Mercurial > repos > rnateam > mafft
view test-data/mafft_nwns_result.aln @ 8:4de39704d423 draft
"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 7f48fa9f0c2ef08ffe621a8215ea307ab780b9b5"
| author | bgruening |
|---|---|
| date | Sat, 13 Mar 2021 22:18:32 +0000 |
| parents | aaefa93c2dd2 |
| children |
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CLUSTAL format alignment by MAFFT NW-NS-2 (v7.455) 1== ----------------------------------------MNG----------------T 2== ----------------------------------------MNG----------------T 3== ----------------------------------------MNG----------------T 4=p ----------------------------------------MNG----------------T 5=p ----------------------------------------MNG----------------T 6== ----------------------------------------MKQ----------------V 7== ----------------------------------------MRK----------------M 8=opsin, ------------------------------------------------------------ 9== ----------------------------------------MAQQWSLQRLAGRHPQDSYE 10== ----------------------------------------MAQQWSLQRLAGRHPQDSYE 11== ----------------------------------------MTEAWNVAVFAARRSRDD-D 12== ----------------------------------------MAA-WEAAFAARRRHEE--E 13== ----------------------------------------MS-----------------S 14== ----------MESGNVSS------------SLFGNVST-ALRP----------------E 15== ----------MEYHNVSS------------VL-GNVSS-VLRP----------------D 16== ----------ME------------------PL-CNASEPPLRP----------------E 17== ----------MD------------------AL-CNASEPPLRP----------------E 18== --------------------------------MTNATGPQMAY----------------Y 19== --------------------------------MANVTGPQMAF----------------Y 20== ----------ME----SF------------AVAAAQLGPHFAP----------------L 21== ----------ME----SF------------AVAAAQLGPHFAP----------------L 22== ----------MD----SF------------AAVATQLGPQFAA----------------P 23== -----MERSHLP----ET------------PFDLAHSGPRFQA----------------Q 24== -----MERSLLP----EP------------PLAMALLGPRFEA----------------Q 25== --------------------------------MIAVSGPSYEA----------------F 26== ----------------------------------MANQLSYSS----------------L 27== ---------------------------------------MVES----------------T 28== ----------------------------------------MGR----------------D 29== ---------MMDVNSSGRPDLYGHLRSFL-LPEVGRGLPDLSPDGGA------------D 30== ------------------------------------------------------------ 31=p ------------------------------------------------------------ 32== ----------MDVLSP-------------------------------------------- 33=p ----------MDVFSF-------------------------------------------- 34== MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T 35=p MANFTFGDLALDVARMG-----GLASTPSGLRSTGLTTPGLSPTGLV------------T 36== -MEGAEGQEELDWEAL-------YLRLP--LQNCSWNSTGWEPNWNV------------T 1== E--G--DNFYVP----FSNKTGLARSPYEYPQY-------YLAEPWK---------YSAL 2== E--G--PNFYVP----FSNITGVVRSPFEQPQY-------YLAEPWQ---------FSML 3== E--G--INFYVP----MSNKTGVVRSPFEYPQY-------YLAEPWK---------YRLV 4=p E--G--KNFYVP----MSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKIL 5=p E--G--NNFYVP----LSNRTGLVRSPFEYPQY-------YLAEPWQ---------FKLL 6== PEFH--EDFYIPIPLDINNLS--AYSPFLVPQD-------HLGNQGI---------FMAM 7== S--E--EEFYL-----FKNIS--SVGPWDGPQY-------HIAPVWA---------FYLQ 8=opsin, ------------------------------------------------------------ 9== DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT 10== DSTQ--SSIFT-----YTNSNS-TRGPFEGPNY-------HIAPRWV---------YHLT 11== DTTR--GSVFT-----YTNTNN-TRGPFEGPNY-------HIAPRWV---------YNLV 12== DTTR--DSVFT-----YTNSNN-TRGPFEGPNY-------HIAPRWV---------YNLT 13== NSSQ--AP-----------PNG-TPGPFDGPQW------PYQAPQST---------YVGV 14== ARLS--A----------ETRLLGWNVPPEELR--------HIPEHWLTYPEPPESMNYLL 15== ARLS--A----------ESRLLGWNVPPDELR--------HIPEHWLIYPEPPESMNYLL 16== AR-S--SG---N----GDLQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML 17== ARMS--SG---S----DELQFLGWNVPPDQIQ--------YIPEHWLTQLEPPASMHYML 18== GAAS--MD-FGY----PEGVSIVDFVRPEIKP--------YVHQHWYNYPPVNPMWHYLL 19== GSGA--AT-FGY----PEGMTVADFVPDRVKH--------MVLDHWYNYPPVNPMWHYLL 20== S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL 21== S-----------------NGSVVDKVTPDMAH--------LISPYWNQFPAMDPIWAKIL 22== S-----------------NGSVVDKVTPDMAH--------LISPYWDQFPAMDPIWAKIL 23== SSG---------------NGSVLDNVLPDMAH--------LVNPYWSRFAPMDPMMSKIL 24== TGG---------------NRSVLDNVLPDMAP--------LVNPHWSRFAPMDPTMSKIL 25== SYGG--QARF-------NNQTVVDKVPPDMLH--------LIDANWYQYPPLNPMWHGIL 26== GWPY--QP----------NASVVDTMPKEMLY--------MIHEHWYAFPPMNPLWYSIL 27== TLVN--QT-WWY------NPTVD------------------IHPHWAKFDPIPDAVYYSV 28== LRDN--ET-WWY------NPSIV------------------VHPHWREFDQVPDAVYYSL 29== PVAGSWAPHLLS------EVTASPAPTWDAPPDNASGCGEQIN--------YGRVEKVVI 30== ------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI 31=p ------MPHLLS---GFLEVTASPAPTWDAPPDNVSGCGEQIN--------YGRVEKVVI 32== ---------------GQGNNTTSPPAPFET-GGNTTGISDVT---------VSYQ--VIT 33=p ---------------GQGNNTTASQEPFGT-GGNVTSISDVT---------FSYQ--VIT 34== SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT 35=p SDFN--DSYGLT---GQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVYSHEHLVLT 36== VVPN--TTWW------------QASAPFDTPAALVRAAAK-------------------- 1== AAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-FTVTMYTSM 2== AAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-FTTTLYTSL 3== CCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-FTVTFYTAW 4=p ALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-FTVTFYTAI 5=p AVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-FTVTFYTAI 6== SVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-SPLSFYSFF 7== AAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-VFPVFVASC 8=opsin, ------------------------------------------DLAETVIA-STISIVNQV 9== SVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISVVNQV 10== SVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-STISIVNQV 11== SFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-STISVFNQI 12== SVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-STISVINQI 13== AVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-SSVSLSNNI 14== GTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--TPIFIYNSF 15== GTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--TPIFIYNSF 16== GVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIF--NSF 17== GVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--APIFIYNSF 18== GVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-VPFFTYNCF 19== GVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-FPPFCYNCF 20== TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY 21== TAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY 22== TAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-TPMMGINLY 23== GLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY 24== GLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-SPVMIINFY 25== GFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-SPPMVINCY 26== GVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-MPTMTSNCF 27== GIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGFPLKTISAF 28== GIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF 29== GSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL 30== GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL 31=p GSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-MPFVSVTDL 32== SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV 33=p SLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-LPMAALYQV 34== SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI 35=p SVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-MPLSVVSEI 36== AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-MPLGAVYEV . 1== N-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FRFGNTHAIM 2== H-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FRFGENHAIM 3== N-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FRFSATHAMM 4=p N-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSSHAFA 5=p N-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FKFSSTHASA 6== N-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FTFKTPHAIA 7== N-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FRFSSKHALT 8=opsin, S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV 9== Y-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VRFDAKLAIV 10== S-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VRFDAKLAIV 11== F-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IKFDSKLAII 12== S-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IKFDGKLAVA 13== N-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQFQRRHAVS 14== H-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--KMTHGKAIA 15== H-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--KMTHGKAIA 16== H-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI 17== H-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--NMTFTKAVI 18== SGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PKLTTGKAVV 19== SGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PKLTQGKATF 20== F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG 21== F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG 22== F-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RPMTIPLALG 23== Y-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM 24== Y-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TPMTIKTSIM 25== Y-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KPLSINGALI 26== A-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-APLTHKKATL 27== M-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKKMSHRRAFL 28== L-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFI 29== IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK 30== IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK 31=p IGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVRQNGKCMAK 32== L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA 33=p L-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNKRTPRRAAA 34== S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL 35=p S-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRRRSARRILL 36== V-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHASTAKRVGM : : * : : :*: : : 1== GVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNNESYVVYMF 2== GVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNNESFVIYMF 3== GIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHNESYVLYMF 4=p GIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNNESYVIYMF 5=p GIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNNESYVLYMF 6== GCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNNESYVMFLF 7== VVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLF 8=opsin, GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM 9== GIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM 10== GIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLM 11== GIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGCQSFMLTLM 12== GILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGVQSYMVVLM 13== GCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--NSYILSLF 14== MIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF 15== MIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDTRLFVACIF 16== MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF 17== MNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDTRLFVGTIF 18== FALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNTFSYNIFIF 19== MCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNTITYNICIF 20== KM---------------------------YVPEGNLTSCGIDYLE--RDWNPRSYLIFYS 21== KIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS 22== KIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNPRSYLIFYS 23== KILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNPRSYLITYS 24== KIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNPRSYLITYS 25== RIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLSASYLVCYG 26== LLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSSASYVVIYG 27== MIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPSTRSFILCMY 28== MIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTTRSNILCMF 29== MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST 30== MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST 31=p MILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF----------GYTIYST 32== LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST 33=p LISLTWLIGFLI-SIPPMLG-WRTPEDRSDPD---ACTISKDH----------GYTIYST 34== MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST 35=p MIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK----------GYTIFST 36== MIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV----------GYQIFAT : 1== VVHFLVPFVIIFFCYGRLLCTV----KEAAAAQQ-------------------------- 2== VVHFTIPMIVIFFCYGQLVFTV----KEAAAQQQ-------------------------- 3== VIHFIIPVVVIFFSYGRLICKV----REAAAQQQ-------------------------- 4=p VCHFILPVAVIFFTYGRLVCTV----KAAAAQQQ-------------------------- 5=p ICHFILPVTIIFFTYGRLVCTV----KAAAAQQQ-------------------------- 6== CFCFAVPFGTIVFCYGQLLITL----KLAAKAQA-------------------------- 7== IFCFIVPLSLICFSYTQLLRAL----KAVAAQQQ-------------------------- 8=opsin, VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- 9== VTCCITPLSIIVLCYLQVWLAI----RAVAKQQK-------------------------- 10== VTCCIIPLAIIMLCYLQVWLAI----RAVAKQQK-------------------------- 11== ITCCFLPLFIIIVCYLQVWMAI----RAVAAQQK-------------------------- 12== VTCCFFPLAIIILCYLQVWLAI----RAVAAQQK-------------------------- 13== VTCFVLPLSLILFSYTNLLLTL----RAAAAQQK-------------------------- 14== FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- 15== FFSFVCPTTMITYYYSQIVGHVFSHEKALRDQAKK------------------------- 16== FFSFVCPTLMILYYYSQIVGHVFSHEKALREQAKK------------------------- 17== LFSFVVPTLMILYYYSQIVGHVFNHEKALREQAKK------------------------- 18== VFDYFLPAAIIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- 19== IFDFFLPASVIVFSYVFIVKAIFAHEAAMRAQAKK------------------------- 20== IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- 21== IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- 22== IFVYYIPLFLICYSYWFIIAAVSAHEKAMREQAKK------------------------- 23== LFVYYTPLFLICYSYWFIIAAVAAHEKAMREQAKK------------------------- 24== LFVYYTPLFMICYSYWFIIATVAAHEKAMRDQAKK------------------------- 25== IWVYFVPLFLIIYSYWFIIQAVAAHEKNMREQAKK------------------------- 26== LAVYFLPLITMIYCYFFIVHAVAEHEKQLREQAKK------------------------- 27== FCGFMLPIIIIAFCYFNIVMSVSNHEKEMAAMAKR------------------------- 28== ILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKR------------------------- 29== AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- 30== AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- 31=p AVAFYIPMSVMLFMYYQIY-------KAARKSAAKHKF---------------------- 32== FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- 33=p FGAFYIPLLLMLVLYGRIF-------RAARFRIRK------------------------- 34== VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY 35=p VGAFYLPMLVMMIIYIRIW-------LVARSRIRKDKFQMTKARLKTEETTLVASPKTEY 36== ASSFYVPVLIILILYWRIY-------QTARKRIR-------------------------- * : * : 1== ------------------------------------------------------------ 2== ------------------------------------------------------------ 3== ------------------------------------------------------------ 4=p ------------------------------------------------------------ 5=p ------------------------------------------------------------ 6== ------------------------------------------------------------ 7== ------------------------------------------------------------ 8=opsin, ------------------------------------------------------------ 9== ------------------------------------------------------------ 10== ------------------------------------------------------------ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ------------------------------------------------------------ 14== --------------------------------------------------MN-------- 15== --------------------------------------------------MN-------- 16== --------------------------------------------------MN-------- 17== --------------------------------------------------MN-------- 18== --------------------------------------------------MN-------- 19== --------------------------------------------------MN-------- 20== --------------------------------------------------MN-------- 21== --------------------------------------------------MN-------- 22== --------------------------------------------------MN-------- 23== --------------------------------------------------MN-------- 24== --------------------------------------------------MN-------- 25== --------------------------------------------------MN-------- 26== --------------------------------------------------MN-------- 27== --------------------------------------------------LN-------- 28== --------------------------------------------------LN-------- 29== ---------------------------------PGFPRV----EPDSVIALNG------- 30== ---------------------------------PGFPRV----QPESVISLNG------- 31=p ---------------------------------PGFPRV----QPESVISLNG------- 32== --------------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR-- 33=p --------------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG-- 34== SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- 35=p SVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--- 36== -------------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGIA 1== ------------------------------------------------------------ 2== ------------------------------------------------------------ 3== ------------------------------------------------------------ 4=p ------------------------------------------------------------ 5=p ------------------------------------------------------------ 6== ------------------------------------------------------------ 7== ------------------------------------------------------------ 8=opsin, ------------------------------------------------------------ 9== ------------------------------------------------------------ 10== ------------------------------------------------------------ 11== ------------------------------------------------------------ 12== ------------------------------------------------------------ 13== ------------------------------------------------------------ 14== --VESL------------------------------------------------------ 15== --VDSL------------------------------------------------------ 16== --VESL------------------------------------------------------ 17== --VESL------------------------------------------------------ 18== --VSTL------------------------------------------------------ 19== --VTNL------------------------------------------------------ 20== --VKSL------------------------------------------------------ 21== --VKSL------------------------------------------------------ 22== --VKSL------------------------------------------------------ 23== --VKSL------------------------------------------------------ 24== --VKSL------------------------------------------------------ 25== --VASL------------------------------------------------------ 26== --VASL------------------------------------------------------ 27== --AKEL------------------------------------------------------ 28== --AKEL------------------------------------------------------ 29== --IVKL----------------------QK---------EVEECAN-------------- 30== --VVKL----------------------QK---------EVEECAN-------------- 31=p --VVKL----------------------QK---------EVEECAN-------------- 32== -------NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAG-- 33=p -------DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESG-- 34== -------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- 35=p -------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-- 36== AAVVAVIGRPLPTISETTTTGFTNVSS----NNTSP---EKQSCANGLEADPPTTGYGAV 1== -------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT-H 2== -------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFT-H 3== -------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT-N 4=p -------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVAAWIFF-N 5=p -------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVAAWIFF-N 6== -------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVS-H 7== -------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN-N 8=opsin, -------------ESESTQK------AEKEVTRMVVVMVLAFC----------------- 9== -------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA-N 10== -------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA-N 11== -------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFVSFAAA-N 12== -------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA-N 13== -------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFALVVAT-H 14== ----------RSNVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMSLIGAF-G 15== ----------RSNVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMSLIGAF-G 16== ----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G 17== ----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-G 18== ----------RS-NEADAQR------AEIRIAKTALVNVSLWFICWTPYALISLKGVM-G 19== ----------RS-NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAITIQGLL-G 20== ----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K 21== ----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-K 22== ----------RS-SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVINCMGLF-K 23== ----------RS-SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVICYFGLF-K 24== ----------RS-SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIICYFGLF-K 25== ----------RS-SENQNTS------AECKLAKVALMTISLWFMAWTPYLVINFSGIF-N 26== ----------RANADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIISWAGVF-S 27== ----------R--KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIALLAQF-G 28== ----------R--KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-G 29== ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC 30== ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC 31=p ----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFIC 32== PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C 33=p SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-C 34== -----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V 35=p -----------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-V 36== AAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-C * . : 1== QGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC--------GKNPL 2== QGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC--------GKNPL 3== KGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC--------GKNPF 4=p KGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC--------GKNPL 5=p KGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC--------GKNPL 6== RGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC--------GKN-I 7== RNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC--------GKA-M 8=opsin, ------------------------------------------------------------ 9== PGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V 10== PGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF---------GKK-V 11== PGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF---------GKK-V 12== PGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF---------GKK-V 13== KGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY----QPQR-T 14== DKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL---------N 15== DKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI---------S 16== DKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV---------N 17== DKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV---------N 18== DTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HE-T 19== NAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HE-K 20== F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V 21== F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V 22== F-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GK-V 23== I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GN-T 24== I-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GT-T 25== L-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------A-A 26== SGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GS-G 27== PAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKE-C 28== PLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKE-T 29== GTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- 30== GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYR----NINR-- 31=p GTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR----NINR-- 32== ESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RQ---- 33=p ESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC----RR---- 34== DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- 35=p DPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR----RGHR-- 36== DCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRV----RRRR-- 1== GDDE--SGASTSKTEVSSVS-TSPVSPA-------------------------------- 2== GDDE--ASATASKTE------TSQVAPA-------------------------------- 3== GDEDVSSTVSQSKTEVSSVS-SSQVSPA-------------------------------- 4=p GDDE-SSTVSTSKTEVSS------VSPA-------------------------------- 5=p GDEE-SSTVSTSKTEVSS------VSPA-------------------------------- 6== EEDE--ASTSSQVTQVSS------VAPEK------------------------------- 7== TDES--DTCSSQKTEVSTVS-STQVGPN-------------------------------- 8=opsin, ------------------------------------------------------------ 9== DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- 10== DDGS--ELSSASKTEVSSV---SSVSPA-------------------------------- 11== DDGS--EASTTSRTEVSSVS-NSSVAPA-------------------------------- 12== DDGS--EVST-SRTEVSSVS-NSSVSPA-------------------------------- 13== GKAS--PGTPGPHADVTAAGLRNKVMPAHPV----------------------------- 14== EKAP--ESSAVASTSTTQEP--QQTTAA-------------------------------- 15== EKAP--ESRAAISTSTTQEQ--QQTTAA-------------------------------- 16== EKSG--EISSAQST-TTQEQ--QQTTAA-------------------------------- 17== EKSG--EASSAQST-TTQEQ-TQQTSAA-------------------------------- 18== ETKS--NDDSQSNSTVAQDK-A-------------------------------------- 19== DPND--VEENQSSNTQTQEK-S-------------------------------------- 20== DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- 21== DDGK--SSDAQSQA-TASEA-ESKA----------------------------------- 22== DDGK--SSEAQSQA-TTSEA-ESKA----------------------------------- 23== DEPK--PDAPASDTETTSEA-DSKA----------------------------------- 24== DEPK--PDAPPSDTETTSEA-ESKD----------------------------------- 25== EPSS--DAVSTTSGTTTVTD-NEKSNA--------------------------------- 26== ESGS--DVKSEASATTTMEE-KPKIPEA-------------------------------- 27== EDAN--DAEEEVVASER--G-GESRDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PP 28== EDDK--DAETEIPAGESSDA-APSADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPP 29== ------KLSAAGMHEALKLAERPERPEF------------VLQNADY------------- 30== ------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- 31=p ------KLSAAGMHEALKLAERPERSEF------------VLQNSDH------------- 32== ------------------------------------------------------------ 33=p ------------------------------------------------------------ 34== ------------------------------------------------------------ 35=p ------------------------------------------------------------ 36== ------A---------------PQ------------------------------------ 1== --------------------------------------------------------- 2== --------------------------------------------------------- 3== --------------------------------------------------------- 4=p --------------------------------------------------------- 5=p --------------------------------------------------------- 6== --------------------------------------------------------- 7== --------------------------------------------------------- 8=opsin, --------------------------------------------------------- 9== --------------------------------------------------------- 10== --------------------------------------------------------- 11== --------------------------------------------------------- 12== --------------------------------------------------------- 13== --------------------------------------------------------- 14== --------------------------------------------------------- 15== --------------------------------------------------------- 16== --------------------------------------------------------- 17== --------------------------------------------------------- 18== --------------------------------------------------------- 19== --------------------------------------------------------- 20== --------------------------------------------------------- 21== --------------------------------------------------------- 22== --------------------------------------------------------- 23== --------------------------------------------------------- 24== --------------------------------------------------------- 25== --------------------------------------------------------- 26== --------------------------------------------------------- 27== QGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQGVDNQAYQA 28== QGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQGVDNQAYQA 29== --------------------------------------------CRKKGHDS----- 30== --------------------------------------------CGKKGHDT----- 31=p --------------------------------------------CGKKGHDT----- 32== --------------------------------------------------------- 33=p --------------------------------------------------------- 34== --------------------------------------------------------- 35=p --------------------------------------------------------- 36== ---------------------------------------------------------