diff test-data/mafft_kimura40.phylip.aln @ 15:bf28a8cff401 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/mafft_kimura40.phylip.aln	Wed Mar 20 07:34:52 2024 +0000
@@ -0,0 +1,77 @@
+ 3 948
+MZ681498.1 atgcatgtat aagtataacc tgccagacag ggaaactgcg gacggctcat
+MZ681497.1 ---------- ---------- ---------- -----ctgcg gacggctcat
+ON855043.1 ---------- ---------- -ggccgtca- -----ctccg gggggacaac
+
+           tacaacagcc ttaatttact tgaccttgac aacctacttg gataactgcg
+           tacaacagcc ttaatttact tgaccttgac aacctacttg gataactgcg
+           acaaacgccc tgagggcttt actcgttggg gtgcaaactg ga--------
+
+           gtaattctgg agctaataca tgcaccaaag ctccgatccc tcgtggagag
+           gtaattctgg agctaataca tgcaccaaag ctccgatccc tcgtggagag
+           ---------- ---------- ---------- ---------- ---tcgagtg
+
+           gagcgcattt gttcgccaca aaaccaaacg ccccacaagg gcgttcagtg
+           gagcgcattt gttcgccaca aaaccaaacg ccccacaagg gcgttcagtg
+           gcgcacacat cccttccacg caa--agacc tgctgaagag gtcggaggcg
+
+           ttgactcaga ataact---- ---------- -------aag ctgatcgcac
+           ttgactcaga ataact---- ---------- -------aag ctgatcgcac
+           atgagtccga gcaaccccac aagcaaccag gttggggaag ctg--cacac
+
+           ggtctt---- ---------- ----gcaccg gcgacgtgtc tttcaagtgt
+           ggtctt---- ---------- ----gcaccg gcgacgtgtc tttcaagtgt
+           gatactggga tgcacgcccc cagggcacct aacggctgcc gctggcgtct
+
+           ctgccttatc aactttcgat ggtagtgtat ctgcctacca tggttgtgac
+           ctgccttatc aactttcgat ggtagtgtat ctgcctacca tggttgtgac
+           gtgcgtcgtt ga---gcagt tgttgcgcac ttgctt---- ttgtcggagc
+
+           gggtaacgga ggataagggt tcgactccgg agaaggggcc tgagaaatgg
+           gggtaacgga ggataagggt tcgactccgg agaaggggcc tgagaaatgg
+           tgtactcgga gcatgctggc atggacccac acaaaag--- ----------
+
+           ccactacgtc taaggatggc agcaggcgcg caaattaccc actctcaaca
+           ccactacgtc taaggatggc agcaggcgcg caaattaccc actctcaaca
+           ---------- --tgtgtggc agcggccaca ca------cc cctgtccatg
+
+           cgctgaggag gtagtgaaga gaaataacga gaccgttctc acatgaggcc
+           cgctgaggag gtagtgaaga gaaataacga gaccgttctc acatgaggcc
+           tcctacgga- ---------- -ccgtagcta gggcgtgct- ----------
+
+           ggtcatcgga atgggtacaa cttaaaccct ttaacgagta tctatgagag
+           ggtcatcgga atgggtacaa cttaaaccct ttaacgagta tctatgagag
+           ---------- ---------- ---------- ---------- ----------
+
+           ggcaagtctg gtgccagcag ccgcggtaat tccagctctc aaaatgcata
+           ggcaagtctg gtgccagcag ccgcggtaat tccagctctc aaaatgcata
+           ---------- ---------- -ctgggtttc ttcggctggc agtgttgcta
+
+           gaattattgc tgcggttaaa aagctcgtag ttggatctgt gctggccgcc
+           gaattattgc tgcggttaaa aagctcgtag ttggatctgt gctggccgcc
+           cgtccgtggc tgtgatgaga cgacgcg--- ---------- ----------
+
+           cggtctgctc gctgagcacg cactggtgcg gtcggctttc ctgcccggta
+           cggtctgctc gctgagcacg cactggtgcg gtcggctttc ctgcccggta
+           ---------- -----gtagg gccttgtgcg atgcgcct-- ----------
+
+           cctccccggc gttggccttc accggtcggc gtcggtggcc gggcgagttt
+           cctccccggc gttggccttc accggtcggc gtcggtggcc gggcgagttt
+           --------gc acttggctta a--------- ------gact tgatgagctc
+
+           actttgaaca aatcagag-- -----tgctt caaacaggcg tttcgcttga
+           actttgaaca aatcagag-- -----tgctt caaacaggcg tttcgcttga
+           actgcgaaga gccgccagca accttttttt catatacatt ttttacaggc
+
+           atgttcgtgc atggaataat agaagaggat ttcggtccga ttttgttggt
+           atgttcgtgc atggaataat agaagaggat ttcggtccga ttttgttggt
+           acacttgtgt gctgatgaac aaaa------ ---------- ----------
+
+           tttgctgacc gagataatgg ttaacagaga caaacggggc cattcgtatt
+           tttgctgacc gagataatgg ttaacagaga caaacggggc cattcgtatt
+           ---------- ---------- ---------- ---------- -------att
+
+           gctacgtgag aggtg----- ---------- ---------- --------
+           gctacgtgag aggtgaaatt cttggaccgt agcaagacgg actacagc
+           ctagccttat cggtggatca ctcggctcgt aggtcgatg- --------
+