Mercurial > repos > rnateam > mafft

diff test-data/sample_nuc.fa @ 15:bf28a8cff401 draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 2f6456c314c010fd73f5eeaf809a9afce47353af
author bgruening
date Wed, 20 Mar 2024 07:34:52 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/sample_nuc.fa	Wed Mar 20 07:34:52 2024 +0000
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+>MZ681498.1 Rotylenchus bunae isolate GE29E-RO6 small subunit ribosomal RNA gene, partial sequence
+ATGCATGTATAAGTATAACCTGCCAGACAGGGAAACTGCGGACGGCTCATTACAACAGCCTTAATTTACT
+TGACCTTGACAACCTACTTGGATAACTGCGGTAATTCTGGAGCTAATACATGCACCAAAGCTCCGATCCC
+TCGTGGAGAGGAGCGCATTTGTTCGCCACAAAACCAAACGCCCCACAAGGGCGTTCAGTGTTGACTCAGA
+ATAACTAAGCTGATCGCACGGTCTTGCACCGGCGACGTGTCTTTCAAGTGTCTGCCTTATCAACTTTCGA
+TGGTAGTGTATCTGCCTACCATGGTTGTGACGGGTAACGGAGGATAAGGGTTCGACTCCGGAGAAGGGGC
+CTGAGAAATGGCCACTACGTCTAAGGATGGCAGCAGGCGCGCAAATTACCCACTCTCAACACGCTGAGGA
+GGTAGTGAAGAGAAATAACGAGACCGTTCTCACATGAGGCCGGTCATCGGAATGGGTACAACTTAAACCC
+TTTAACGAGTATCTATGAGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCTCAAAATGCAT
+AGAATTATTGCTGCGGTTAAAAAGCTCGTAGTTGGATCTGTGCTGGCCGCCCGGTCTGCTCGCTGAGCAC
+GCACTGGTGCGGTCGGCTTTCCTGCCCGGTACCTCCCCGGCGTTGGCCTTCACCGGTCGGCGTCGGTGGC
+CGGGCGAGTTTACTTTGAACAAATCAGAGTGCTTCAAACAGGCGTTTCGCTTGAATGTTCGTGCATGGAA
+TAATAGAAGAGGATTTCGGTCCGATTTTGTTGGTTTTGCTGACCGAGATAATGGTTAACAGAGACAAACG
+GGGCCATTCGTATTGCTACGTGAGAGGTG
+
+>MZ681497.1 Rotylenchus bunae isolate GE29A-R1 small subunit ribosomal RNA gene, partial sequence
+CTGCGGACGGCTCATTACAACAGCCTTAATTTACTTGACCTTGACAACCTACTTGGATAACTGCGGTAAT
+TCTGGAGCTAATACATGCACCAAAGCTCCGATCCCTCGTGGAGAGGAGCGCATTTGTTCGCCACAAAACC
+AAACGCCCCACAAGGGCGTTCAGTGTTGACTCAGAATAACTAAGCTGATCGCACGGTCTTGCACCGGCGA
+CGTGTCTTTCAAGTGTCTGCCTTATCAACTTTCGATGGTAGTGTATCTGCCTACCATGGTTGTGACGGGT
+AACGGAGGATAAGGGTTCGACTCCGGAGAAGGGGCCTGAGAAATGGCCACTACGTCTAAGGATGGCAGCA
+GGCGCGCAAATTACCCACTCTCAACACGCTGAGGAGGTAGTGAAGAGAAATAACGAGACCGTTCTCACAT
+GAGGCCGGTCATCGGAATGGGTACAACTTAAACCCTTTAACGAGTATCTATGAGAGGGCAAGTCTGGTGC
+CAGCAGCCGCGGTAATTCCAGCTCTCAAAATGCATAGAATTATTGCTGCGGTTAAAAAGCTCGTAGTTGG
+ATCTGTGCTGGCCGCCCGGTCTGCTCGCTGAGCACGCACTGGTGCGGTCGGCTTTCCTGCCCGGTACCTC
+CCCGGCGTTGGCCTTCACCGGTCGGCGTCGGTGGCCGGGCGAGTTTACTTTGAACAAATCAGAGTGCTTC
+AAACAGGCGTTTCGCTTGAATGTTCGTGCATGGAATAATAGAAGAGGATTTCGGTCCGATTTTGTTGGTT
+TTGCTGACCGAGATAATGGTTAACAGAGACAAACGGGGCCATTCGTATTGCTACGTGAGAGGTGAAATTC
+TTGGACCGTAGCAAGACGGACTACAGC
+
+>ON855043.1 Rotylenchus sp. JQ-2022 internal transcribed spacer 1 and 5.8S ribosomal RNA gene, partial sequence
+GGCCGTCACTCCGGGGGGACAACACAAACGCCCTGAGGGCTTTACTCGTTGGGGTGCAAACTGGATCGAG
+TGGCGCACACATCCCTTCCACGCAAAGACCTGCTGAAGAGGTCGGAGGCGATGAGTCCGAGCAACCCCAC
+AAGCAACCAGGTTGGGGAAGCTGCACACGATACTGGGATGCACGCCCCCAGGGCACCTAACGGCTGCCGC
+TGGCGTCTGTGCGTCGTTGAGCAGTTGTTGCGCACTTGCTTTTGTCGGAGCTGTACTCGGAGCATGCTGG
+CATGGACCCACACAAAAGTGTGTGGCAGCGGCCACACACCCCTGTCCATGTCCTACGGACCGTAGCTAGG
+GCGTGCTCTGGGTTTCTTCGGCTGGCAGTGTTGCTACGTCCGTGGCTGTGATGAGACGACGCGGTAGGGC
+CTTGTGCGATGCGCCTGCACTTGGCTTAAGACTTGATGAGCTCACTGCGAAGAGCCGCCAGCAACCTTTT
+TTTCATATACATTTTTTACAGGCACACTTGTGTGCTGATGAACAAAAATTCTAGCCTTATCGGTGGATCA
+CTCGGCTCGTAGGTCGATG
+