFVVCKPFGNI-KFDSKLAIIGIVFSWVWAWGW-SAPPIFG-WS-----RYWPHGLK | |
167 12== WERWFVVCKPFGNI-KFDGKLAVAGILFSWLWSCAW-TAPPIFG-WS-----RYWPHGLK | |
168 13== LERYVVVCKPLGDF-QFQRRHAVSGCAFTWGWALLW-SAPPLLG-WS-----SYVPEGLR | |
169 14== YDRFNVITRPMEG--KMTHGKAIAMIIFIYMYATPW-VVACYTETWG-----RFVPEGYL | |
170 15== YDRYNVITRPMEG--KMTHGKAIAMIIFIYLYATPW-VVACYTESWG-----RFVPEGYL | |
171 16== YDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFWD-----RFVPEGYL | |
172 17== YDRYNVITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFWD-----RFVPEGYL | |
173 18== FDRYNIICNGFNGP-KLTTGKAVVFALISWVIAIGC-ALPPFFG-WG-----NYILEGIL | |
174 19== FDRYNIICNGFNGP-KLTQGKATFMCGLAWVISVGW-SLPPFFG-WG-----SYTLEGIL | |
175 20== LDRYQVIVKGMAGR-PMTIPLALGKM---------------------------YVPEGNL | |
176 21== LDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSSIW-CLAPAFG-WS-----RYVPEGNL | |
177 22== LDRYQVIVKGMAGR-PMTIPLALGKIAYIWFMSTIWCCLAPVFG-WS-----RYVPEGNL | |
178 23== FDRYNVIVKGINGT-PMTIKTSIMKILFIWMMAVFW-TVMPLIG-WS-----AYVPEGNL | |
179 24== FDRYNVIVKGINGT-PMTIKTSIMKIAFIWMMAVFW-TIMPLIG-WS-----SYVPEGNL | |
180 25== FDRYNVIVKGLSGK-PLSINGALIRIIAIWLFSLGW-TIAPMFG-WN-----RYVPEGNM | |
181 26== LDRYNVIVRGMAAA-PLTHKKATLLLLFVWIWSGGW-TILPFFG-WS-----RYVPEGNL | |
182 27== IDRYNVIGRPMAASKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-WG-----AYVPEGIL | |
183 28== IDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-WG-----AYTLEGVL | |
184 29== IDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKV | |
185 30== IDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKV | |
186 31=p IDRYLGITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-WA-----QNVNDDKV | |
187 32== LDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTP---EDRSDPDA | |
188 33=p LDRYWAITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTP---EDRSDPDA | |
189 34== MDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGT | |
190 35=p MDRYWAVTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGT | |
191 36== LDRYWAVTN-IDYIHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLR | |
192 :*: : : . | |
193 | |
194 1== CSCGPDYYTLNPNFNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTVKEAAAAQQESA--- | |
195 2== CSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTVKEAAAQQQESA--- | |
196 3== CSCGPDYYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKVREAAAQQQESA--- | |
197 4=p CSCGPDYYTLNPDYNNESYVIYMFVCHFILPVAVIFFTYGRLVCTVKAAAAQQQDSA--- | |
198 5=p CSCGPDYYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTVKAAAAQQQDSA--- | |
199 6== CSCGPDWYTTNNKYNNESYVMFLFCFCFAVPFGTIVFCYGQLLITLKLAAKAQADSA--- | |
200 7== CSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRALKAVAAQQQESA--- | |
201 8=opsin, TSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE--- | |
202 9== TSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAIRAVAKQQKESE--- | |
203 10== TSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAIRAVAKQQKESE--- | |
204 11== TSCGPDVFSGSVELGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAIRAVAAQQKESE--- | |
205 12== TSCGPDVFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAIRAVAAQQKESE--- | |
206 13== TSCGPNWYTGGS--NNNSYILSLFVTCFVLPLSLILFSYTNLLLTLRAAAAQQKEAD--- | |
207 14== TSCTFDYLTDN--FDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKM | |
208 15== TSCTFDYLTDN--FDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKKM | |
209 16== TSCSFDYLSDN--FDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKKM | |
210 17== TSCSFDYLSDN--FDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKKM | |
211 18== DSCSYDYLTQD--FNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKKM | |
212 19== DSCSYDYFTRD--MNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKKM | |
213 20== TSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKM | |
214 21== TSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKM | |
215 22== TSCGIDYLERD--WNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKKM | |
216 23== TACSIDYMTRM--WNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKKM | |
217 24== TACSIDYMTRQ--WNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKKM | |
218 25== TACGTDYFNRG--LLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKKM | |
219 26== TSCTVDYLTKD--WSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKKM | |
220 27== TSCSFDYLSTD--PSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKRL | |
221 28== CNCSFDYISRD--STTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRL | |
222 29== CLISQDF----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG--- | |
223 30== CLISQDF----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG--- | |
224 31=p CLISQDF----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKFPG--- | |
225 32== CTISKDH----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVKKVEKT | |
226 33=p CTISKDH----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRKTVRKVEKK | |
227 34== CIISQDK----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKA | |
228 35=p CIISQDK----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKA | |
229 36== CVVSQDV----------GYQIFATASSFYVPVLIILILYWRIYQTARKRIRRRRGATARG | |
230 : * : * : | |
231 | |
232 1== ------------------------------------------------------------ | |
233 2== ------------------------------------------------------------ | |
234 3== ------------------------------------------------------------ | |
235 4=p ------------------------------------------------------------ | |
236 5=p ------------------------------------------------------------ | |
237 6== ------------------------------------------------------------ | |
238 7== ------------------------------------------------------------ | |
239 8=opsin, ------------------------------------------------------------ | |
240 9== ------------------------------------------------------------ | |
241 10== ------------------------------------------------------------ | |
242 11== ------------------------------------------------------------ | |
243 12== ------------------------------------------------------------ | |
244 13== ------------------------------------------------------------ | |
245 14== NVE------------------SLRS----------------------------------- | |
246 15== NVD------------------SLRS----------------------------------- | |
247 16== NVE------------------SLRS----------------------------------- | |
248 17== NVE------------------SLRS----------------------------------- | |
249 18== NVS------------------TLRS----------------------------------- | |
250 19== NVT------------------NLRS----------------------------------- | |
251 20== NVK------------------SLRS----------------------------------- | |
252 21== NVK------------------SLRS----------------------------------- | |
253 22== NVK------------------SLRS----------------------------------- | |
254 23== NVK------------------SLRS----------------------------------- | |
255 24== NVK------------------SLRS----------------------------------- | |
256 25== NVA------------------SLRS----------------------------------- | |
257 26== NVA------------------SLRA----------------------------------- | |
258 27== NAK------------------ELRK----------------------------------- | |
259 28== NAK------------------ELRK----------------------------------- | |
260 29== -----------FPRVEPDSVIALNG----------------------------------- | |
261 30== -----------FPRVQPESVISLNG----------------------------------- | |
262 31=p -----------FPRVQPESVISLNG----------------------------------- | |
263 32== GADTRHGASPAPQPKK-----SVNGE--SGSRNWRLGVESKAGGALC------------- | |
264 33=p GAGTSLGTSSAPPPKK-----SLNGQ--PGSGDWRRCAENRAVGTPC------------- | |
265 34== RLKTEETTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKK | |
266 35=p RLKTEETTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKK | |
267 36== GVG---------------------------------------------PPP--------- | |
268 | |
269 | |
270 1== ------------------------------------------------------------ | |
271 2== ------------------------------------------------------------ | |
272 3== ------------------------------------------------------------ | |
273 4=p ------------------------------------------------------------ | |
274 5=p ------------------------------------------------------------ | |
275 6== ------------------------------------------------------------ | |
276 7== ------------------------------------------------------------ | |
277 8=opsin, ------------------------------------------------------------ | |
278 9== ------------------------------------------------------------ | |
279 10== ------------------------------------------------------------ | |
280 11== ------------------------------------------------------------ | |
281 12== ------------------------------------------------------------ | |
282 13== ------------------------------------------------------------ | |
283 14== ------------------------------------------------------------ | |
284 15== ------------------------------------------------------------ | |
285 16== ------------------------------------------------------------ | |
286 17== ------------------------------------------------------------ | |
287 18== ------------------------------------------------------------ | |
288 19== ------------------------------------------------------------ | |
289 20== ------------------------------------------------------------ | |
290 21== ------------------------------------------------------------ | |
291 22== ------------------------------------------------------------ | |
292 23== ------------------------------------------------------------ | |
293 24== ------------------------------------------------------------ | |
294 25== ------------------------------------------------------------ | |
295 26== ------------------------------------------------------------ | |
296 27== ------------------------------------------------------------ | |
297 28== ------------------------------------------------------------ | |
298 29== ---------------------------IVKLQKE-------------------VEECAN- | |
299 30== ---------------------------VVKLQKE-------------------VEECAN- | |
300 31=p ---------------------------VVKLQKE-------------------VEECAN- | |
301 32== -----------------------------------ANGAVRQGDDGAALEVIEVHRVGNS | |
302 33=p -----------------------------------TNGAVRQGDDEATLEVIEVHRVGNS | |
303 34== LPENANGVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAML-ERQCNNG | |
304 35=p LPENANGVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAML-ERQCNNG | |
305 36== VPAGGALVAGGGSGGIAAAVVAVIGRPLPTISETTTTGFTNVSSNNTSPE---KQSCANG | |
306 | |
307 | |
308 1== -----------------------------------STQKAEKEVTRMVVLMVIGFLVCWV | |
309 2== -----------------------------------TTQKAEKEVTRMVIIMVIFFLICWL | |
310 3== -----------------------------------TTQKAEKEVTRMVILMVLGFMLAWT | |
311 4=p -----------------------------------STQKAEREVTKMVILMVFGFLIAWT | |
312 5=p -----------------------------------STQKAEREVTKMVILMVLGFLVAWT | |
313 6== -----------------------------------STQKAEREVTKMVVVMVLGFLVCWA | |
314 7== -----------------------------------TTQKAEREVSRMVVVMVGSFCVCYV | |
315 8=opsin, -----------------------------------STQKAEKEVTRMVVVMVLAFC---- | |
316 9== -----------------------------------STQKAEKEVTRMVVVMVLAFCFCWG | |
317 10== -----------------------------------STQKAEKEVTRMVVVMIFAYCVCWG | |
318 11== -----------------------------------STQKAEREVSRMVVVMIVAFCICWG | |
319 12== -----------------------------------STQKAEKEVSRMVVVMIVAYCFCWG | |
320 13== -----------------------------------TTQRAEREVTRMVIVMVMAFLLCWL | |
321 14== -------------------------------NVDKNKETAEIRIAKAAITICFLFFCSWT | |
322 15== -------------------------------NVDKSKEAAEIRIAKAAITICFLFFASWT | |
323 16== -------------------------------NVDKSKETAEIRIAKAAITICFLFFVSWT | |
324 17== -------------------------------NVDKSKETAEIRIAKAAITICFLFFVSWT | |
325 18== --------------------------------NEADAQRAEIRIAKTALVNVSLWFICWT | |
326 19== --------------------------------NEAETQRAEIRIAKTALVNVSLWFICWT | |
327 20== --------------------------------SEDAEKSAEGKLAKVALVTITLWFMAWT | |
328 21== --------------------------------SEDAEKSAEGKLAKVALVTITLWFMAWT | |
329 22== --------------------------------SEDADKSAEGKLAKVALVTISLWFMAWT | |
330 23== --------------------------------SEDCDKSAEGKLAKVALTTISLWFMAWT | |
331 24== --------------------------------SEDCDKSAENKLAKVALTTISLWFMAWT | |
332 25== --------------------------------SENQNTSAECKLAKVALMTISLWFMAWT | |
333 26== -------------------------------NADQQKQSAECRLAKVAMMTVGLWFMAWT | |
334 27== ---------------------------------AQAGASAEMKLAKISMVIITQFMLSWS | |
335 28== ---------------------------------AQAGANAEMRLAKISIVIVSQFLLSWS | |
336 29== -----------------LSRLLKH------ERKNISIFKREQKAATTLGIIVGAFTVCWL | |
337 30== -----------------LSRLLKH------ERKNISIFKREQKAATTLGIIVGAFTVCWL | |
338 31=p -----------------LSRLLKH------ERKNISIFKREQKAATTLGIIVGAFTVCWL | |
339 32== KEHLPLPSEAG--PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWL | |
340 33=p KEHLPLPSESG--SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWL | |
341 34== KK-------------------ISSNDTPYSRTREKLELKRERKAARTLAIITGAFLICWL | |
342 35=p KK-------------------ISSNDTPYSRTREKLELKRERKAARTLAIITGAFLICWL | |
343 36== LEADPPTTGYGAVAAAYYPSLVRR------KPKEAADSKRERKAAKTLAIITGAFVACWL | |
344 * . : | |
345 | |
346 1== PYASVAFYIFT---HQGSD-FGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLC | |
347 2== PYASVAMYIFT---HQGSN-FGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLC | |
348 3== PYAVVAFWIFT---NKGAD-FTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTIC | |
349 4=p PYATVAAWIFF---NKGAD-FSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIF | |
350 5=p PYATVAAWIFF---NKGAA-FSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLF | |
351 6== PYASFSLWIVS---HRGEE-FDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMMKMVC | |
352 7== PYAAFAMYMVN---NRNHG-LDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIMKMVC | |
353 8=opsin, ------------------------------------------------------------ | |
354 9== PYAFFACFAAA---NPGYP-FHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCILQLF- | |
355 10== PYTFFACFAAA---NPGYA-FHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCILQLF- | |
356 11== PYASFVSFAAA---NPGYA-FHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIMQLF- | |
357 12== PYTFFACFAAA---NPGYA-FHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCILQLF- | |
358 13== PYSTFALVVAT---HKGII-IQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLLEMLC | |
359 14== PYGVMSLIGAF---GDKTL-LTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCP | |
360 15== PYGVMSLIGAF---GDKTL-LTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCP | |
361 16== PYGVMSLIGAF---GDKSL-LTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCP | |
362 17== PYGVMSLIGAF---GDKSL-LTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCP | |
363 18== PYALISLKGVM---GDTSG-ITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLP | |
364 19== PYAAITIQGLL---GNAEG-ITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLP | |
365 20== PYLVINCMGLF---KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCP | |
366 21== PYLVINCMGLF---KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCP | |
367 22== PYLVINCMGLF---KF-EG-LTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCP | |
368 23== PYLVICYFGLF---KI-DG-LTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCP | |
369 24== PYLIICYFGLF---KI-DG-LTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCP | |
370 25== PYLVINFSGIF---NL-VK-ISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFP | |
371 26== PYLIISWAGVF---SSGTR-LTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFP | |
372 27== PYAIIALLAQF---GPAEW-VTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFP | |
373 28== PYAVVALLAQF---GPLEW-VTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFP | |
374 29== PFFLLSTARPFICGTSCSC-IPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQ | |
375 30== PFFLLSTARPFICGTSCSC-IPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQ | |
376 31=p PFFLLSTARPFICGTSCSC-IPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQ | |
377 32== PFFIVALVLPF---CESSCHMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIK | |
378 33=p PFFIVALVLPF---CESSCHMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIK | |
379 34== PFFIIALIGPF---VDPEG-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILF | |
380 35=p PFFIIALIGPF---VDPEG-IPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILF | |
381 36== PFFVLAILVPT---CDCE--VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLC | |
382 | |
383 | |
384 1== C-GKNPLGDDE-SGA-STSKTEVSSVS-TSPV---------------------------- | |
385 2== C-GKNPLGDDE-ASA-TASKTE------TSQV---------------------------- | |
386 3== C-GKNPFGDEDVSSTVSQSKTEVSSVS-SSQV---------------------------- | |
387 4=p C-GKNPLGDDE-SSTVSTSKTEVSS------V---------------------------- | |
388 5=p C-GKNPLGDEE-SSTVSTSKTEVSS------V---------------------------- | |
389 6== --GKN-IEEDE-AST-SSQVTQVSSVA-PEK----------------------------- | |
390 7== --GKA-MTDES-DTC-SSQKTEVSTVS-STQV---------------------------- | |
391 8=opsin, ------------------------------------------------------------ | |
392 9== --GKK-VDDGS-ELS-SASKTEVSSV---SSV---------------------------- | |
393 10== --GKK-VDDGS-ELS-SASKTEVSSV---SSV---------------------------- | |
394 11== --GKK-VDDGS-EAS-TTSRTEVSSVS-NSSV---------------------------- | |
395 12== --GKK-VDDGS-EVS--TSRTEVSSVS-NSSV---------------------------- | |
396 13== C-GYQPQRTGKASPGTPGPHADVTAAGLRNKV---------------------------- | |
397 14== WLALNEKAPES-SAV-ASTST---TQE-PQQT---------------------------- | |
398 15== WLAISEKAPES-RAA-ISTST---TQE-QQQT---------------------------- | |
399 16== WLGVNEKSGEI-SSA-QSTTT---QEQ--QQT---------------------------- | |
400 17== WLGVNEKSGEA-SSA-QSTTT---QEQ-TQQT---------------------------- | |
401 18== WFCVHETETKS-NDD-SQSNS---TVA-Q------------------------------- | |
402 19== WFCVHEKDPND-VEE-NQSSN---TQT-Q------------------------------- | |
403 20== CCVFGKVDDGK-SSD-AQSQA-TASEA-E------------------------------- | |
404 21== CCVFGKVDDGK-SSD-AQSQA-TASEA-E------------------------------- | |
405 22== CCVFGKVDDGK-SSE-AQSQA-TTSEA-E------------------------------- | |
406 23== MCVFGNTDEPK-PDA-PASDTETTSEA-D------------------------------- | |
407 24== MCVCGTTDEPK-PDA-PPSDTETTSEA-E------------------------------- | |
408 25== SLACA-AEPSS-DAV-STTSG-TTTVT-DNEK---------------------------- | |
409 26== SLACGSGESGS-DVK-SEASA-TTTME-EKPK---------------------------- | |
410 27== WLLTCCQFDEK-ECE-DANDAEEEVVA-SER---GGESRDAAQMKEMMAMMQKMQAQQAA | |
411 28== WVLTCCQFDDK-ETE-DDKDAETEIPA-GESSD-AAPSADAAQMKEMMAMMQKMQQQQAA | |
412 29== --CQYRNINRKLSAA-GMHEALKLAER-PERPEFVLQNADYCRKKG-------------- | |
413 30== --CQYRNINRKLSAA-GMHEALKLAER-PERSEFVLQNSDHCGKKG-------------- | |
414 31=p --CQYRNINRKLSAA-GMHEALKLAER-PERSEFVLQNSDHCGKKG-------------- | |
415 32== --CKFCR----------------------------------------------------- | |
416 33=p --CKFCR----------------------------------------------------- | |
417 34== --GKYRR----------------------------------------------------- | |
418 35=p --GKYRR----------------------------------------------------- | |
419 36== --GRRVR-RRR------------------------------------------------- | |
420 | |
421 | |
422 1== ------------------------------------------------------------ | |
423 2== ------------------------------------------------------------ | |
424 3== ------------------------------------------------------------ | |
425 4=p ------------------------------------------------------------ | |
426 5=p ------------------------------------------------------------ | |
427 6== ------------------------------------------------------------ | |
428 7== ------------------------------------------------------------ | |
429 8=opsin, ------------------------------------------------------------ | |
430 9== ------------------------------------------------------------ | |
431 10== ------------------------------------------------------------ | |
432 11== ------------------------------------------------------------ | |
433 12== ------------------------------------------------------------ | |
434 13== ---------------------------------------MP------------------- | |
435 14== ------------------------------------------------------------ | |
436 15== ------------------------------------------------------------ | |
437 16== ------------------------------------------------------------ | |
438 17== ------------------------------------------------------------ | |
439 18== ------------------------------------------------------------ | |
440 19== ------------------------------------------------------------ | |
441 20== ------------------------------------------------------------ | |
442 21== ------------------------------------------------------------ | |
443 22== ------------------------------------------------------------ | |
444 23== ------------------------------------------------------------ | |
445 24== ------------------------------------------------------------ | |
446 25== ------------------------------------------------------------ | |
447 26== ------------------------------------------------------------ | |
448 27== YQP---PPPPQGYPPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGA | |
449 28== YPPQGYAPPPQGYPPQGYPPQGY--PPQGYPPQGYPP---PPQGAPPQGAPP------AA | |
450 29== ------------------------------------------------------------ | |
451 30== ------------------------------------------------------------ | |
452 31=p ------------------------------------------------------------ | |
453 32== ------------------------------------------------------------ | |
454 33=p ------------------------------------------------------------ | |
455 34== ------------------------------------------------------------ | |
456 35=p ------------------------------------------------------------ | |
457 36== ------------------------------------------------------------ | |
458 | |
459 | |
460 1== ---------SPA | |
461 2== ---------APA | |
462 3== ---------SPA | |
463 4=p ---------SPA | |
464 5=p ---------SPA | |
465 6== ------------ | |
466 7== ---------GPN | |
467 8=opsin, ------------ | |
468 9== ---------SPA | |
469 10== ---------SPA | |
470 11== ---------APA | |
471 12== ---------SPA | |
472 13== --------AHPV | |
473 14== ---------TAA | |
474 15== ---------TAA | |
475 16== ---------TAA | |
476 17== ---------SAA | |
477 18== ---------DKA | |
478 19== ---------EKS | |
479 20== ---------SKA | |
480 21== ---------SKA | |
481 22== ---------SKA | |
482 23== ---------SKA | |
483 24== ---------SKD | |
484 25== ---------SNA | |
485 26== --------IPEA | |
486 27== PPQGVDNQAYQA | |
487 28== PPQGVDNQAYQA | |
488 29== ---------HDS | |
489 30== ---------HDT | |
490 31=p ---------HDT | |
491 32== -----------Q | |
492 33=p -----------R | |
493 34== ---------GHR | |
494 35=p ---------GHR | |
495 36== ---------APQ | |
496 |