Mercurial > repos > rnateam > mafft
diff test-data/mafft_nwns_result.aln @ 7:aaefa93c2dd2 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit eff9db2cd18c82a7de37851571b8989b48014c71"
| author | rnateam |
|---|---|
| date | Wed, 15 Apr 2020 15:33:37 -0400 |
| parents | 15974dd17515 |
| children |
line wrap: on
line diff
--- a/test-data/mafft_nwns_result.aln Sat Nov 11 15:06:34 2017 -0500 +++ b/test-data/mafft_nwns_result.aln Wed Apr 15 15:33:37 2020 -0400 @@ -1,270 +1,270 @@ -CLUSTAL format alignment by MAFFT NW-NS-2 (v7.221) +CLUSTAL format alignment by MAFFT NW-NS-2 (v7.455) -1== --------------------------------MNGTE--------------GDNF----- -2== --------------------------------MNGTE--------------GPNF----- -3== --------------------------------MNGTE--------------GINF----- -4=p --------------------------------MNGTE--------------GKNF----- -5=p --------------------------------MNGTE--------------GNNF----- -6== --------------------------------MKQVPEF------------HEDF----- -7== --------------------------------MRKMS--------------EEEF----- +1== ----------------------------------------MNG----------------T +2== ----------------------------------------MNG----------------T +3== ----------------------------------------MNG----------------T +4=p ----------------------------------------MNG----------------T +5=p ----------------------------------------MNG----------------T +6== ----------------------------------------MKQ----------------V +7== ----------------------------------------MRK----------------M 8=opsin, ------------------------------------------------------------ -9== --------------------------------MAQQWSLQRLAGRHPQDSYEDST----- -10== --------------------------------MAQQWSLQRLAGRHPQDSYEDST----- -11== --------------------------------MTEAWNVAVFAARRSRDD-DDTT----- -12== --------------------------------MAA-WEAAFAARRRHEE--EDTT----- -13== --------------------------------MS-----------------SNSS----- -14== ----------MES--GNV-----------SSSLFGNVSTAL----------RPEA----- -15== ----------MEY--HNV-----------SSVL-GNVSSVL----------RPDA----- -16== ----------ME-------------------PLCNASEPPL----------RPEA----- -17== ----------MD-------------------ALCNASEPPL----------RPEA----- -18== --------------------------------MTNATGPQM----------AYYG----- -19== --------------------------------MANVTGPQM----------AFYG----- -20== ---------------MES-----------FAVAAAQLGPHF----------APLS----- -21== ---------------MES-----------FAVAAAQLGPHF----------APLS----- -22== ---------------MDS-----------FAAVATQLGPQF----------AAPS----- -23== ----------MERSHLPE-----------TPFDLAHSGPRF----------QAQS----- -24== ----------MERSLLPE-----------PPLAMALLGPRF----------EAQT----- -25== --------------------------------MIAVSGPSY----------EAFS----- -26== ----------------------------------MANQLSY----------SSLG----- -27== ---------------------------------------MV----------ESTT----- -28== ----------------------------------------M----------GRDL----- -29== ---------MMDVNSSGRPDLYGHLRSF-LLPEVGRGLPDL----------SPDGGADPV +9== ----------------------------------------MAQQWSLQRLAGRHPQDSYE +10== ----------------------------------------MAQQWSLQRLAGRHPQDSYE +11== ----------------------------------------MTEAWNVAVFAARRSRDD-D +12== ----------------------------------------MAA-WEAAFAARRRHEE--E +13== ----------------------------------------MS-----------------S +14== ----------MESGNVSS------------SLFGNVST-ALRP----------------E +15== ----------MEYHNVSS------------VL-GNVSS-VLRP----------------D +16== ----------ME------------------PL-CNASEPPLRP----------------E +17== ----------MD------------------AL-CNASEPPLRP----------------E +18== --------------------------------MTNATGPQMAY----------------Y +19== --------------------------------MANVTGPQMAF----------------Y +20== ----------ME----SF------------AVAAAQLGPHFAP----------------L +21== ----------ME----SF------------AVAAAQLGPHFAP----------------L +22== ----------MD----SF------------AAVATQLGPQFAA----------------P +23== -----MERSHLP----ET------------PFDLAHSGPRFQA----------------Q +24== -----MERSLLP----EP------------PLAMALLGPRFEA----------------Q +25== --------------------------------MIAVSGPSYEA----------------F +26== ----------------------------------MANQLSYSS----------------L +27== ---------------------------------------MVES----------------T +28== ----------------------------------------MGR----------------D +29== ---------MMDVNSSGRPDLYGHLRSFL-LPEVGRGLPDLSPDGGA------------D 30== ------------------------------------------------------------ 31=p ------------------------------------------------------------ -32== ----------MDVLSPG------------QGNNTTSPPAPF----------ETGG----- -33=p ----------MDVFSFG------------QGNNTTASQEPF----------GTGG----- -34== MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGL----------SPTG----- -35=p MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGL----------SPTG----- -36== -MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGW----------EPNW----- +32== ----------MDVLSP-------------------------------------------- +33=p ----------MDVFSF-------------------------------------------- +34== MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T +35=p MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T +36== -MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGWEPNWNV------------T -1== -------------YVP-----F-SNKTG----------LARSPYEYPQY-YLAEPWK--- -2== -------------YVP-----F-SNITG----------VVRSPFEQPQY-YLAEPWQ--- -3== -------------YVP-----M-SNKTG----------VVRSPFEYPQY-YLAEPWK--- -4=p -------------YVP-----M-SNRTG----------LVRSPFEYPQY-YLAEPWQ--- -5=p -------------YVP-----L-SNRTG----------LVRSPFEYPQY-YLAEPWQ--- -6== -------------YIPIP-LDI-NNLS------------AYSPFLVPQD-HLGNQGI--- -7== -------------YL------F-KNIS------------SVGPWDGPQY-HIAPVWA--- +1== E--G--DNFYVP----FSNKTGLARSPYEYPQY-------YLAEPWK---------YSAL +2== E--G--PNFYVP----FSNITGVVRSPFEQPQY-------YLAEPWQ---------FSML +3== E--G--INFYVP----MSNKTGVVRSPFEYPQY-------YLAEPWK---------YRLV +4=p E--G--KNFYVP----MSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKIL +5=p E--G--NNFYVP----LSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKLL +6== PEFH--EDFYIPIPLDINNLS--AYSPFLVPQD-------HLGNQGI---------FMAM +7== S--E--EEFYL-----FKNIS--SVGPWDGPQY-------HIAPVWA---------FYLQ 8=opsin, ------------------------------------------------------------ -9== -------------QSSI--FTY-TNSNS-----------TRGPFEGPNY-HIAPRWV--- -10== -------------QSSI--FTY-TNSNS-----------TRGPFEGPNY-HIAPRWV--- -11== -------------RGSV--FTY-TNTNN-----------TRGPFEGPNY-HIAPRWV--- -12== -------------RDSV--FTY-TNSNN-----------TRGPFEGPNY-HIAPRWV--- -13== -------------QAP---------PNG-----------TPGPFDGPQWPYQAPQST--- -14== -------------RLSA------ETRLL----------GWNVPPEELR--HIPEHWLTYP -15== -------------RLSA------ESRLL----------GWNVPPDELR--HIPEHWLIYP -16== -------------R-SSG---NGDLQFL----------GWNVPPDQIQ--YIPEHWLTQL -17== -------------RMSSG---SDELQFL----------GWNVPPDQIQ--YIPEHWLTQL -18== -------------AASMD-FGYPEGVSI----------VDFVRPEIKP--YVHQHWYNYP -19== -------------SGAAT-FGYPEGMTV----------ADFVPDRVKH--MVLDHWYNYP -20== ------------------------NGSV----------VDKVTPDMAH--LISPYWNQFP -21== ------------------------NGSV----------VDKVTPDMAH--LISPYWNQFP -22== ------------------------NGSV----------VDKVTPDMAH--LISPYWDQFP -23== -------------SG---------NGSV----------LDNVLPDMAH--LVNPYWSRFA -24== -------------GG---------NRSV----------LDNVLPDMAP--LVNPHWSRFA -25== -------------YGGQARF---NNQTV----------VDKVPPDMLH--LIDANWYQYP -26== -------------WPYQP------NASV----------VDTMPKEMLY--MIHEHWYAFP -27== -------------LVNQT-WWY--NPTV----------D------------IHPHWAKFD -28== -------------RDNET-WWY--NPSI----------V------------VHPHWREFD -29== AGSWAPHLLS---EVTAS-----PAPTW------------DAPPDNAS--GCGEQIN--- -30== ----MPHLLSGFLEVTAS-----PAPTW------------DAPPDNVS--GCGEQIN--- -31=p ----MPHLLSGFLEVTAS-----PAPTW------------DAPPDNVS--GCGEQIN--- -32== -------------NTTGI-----SDVTV-------------------------------- -33=p -------------NVTSI-----SDVTF-------------------------------- -34== -------------LVTSD-----FNDSYGLTGQFINGSHSSRSRDNAS--ANDTSATNMT -35=p -------------LVTSD-----FNDSYGLTGQFINGSHSSRSRDNAS--ANDTSATNMT -36== -------------NVTVV-----PNTTW---------WQASAPFDTPA--ALVRAAAK-- - - -1== --------------YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMA -2== --------------FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVA -3== --------------YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVA -4=p --------------FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVA -5=p --------------FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVA -6== --------------FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIA -7== --------------FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFG -8=opsin, ------------------------------------------------------------ -9== --------------YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVA -10== --------------YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVA -11== --------------YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFV -12== --------------YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVA -13== --------------YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVA -14== E--------PPESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFC -15== E--------PPESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFC -16== E--------PPASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVF -17== E--------PPASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVF -18== P--------VNPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALS -19== P--------VNPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALS -20== A--------MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS -21== A--------MDPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS -22== A--------MDPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAIS -23== P--------MDPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFS -24== P--------MDPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFS -25== P--------LNPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAIS -26== P--------MNPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFS -27== P--------IPDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMS -28== Q--------VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFS -29== ---------YGRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALA -30== ---------YGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALA -31=p ---------YGRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALA -32== ------------SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVT -33=p ------------SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVT -34== DDRYWSLTVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVA -35=p DDRYWSLTVYSHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVA -36== ------------------AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVA +9== DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT +10== DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT +11== DTTR--GSVFT-----YTNTNN-TRGPFEGPNY-------HIAPRWV---------YNLV +12== DTTR--DSVFT-----YTNSNN-TRGPFEGPNY-------HIAPRWV---------YNLT +13== NSSQ--AP-----------PNG-TPGPFDGPQW------PYQAPQST---------YVGV +14== ARLS--A----------ETRLLGWNVPPEELR--------HIPEHWLTYPEPPESMNYLL +15== ARLS--A----------ESRLLGWNVPPDELR--------HIPEHWLIYPEPPESMNYLL +16== AR-S--SG---N----GDLQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML +17== ARMS--SG---S----DELQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML +18== GAAS--MD-FGY----PEGVSIVDFVRPEIKP--------YVHQHWYNYPPVNPMWHYLL +19== GSGA--AT-FGY----PEGMTVADFVPDRVKH--------MVLDHWYNYPPVNPMWHYLL +20== S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL +21== S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL +22== S-----------------NGSVVDKVTPDMAH--------LISPYWDQFPAMDPIWAKIL +23== SSG---------------NGSVLDNVLPDMAH--------LVNPYWSRFAPMDPMMSKIL +24== TGG---------------NRSVLDNVLPDMAP--------LVNPHWSRFAPMDPTMSKIL +25== SYGG--QARF-------NNQTVVDKVPPDMLH--------LIDANWYQYPPLNPMWHGIL +26== GWPY--QP----------NASVVDTMPKEMLY--------MIHEHWYAFPPMNPLWYSIL +27== TLVN--QT-WWY------NPTVD------------------IHPHWAKFDPIPDAVYYSV +28== LRDN--ET-WWY------NPSIV------------------VHPHWREFDQVPDAVYYSL +29== PVAGSWAPHLLS------EVTASPAPTWDAPPDNASGCGEQIN--------YGRVEKVVI +30== ------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI +31=p ------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI +32== ---------------GQGNNTTSPPAPFET-GGNTTGISDVT---------VSYQ--VIT +33=p ---------------GQGNNTTASQEPFGT-GGNVTSISDVT---------FSYQ--VIT +34== SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT +35=p SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT +36== VVPN--TTWW------------QASAPFDTPAALVRAAAK-------------------- -1== NLFMVLFG-FTVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIV -2== DLFMVFGG-FTTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVV -3== DLFMACFG-FTVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIV -4=p GTIMVCFG-FTVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIV -5=p GAIMVCFG-FTVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIV -6== NLFVAIFG-SPLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLV -7== GFLLCIFS-VFPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIV -8=opsin, DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLV -9== DLAETVIA-STISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMV -10== DLAETVIA-STISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLV -11== DLVETLVA-STISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFV -12== DLGETVIA-STISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFV -13== DLLVTLCG-SSVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVV -14== DFMMMVK--TPIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNV -15== DFMMMIK--TPIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNV -16== DLIMCLK--APIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV -17== DLIMCLK--APIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNV -18== DLIMLTTN-VPFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNI -19== DLIMLTTN-FPPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNI -20== DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV -21== DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV -22== DFGIMITN-TPMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQV -23== DFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNV -24== DFCMMASQ-SPVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNV -25== NFLMMFCM-SPPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNV -26== DFCMMAFM-MPTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNV -27== DLSFSAINGFPLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNV -28== DFTFSLVNGFPLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNV -29== DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG -30== DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG -31=p DLSVAVAV-MPFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLG -32== DLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWA -33=p DLMVSVLV-LPMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWA -34== DLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWA -35=p DLMVAVLV-MPLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWA -36== DLLVACLV-MPLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWA - . : : * : : :*: +1== AAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSM +2== AAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSL +3== CCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAW +4=p ALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAI +5=p AVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAI +6== SVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFF +7== AAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVASC +8=opsin, ------------------------------------------DLAETVIA-STISIVNQV +9== SVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQV +10== SVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQV +11== SFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQI +12== SVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQI +13== AVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNI +14== GTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSF +15== GTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSF +16== GVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSF +17== GVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSF +18== GVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCF +19== GVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCF +20== TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY +21== TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY +22== TAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY +23== GLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY +24== GLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY +25== GFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCY +26== GVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCF +27== GIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAF +28== GIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF +29== GSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL +30== GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL +31=p GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL +32== SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV +33=p SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV +34== SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI +35=p SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI +36== AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEV + . + +1== N-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNTHAIM +2== H-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGENHAIM +3== N-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSATHAMM +4=p N-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSSHAFA +5=p N-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSTHASA +6== N-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTPHAIA +7== N-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSKHALT +8=opsin, S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV +9== Y-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAKLAIV +10== S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV +11== F-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSKLAII +12== S-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGKLAVA +13== N-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRRHAVS +14== H-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIA +15== H-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIA +16== H-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI +17== H-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI +18== SGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTGKAVV +19== SGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQGKATF +20== F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG +21== F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG +22== F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG +23== Y-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM +24== Y-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM +25== Y-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALI +26== A-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHKKATL +27== M-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFL +28== L-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFI +29== IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK +30== IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK +31=p IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK +32== L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA +33=p L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA +34== S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL +35=p S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL +36== V-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGM + : : * : : :*: : : -1== ICKPMGN-FRFGNTHAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPD -2== VCKPMSN-FRFGENHAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGID -3== VCKPMGN-FRFSATHAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPD -4=p VCKPMGS-FKFSSSHAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPD -5=p VCKPMGS-FKFSSTHASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPD -6== ICKPLGN-FTFKTPHAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPD -7== ICKPFGN-FRFSSKHALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPD -8=opsin, VCKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD -9== VCKPFGN-VRFDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD -10== VCKPFGN-VRFDAKLAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPD -11== VCKPFGN-IKFDSKLAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPD -12== VCKPFGN-IKFDGKLAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPD -13== VCKPLGD-FQFQRRHAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPN -14== ITRPMEG--KMTHGKAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFD -15== ITRPMEG--KMTHGKAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFD -16== ITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFD -17== ITKPMNR--NMTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFD -18== ICNGFNG-PKLTTGKAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYD -19== ICNGFNG-PKLTQGKATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYD -20== IVKGMAG-RPMTIPLALGKM---------------------------YVPEGNLTSCGID -21== IVKGMAG-RPMTIPLALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGID -22== IVKGMAG-RPMTIPLALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGID -23== IVKGING-TPMTIKTSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSID -24== IVKGING-TPMTIKTSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSID -25== IVKGLSG-KPLSINGALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTD -26== IVRGMAA-APLTHKKATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVD -27== IGRPMAASKKMSHRRAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFD -28== IGRPMAASKKMSHRRAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFD -29== ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD -30== ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD -31=p ITRPLTYPVRQNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQD -32== ITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKD -33=p ITDPIDYVNKRTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKD -34== VTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQD -35=p VTS-IDYIRRRSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQD -36== VTN-IDYIHASTAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQD - : : : +1== GVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESYVVYMF +2== GVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMF +3== GIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMF +4=p GIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESYVIYMF +5=p GIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMF +6== GCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESYVMFLF +7== VVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLF +8=opsin, GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM +9== GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM +10== GIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM +11== GIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSFMLTLM +12== GILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLM +13== GCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--NSYILSLF +14== MIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF +15== MIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF +16== MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF +17== MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF +18== FALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSYNIFIF +19== MCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITYNICIF +20== KM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIFYS +21== KIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS +22== KIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS +23== KILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSYLITYS +24== KIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSYLITYS +25== RIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASYLVCYG +26== LLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASYVVIYG +27== MIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSFILCMY +28== MIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSNILCMF +29== MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST +30== MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST +31=p MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST +32== LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST +33=p LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST +34== MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST +35=p MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST +36== MIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GYQIFAT + : -1== YYTLNPNFNNESYVVYMFVVHFLVPFVIIFFCYGRLLCTV----KE-------------- -2== YYTLKPEVNNESFVIYMFVVHFTIPMIVIFFCYGQLVFTV----KE-------------- -3== YYTHNPDYHNESYVLYMFVIHFIIPVVVIFFSYGRLICKV----RE-------------- -4=p YYTLNPDYNNESYVIYMFVCHFILPVAVIFFTYGRLVCTV----KA-------------- -5=p YYTLNPEYNNESYVLYMFICHFILPVTIIFFTYGRLVCTV----KA-------------- -6== WYTTNNKYNNESYVMFLFCFCFAVPFGTIVFCYGQLLITL----KL-------------- -7== WYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRAL----KA-------------- -8=opsin, VFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA-------------- -9== VFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA-------------- -10== VFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAI----RA-------------- -11== VFSGSVELGCQSFMLTLMITCCFLPLFIIIVCYLQVWMAI----RA-------------- -12== VFSGSSDPGVQSYMVVLMVTCCFFPLAIIILCYLQVWLAI----RA-------------- -13== WYTGGSNN--NSYILSLFVTCFVLPLSLILFSYTNLLLTL----RA-------------- -14== YLT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA-------------- -15== YLT--DNFDTRLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA-------------- -16== YLS--DNFDTRLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKA-------------- -17== YLS--DNFDTRLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKA-------------- -18== YLT--QDFNTFSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAA-------------- -19== YFT--RDMNTITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAA-------------- -20== YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- -21== YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- -22== YLE--RDWNPRSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA-------------- -23== YMT--RMWNPRSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKA-------------- -24== YMT--RQWNPRSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKA-------------- -25== YFN--RGLLSASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKN-------------- -26== YLT--KDWSSASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQ-------------- -27== YLS--TDPSTRSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKE-------------- -28== YIS--RDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKE-------------- -29== F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- -30== F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- -31=p F----------GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF----------- -32== H----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK-------------- -33=p H----------GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK-------------- -34== K----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEE -35=p K----------GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEE -36== V----------GYQIFATASSFYVPVLIILILYWRIYQTARKRIR--------------- - * : * : +1== VVHFLVPFVIIFFCYGRLLCTV----KEAAAAQQ-------------------------- +2== VVHFTIPMIVIFFCYGQLVFTV----KEAAAQQQ-------------------------- +3== VIHFIIPVVVIFFSYGRLICKV----REAAAQQQ-------------------------- +4=p VCHFILPVAVIFFTYGRLVCTV----KAAAAQQQ-------------------------- +5=p ICHFILPVTIIFFTYGRLVCTV----KAAAAQQQ-------------------------- +6== CFCFAVPFGTIVFCYGQLLITL----KLAAKAQA-------------------------- +7== IFCFIVPLSLICFSYTQLLRAL----KAVAAQQQ-------------------------- +8=opsin, VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- +9== VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- +10== VTCCIIPLAIIMLCYLQVWLAI----RAVAKQQK-------------------------- +11== ITCCFLPLFIIIVCYLQVWMAI----RAVAAQQK-------------------------- +12== VTCCFFPLAIIILCYLQVWLAI----RAVAAQQK-------------------------- +13== VTCFVLPLSLILFSYTNLLLTL----RAAAAQQK-------------------------- +14== FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- +15== FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- +16== FFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKK------------------------- +17== LFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKK------------------------- +18== VFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- +19== IFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- +20== IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- +21== IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- +22== IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- +23== LFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKK------------------------- +24== LFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKK------------------------- +25== IWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKK------------------------- +26== LAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKK------------------------- +27== FCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKR------------------------- +28== ILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKR------------------------- +29== AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- +30== AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- +31=p AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- +32== FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- +33=p FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- +34== VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY +35=p VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY +36== ASSFYVPVLIILILYWRIY-------QTARKRIR-------------------------- + * : * : -1== ------------------------------------------------------AAAAQQ -2== ------------------------------------------------------AAAQQQ -3== ------------------------------------------------------AAAQQQ -4=p ------------------------------------------------------AAAQQQ -5=p ------------------------------------------------------AAAQQQ -6== ------------------------------------------------------AAKAQA -7== ------------------------------------------------------VAAQQQ -8=opsin, ------------------------------------------------------VAKQQK -9== ------------------------------------------------------VAKQQK -10== ------------------------------------------------------VAKQQK -11== ------------------------------------------------------VAAQQK -12== ------------------------------------------------------VAAQQK -13== ------------------------------------------------------AAAQQK -14== ------------------------------------------------------LRDQAK -15== ------------------------------------------------------LRDQAK -16== ------------------------------------------------------LREQAK -17== ------------------------------------------------------LREQAK -18== ------------------------------------------------------MRAQAK -19== ------------------------------------------------------MRAQAK -20== ------------------------------------------------------MREQAK -21== ------------------------------------------------------MREQAK -22== ------------------------------------------------------MREQAK -23== ------------------------------------------------------MREQAK -24== ------------------------------------------------------MRDQAK -25== ------------------------------------------------------MREQAK -26== ------------------------------------------------------LREQAK -27== ------------------------------------------------------MAAMAK -28== ------------------------------------------------------MAAMAK -29== --------------------------------------------P----GFPRVEPDSVI -30== --------------------------------------------P----GFPRVQPESVI -31=p --------------------------------------------P----GFPRVQPESVI -32== -------------------------TVKKVEKTGADTRHGASPAP---------QPKKS- -33=p -------------------------TVRKVEKKGAGTSLGTSSAP---------PPKKS- -34== TTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENAN -35=p TTLVASPKTEYSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENAN -36== ------------------------------RRRGATARGGVGPPP---------VPAGGA +1== ------------------------------------------------------------ +2== ------------------------------------------------------------ +3== ------------------------------------------------------------ +4=p ------------------------------------------------------------ +5=p ------------------------------------------------------------ +6== ------------------------------------------------------------ +7== ------------------------------------------------------------ +8=opsin, ------------------------------------------------------------ +9== ------------------------------------------------------------ +10== ------------------------------------------------------------ +11== ------------------------------------------------------------ +12== ------------------------------------------------------------ +13== ------------------------------------------------------------ +14== --------------------------------------------------MN-------- +15== --------------------------------------------------MN-------- +16== --------------------------------------------------MN-------- +17== --------------------------------------------------MN-------- +18== --------------------------------------------------MN-------- +19== --------------------------------------------------MN-------- +20== --------------------------------------------------MN-------- +21== --------------------------------------------------MN-------- +22== --------------------------------------------------MN-------- +23== --------------------------------------------------MN-------- +24== --------------------------------------------------MN-------- +25== --------------------------------------------------MN-------- +26== --------------------------------------------------MN-------- +27== --------------------------------------------------LN-------- +28== --------------------------------------------------LN-------- +29== ---------------------------------PGFPRV----EPDSVIALNG------- +30== ---------------------------------PGFPRV----QPESVISLNG------- +31=p ---------------------------------PGFPRV----QPESVISLNG------- +32== --------------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR-- +33=p --------------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG-- +34== SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- +35=p SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- +36== -------------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGIA 1== ------------------------------------------------------------ @@ -280,217 +280,179 @@ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ------------------------------------------------------------ -14== KMN---------------VESLRS------------------------------------ -15== KMN---------------VDSLRS------------------------------------ -16== KMN---------------VESLRS------------------------------------ -17== KMN---------------VESLRS------------------------------------ -18== KMN---------------VSTLRS------------------------------------ -19== KMN---------------VTNLRS------------------------------------ -20== KMN---------------VKSLRS------------------------------------ -21== KMN---------------VKSLRS------------------------------------ -22== KMN---------------VKSLRS------------------------------------ -23== KMN---------------VKSLRS------------------------------------ -24== KMN---------------VKSLRS------------------------------------ -25== KMN---------------VASLRS------------------------------------ -26== KMN---------------VASLRA------------------------------------ -27== RLN---------------AKELR------------------------------------- -28== RLN---------------AKELR------------------------------------- -29== ALNG--------------IVKLQ----------------------KEVEECANLSR---- -30== SLNG--------------VVKLQ----------------------KEVEECANLSR---- -31=p SLNG--------------VVKLQ----------------------KEVEECANLSR---- -32== -VNGESGSRNWRL-----GVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPL -33=p -LNGQPGSGDWRR-----CAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPL -34== GVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAMLERQ-CNNGKKISSN -35=p GVNSNSSS----------SERLKQIQIETAEAFANGCAEEASIAMLERQ-CNNGKKISSN -36== LVAGGGSGGIAAAVVAVIGRPLPTISETTTTGFTNVSSNNTS---PEKQSCANGLEADPP +14== --VESL------------------------------------------------------ +15== --VDSL------------------------------------------------------ +16== --VESL------------------------------------------------------ +17== --VESL------------------------------------------------------ +18== --VSTL------------------------------------------------------ +19== --VTNL------------------------------------------------------ +20== --VKSL------------------------------------------------------ +21== --VKSL------------------------------------------------------ +22== --VKSL------------------------------------------------------ +23== --VKSL------------------------------------------------------ +24== --VKSL------------------------------------------------------ +25== --VASL------------------------------------------------------ +26== --VASL------------------------------------------------------ +27== --AKEL------------------------------------------------------ +28== --AKEL------------------------------------------------------ +29== --IVKL----------------------QK---------EVEECAN-------------- +30== --VVKL----------------------QK---------EVEECAN-------------- +31=p --VVKL----------------------QK---------EVEECAN-------------- +32== -------NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAG-- +33=p -------DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESG-- +34== -------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- +35=p -------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- +36== AAVVAVIGRPLPTISETTTTGFTNVSS----NNTSP---EKQSCANGLEADPPTTGYGAV -1== --------------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVA -2== --------------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVA -3== --------------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVA -4=p --------------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVA -5=p --------------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVA -6== --------------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFS -7== --------------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFA -8=opsin, --------------------ESESTQK------AEKEVTRMVVVMVLAFC---------- -9== --------------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFA -10== --------------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFA -11== --------------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFV -12== --------------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFA -13== --------------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFA -14== -------------------NVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMS -15== -------------------NVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMS -16== -------------------NVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMS -17== -------------------NVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMS -18== --------------------NEADAQR------AEIRIAKTALVNVSLWFICWTPYALIS -19== --------------------NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAIT -20== --------------------SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVIN -21== --------------------SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVIN -22== --------------------SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVIN -23== --------------------SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVIC -24== --------------------SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIIC -25== --------------------SENQNTS------AECKLAKVALMTISLWFMAWTPYLVIN -26== -------------------NADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIIS -27== --------------------KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIA -28== --------------------KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVA -29== --------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS -30== --------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS -31=p --------------LLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLS -32== PSEAG--PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA -33=p PSESG--SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVA -34== DTPYS-------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIA -35=p DTPYS-------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIA -36== TTGYGAVAAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLA - * . : +1== -------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT-H +2== -------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFT-H +3== -------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT-N +4=p -------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVAAWIFF-N +5=p -------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVAAWIFF-N +6== -------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVS-H +7== -------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN-N +8=opsin, -------------ESESTQK------AEKEVTRMVVVMVLAFC----------------- +9== -------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA-N +10== -------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA-N +11== -------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFVSFAAA-N +12== -------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA-N +13== -------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFALVVAT-H +14== ----------RSNVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMSLIGAF-G +15== ----------RSNVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMSLIGAF-G +16== ----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G +17== ----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G +18== ----------RS-NEADAQR------AEIRIAKTALVNVSLWFICWTPYALISLKGVM-G +19== ----------RS-NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAITIQGLL-G +20== ----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K +21== ----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K +22== ----------RS-SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVINCMGLF-K +23== ----------RS-SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVICYFGLF-K +24== ----------RS-SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIICYFGLF-K +25== ----------RS-SENQNTS------AECKLAKVALMTISLWFMAWTPYLVINFSGIF-N +26== ----------RANADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIISWAGVF-S +27== ----------R--KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIALLAQF-G +28== ----------R--KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-G +29== ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC +30== ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC +31=p ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC +32== PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C +33=p SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C +34== -----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V +35=p -----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V +36== AAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-C + * . : -1== FYIFT-HQGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC------ -2== MYIFT-HQGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC------ -3== FWIFT-NKGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC------ -4=p AWIFF-NKGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC------ -5=p AWIFF-NKGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC------ -6== LWIVS-HRGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC------ -7== MYMVN-NRNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC------ +1== QGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC--------GKNPL +2== QGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC--------GKNPL +3== KGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC--------GKNPF +4=p KGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC--------GKNPL +5=p KGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC--------GKNPL +6== RGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC--------GKN-I +7== RNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC--------GKA-M 8=opsin, ------------------------------------------------------------ -9== CFAAA-NPGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF------- -10== CFAAA-NPGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF------- -11== SFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF------- -12== CFAAA-NPGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF------- -13== LVVAT-HKGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY--- -14== LIGAF-GDKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL--- -15== LIGAF-GDKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI--- -16== LIGAF-GDKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV--- -17== LIGAF-GDKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV--- -18== LKGVM-GDTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV--- -19== IQGLL-GNAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV--- -20== CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- -21== CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- -22== CMGLF-KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF--- -23== YFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF--- -24== YFGLF-KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC--- -25== FSGIF-NL-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC--- -26== WAGVF-SSGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC--- -27== LLAQF-GPAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQ -28== LLAQF-GPLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQ -29== TARPFICGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQC------ -30== TARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQC------ -31=p TARPFICGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQC------ -32== LVLPF-CESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKC------ -33=p LVLPF-CESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKC------ -34== LIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFG------ -35=p LIGPF-VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFG------ -36== ILVPT-CDCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCG------ +9== PGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V +10== PGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V +11== PGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF---------GKK-V +12== PGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF---------GKK-V +13== KGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY----QPQR-T +14== DKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------N +15== DKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------S +16== DKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------N +17== DKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------N +18== DTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HE-T +19== NAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HE-K +20== F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V +21== F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V +22== F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V +23== I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GN-T +24== I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GT-T +25== L-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------A-A +26== SGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GS-G +27== PAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKE-C +28== PLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE-T +29== GTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- +30== GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYR----NINR-- +31=p GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- +32== ESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RQ---- +33=p ESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RR---- +34== DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- +35=p DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- +36== DCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRV----RRRR-- -1== --GKNPLGDDE--SGASTSKTEVSSVS-TSPVS--------------------------- -2== --GKNPLGDDE--ASATASKTE------TSQVA--------------------------- -3== --GKNPFGDEDVSSTVSQSKTEVSSVS-SSQVS--------------------------- -4=p --GKNPLGDDE-SSTVSTSKTEVSS------VS--------------------------- -5=p --GKNPLGDEE-SSTVSTSKTEVSS------VS--------------------------- -6== --GKN-IEEDE--ASTSSQVTQVSS------VA--------------------------- -7== --GKA-MTDES--DTCSSQKTEVSTVS-STQVG--------------------------- +1== GDDE--SGASTSKTEVSSVS-TSPVSPA-------------------------------- +2== GDDE--ASATASKTE------TSQVAPA-------------------------------- +3== GDEDVSSTVSQSKTEVSSVS-SSQVSPA-------------------------------- +4=p GDDE-SSTVSTSKTEVSS------VSPA-------------------------------- +5=p GDEE-SSTVSTSKTEVSS------VSPA-------------------------------- +6== EEDE--ASTSSQVTQVSS------VAPEK------------------------------- +7== TDES--DTCSSQKTEVSTVS-STQVGPN-------------------------------- 8=opsin, ------------------------------------------------------------ -9== --GKK-VDDGS--ELSSASKTEVSSV---SSVS--------------------------- -10== --GKK-VDDGS--ELSSASKTEVSSV---SSVS--------------------------- -11== --GKK-VDDGS--EASTTSRTEVSSVS-NSSVA--------------------------- -12== --GKK-VDDGS--EVST-SRTEVSSVS-NSSVS--------------------------- -13== -QPQR-TGKAS--PGTPGPHADVTAAGLRNKVM--------------------------- -14== ---NE-KAPES----SAVASTSTTQEPQQTTAA--------------------------- -15== ---SE-KAPES----RAAISTSTTQEQQQTTAA--------------------------- -16== ---NE-KSGEI----SSAQSTTTQEQ-QQTTAA--------------------------- -17== ---NE-KSGEA----SSAQSTTTQEQTQQTSAA--------------------------- -18== ---HE-TETKS-NDDSQSNSTVAQDKA--------------------------------- -19== ---HE-KDPND-VEENQSSNTQTQEKS--------------------------------- -20== ---GK-VDDGK-SSDAQSQATASEAESKA------------------------------- -21== ---GK-VDDGK-SSDAQSQATASEAESKA------------------------------- -22== ---GK-VDDGK-SSEAQSQATTSEAESKA------------------------------- -23== ---GN-TDEPKPDAPASDTETTSEADSKA------------------------------- -24== ---GT-TDEPKPDAPPSDTETTSEAESKD------------------------------- -25== ----A-AEPSS-DAVSTTSGTTTVTDNEKSNA---------------------------- -26== ---GS-GESGS-DVKSEASATTTMEEKPKIPEA--------------------------- -27== FDEKE-CEDAN-DAEEEVVASER--GGESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQG -28== FDDKE-TEDDK-DAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQQQQAAY----PPQG -29== ---QY-RNINR--KLSAAGMHEALKLAER------------------------------- -30== ---QY-RNINR--KLSAAGMHEALKLAER------------------------------- -31=p ---QY-RNINR--KLSAAGMHEALKLAER------------------------------- -32== ---KF-CRQ--------------------------------------------------- -33=p ---KF-CRR--------------------------------------------------- -34== ---KY-RRGHR------------------------------------------------- -35=p ---KY-RRGHR------------------------------------------------- -36== ---RR-VRRRR--A---------------------------------------------- - - -1== -----------------------------------PA----------------------- -2== -----------------------------------PA----------------------- -3== -----------------------------------PA----------------------- -4=p -----------------------------------PA----------------------- -5=p -----------------------------------PA----------------------- -6== -----------------------------------PEK---------------------- -7== -----------------------------------PN----------------------- -8=opsin, ------------------------------------------------------------ -9== -----------------------------------PA----------------------- -10== -----------------------------------PA----------------------- -11== -----------------------------------PA----------------------- -12== -----------------------------------PA----------------------- -13== -----------------------------------PAHPV-------------------- -14== ------------------------------------------------------------ -15== ------------------------------------------------------------ -16== ------------------------------------------------------------ -17== ------------------------------------------------------------ -18== ------------------------------------------------------------ -19== ------------------------------------------------------------ -20== ------------------------------------------------------------ -21== ------------------------------------------------------------ -22== ------------------------------------------------------------ -23== ------------------------------------------------------------ -24== ------------------------------------------------------------ -25== ------------------------------------------------------------ -26== ------------------------------------------------------------ -27== Y--PPQGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAY -28== YAPPPQGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAY -29== -----------------------------------PERPEFVL-QNADYCRKKGHDS--- -30== -----------------------------------PERSEFVL-QNSDHCGKKGHDT--- -31=p -----------------------------------PERSEFVL-QNSDHCGKKGHDT--- +9== DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- +10== DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- +11== DDGS--EASTTSRTEVSSVS-NSSVAPA-------------------------------- +12== DDGS--EVST-SRTEVSSVS-NSSVSPA-------------------------------- +13== GKAS--PGTPGPHADVTAAGLRNKVMPAHPV----------------------------- +14== EKAP--ESSAVASTSTTQEP--QQTTAA-------------------------------- +15== EKAP--ESRAAISTSTTQEQ--QQTTAA-------------------------------- +16== EKSG--EISSAQST-TTQEQ--QQTTAA-------------------------------- +17== EKSG--EASSAQST-TTQEQ-TQQTSAA-------------------------------- +18== ETKS--NDDSQSNSTVAQDK-A-------------------------------------- +19== DPND--VEENQSSNTQTQEK-S-------------------------------------- +20== DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- +21== DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- +22== DDGK--SSEAQSQA-TTSEA-ESKA----------------------------------- +23== DEPK--PDAPASDTETTSEA-DSKA----------------------------------- +24== DEPK--PDAPPSDTETTSEA-ESKD----------------------------------- +25== EPSS--DAVSTTSGTTTVTD-NEKSNA--------------------------------- +26== ESGS--DVKSEASATTTMEE-KPKIPEA-------------------------------- +27== EDAN--DAEEEVVASER--G-GESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PP +28== EDDK--DAETEIPAGESSDA-APSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPP +29== ------KLSAAGMHEALKLAERPERPEF------------VLQNADY------------- +30== ------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- +31=p ------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- 32== ------------------------------------------------------------ 33=p ------------------------------------------------------------ 34== ------------------------------------------------------------ 35=p ------------------------------------------------------------ -36== -----------------------------------PQ----------------------- +36== ------A---------------PQ------------------------------------ -1== -- -2== -- -3== -- -4=p -- -5=p -- -6== -- -7== -- -8=opsin, -- -9== -- -10== -- -11== -- -12== -- -13== -- -14== -- -15== -- -16== -- -17== -- -18== -- -19== -- -20== -- -21== -- -22== -- -23== -- -24== -- -25== -- -26== -- -27== QA -28== QA -29== -- -30== -- -31=p -- -32== -- -33=p -- -34== -- -35=p -- -36== -- - +1== --------------------------------------------------------- +2== --------------------------------------------------------- +3== --------------------------------------------------------- +4=p --------------------------------------------------------- +5=p --------------------------------------------------------- +6== --------------------------------------------------------- +7== --------------------------------------------------------- +8=opsin, --------------------------------------------------------- +9== --------------------------------------------------------- +10== --------------------------------------------------------- +11== --------------------------------------------------------- +12== --------------------------------------------------------- +13== --------------------------------------------------------- +14== --------------------------------------------------------- +15== --------------------------------------------------------- +16== --------------------------------------------------------- +17== --------------------------------------------------------- +18== --------------------------------------------------------- +19== --------------------------------------------------------- +20== --------------------------------------------------------- +21== --------------------------------------------------------- +22== --------------------------------------------------------- +23== --------------------------------------------------------- +24== --------------------------------------------------------- +25== --------------------------------------------------------- +26== --------------------------------------------------------- +27== QGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA +28== QGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA +29== --------------------------------------------CRKKGHDS----- +30== --------------------------------------------CGKKGHDT----- +31=p --------------------------------------------CGKKGHDT----- +32== --------------------------------------------------------- +33=p --------------------------------------------------------- +34== --------------------------------------------------------- +35=p --------------------------------------------------------- +36== --------------------------------------------------------- +