view test-data/mafft_fftns_result.aln @ 3:a681631ccee6 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/mafft commit 3dadc4bd6bf2f20b34794c767dfc6d541031914c-dirty

>     1== M63632   1 Lampetra japonica rhodopsin <>[BBRC174,1125-1132'91]
-------------------MNGTE------------------------GDNF--------
YVP----F-SNKTGLARSPY----------------EYPQY-------YLAEPWK-----
----YSALAAYMFFLILVGFPVNFLTLFVTVQHKKLRTPLNYILLNLAMANLFMVLFG-F
TVTMYTSMN-GYFV--FGPTMCSIEGFFATLGGEVALWSLVVLAIERYIVICKPMGN-FR
FGNTHAIMGVAFTWIMALAC-AAPPLVG-W-----SRYIPEGMQCSCGPDYYTLNPNFNN
ESYVVYMFVVHFLVPFVIIFFCYGRLLCTV----KE------------------------
---------------------------------------------------AAAAQQ---
------------------------------------------------------------
--------------ESASTQK------AEKEVTRMVVLMVIGFLVCWVPYASVAFYIFT-
HQGS--DFGATFMTLPAFFAKSSALYNPVIYILMNKQFRNCMITTLCC---------GKN
PLGD-DE--SGASTSKTEVSSVS-TSPV--------------------------------
--------------------------------------------SPA-------------
------
>     2== U22180   1 rat opsin <rod>[J.Mol.Neurosci.5(3),207-209'94]
-------------------MNGTE------------------------GPNF--------
YVP----F-SNITGVVRSPF----------------EQPQY-------YLAEPWQ-----
----FSMLAAYMFLLIVLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGG-F
TTTLYTSLH-GYFV--FGPTGCNLEGFFATLGGEIGLWSLVVLAIERYVVVCKPMSN-FR
FGENHAIMGVAFTWVMALAC-AAPPLVG-W-----SRYIPEGMQCSCGIDYYTLKPEVNN
ESFVIYMFVVHFTIPMIVIFFCYGQLVFTV----KE------------------------
---------------------------------------------------AAAQQQ---
------------------------------------------------------------
--------------ESATTQK------AEKEVTRMVIIMVIFFLICWLPYASVAMYIFT-
HQGS--NFGPIFMTLPAFFAKTASIYNPIIYIMMNKQFRNCMLTSLCC---------GKN
PLGD-DE--ASATASKTE------TSQV--------------------------------
--------------------------------------------APA-------------
------
>     3== M92038   1 chicken green sensitive cone opsin <retina>[PNAS89,5932-5936'9
-------------------MNGTE------------------------GINF--------
YVP----M-SNKTGVVRSPF----------------EYPQY-------YLAEPWK-----
----YRLVCCYIFFLISTGLPINLLTLLVTFKHKKLRQPLNYILVNLAVADLFMACFG-F
TVTFYTAWN-GYFV--FGPVGCAVEGFFATLGGQVALWSLVVLAIERYIVVCKPMGN-FR
FSATHAMMGIAFTWVMAFSC-AAPPLFG-W-----SRYMPEGMQCSCGPDYYTHNPDYHN
ESYVLYMFVIHFIIPVVVIFFSYGRLICKV----RE------------------------
---------------------------------------------------AAAQQQ---
------------------------------------------------------------
--------------ESATTQK------AEKEVTRMVILMVLGFMLAWTPYAVVAFWIFT-
NKGA--DFTATLMAVPAFFSKSSSLYNPIIYVLMNKQFRNCMITTICC---------GKN
PFGD-EDVSSTVSQSKTEVSSVS-SSQV--------------------------------
--------------------------------------------SPA-------------
------
>     4=p A45229 opsin, green-sensitive (clone GFgr-1) - goldfish
-------------------MNGTE------------------------GKNF--------
YVP----M-SNRTGLVRSPF----------------EYPQY-------YLAEPWQ-----
----FKILALYLFFLMSMGLPINGLTLVVTAQHKKLRQPLNFILVNLAVAGTIMVCFG-F
TVTFYTAIN-GYFV--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FK
FSSSHAFAGIAFTWVMALAC-AAPPLFG-W-----SRYIPEGMQCSCGPDYYTLNPDYNN
ESYVIYMFVCHFILPVAVIFFTYGRLVCTV----KA------------------------
---------------------------------------------------AAAQQQ---
------------------------------------------------------------
--------------DSASTQK------AEREVTKMVILMVFGFLIAWTPYATVAAWIFF-
NKGA--DFSAKFMAIPAFFSKSSALYNPVIYVLLNKQFRNCMLTTIFC---------GKN
PLGD-DE-SSTVSTSKTEVSS------V--------------------------------
--------------------------------------------SPA-------------
------
>     5=p B45229 opsin, green-sensitive (clone GFgr-2) - goldfish
-------------------MNGTE------------------------GNNF--------
YVP----L-SNRTGLVRSPF----------------EYPQY-------YLAEPWQ-----
----FKLLAVYMFFLICLGLPINGLTLICTAQHKKLRQPLNFILVNLAVAGAIMVCFG-F
TVTFYTAIN-GYFA--LGPTGCAVEGFMATLGGEVALWSLVVLAIERYIVVCKPMGS-FK
FSSTHASAGIAFTWVMAMAC-AAPPLVG-W-----SRYIPEGIQCSCGPDYYTLNPEYNN
ESYVLYMFICHFILPVTIIFFTYGRLVCTV----KA------------------------
---------------------------------------------------AAAQQQ---
------------------------------------------------------------
--------------DSASTQK------AEREVTKMVILMVLGFLVAWTPYATVAAWIFF-
NKGA--AFSAQFMAIPAFFSKTSALYNPVIYVLLNKQFRSCMLTTLFC---------GKN
PLGD-EE-SSTVSTSKTEVSS------V--------------------------------
--------------------------------------------SPA-------------
------
>     6== L11864   1 Carassius auratus blue cone opsin <retina>[Biochemistry32,208-
-------------------MKQVPEF----------------------HEDF--------
YIPIPLDI-NNLS--AYSPF----------------LVPQD-------HLGNQGI-----
----FMAMSVFMFFIFIGGASINILTILCTIQFKKLRSHLNYILVNLSIANLFVAIFG-S
PLSFYSFFN-RYFI--FGATACKIEGFLATLGGMVGLWSLAVVAFERWLVICKPLGN-FT
FKTPHAIAGCILPWISALAA-SLPPLFG-W-----SRYIPEGLQCSCGPDWYTTNNKYNN
ESYVMFLFCFCFAVPFGTIVFCYGQLLITL----KL------------------------
---------------------------------------------------AAKAQA---
------------------------------------------------------------
--------------DSASTQK------AEREVTKMVVVMVLGFLVCWAPYASFSLWIVS-
HRGE--EFDLRMATIPSCLSKASTVYNPVIYVLMNKQFRSCMM-KMVC---------GKN
-IEE-DE--ASTSSQVTQVSS------V--------------------------------
--------------------------------------------APEK------------
------
>     7== M13299   1 human BCP <>[Science232(4747),193-202'86]
-------------------MRKMS------------------------EEEF--------
YL-----F-KNIS--SVGPW----------------DGPQY-------HIAPVWA-----
----FYLQAAFMGTVFLIGFPLNAMVLVATLRYKKLRQPLNYILVNVSFGGFLLCIFS-V
FPVFVASCN-GYFV--FGRHVCALEGFLGTVAGLVTGWSLAFLAFERYIVICKPFGN-FR
FSSKHALTVVLATWTIGIGV-SIPPFFG-W-----SRFIPEGLQCSCGPDWYTVGTKYRS
ESYTWFLFIFCFIVPLSLICFSYTQLLRAL----KA------------------------
---------------------------------------------------VAAQQQ---
------------------------------------------------------------
--------------ESATTQK------AEREVSRMVVVMVGSFCVCYVPYAAFAMYMVN-
NRNH--GLDLRLVTIPSFFSKSACIYNPIIYCFMNKQFQACIM-KMVC---------GKA
-MTD-ES--DTCSSQKTEVSTVS-STQV--------------------------------
--------------------------------------------GPN-------------
------
>     8=opsin, greensensitive  human (fragment) S07060
------------------------------------------------------------
------------------------------------------------------------
--------------------------------------------------DLAETVIA-S
TISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VR
FDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGV
QSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA------------------------
---------------------------------------------------VAKQQK---
------------------------------------------------------------
--------------ESESTQK------AEKEVTRMVVVMVLAFC----------------
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
------
>     9== K03494   1 human GCP <>[Science232(4747),193-202'86]
-------------------MAQQWSL----------QRLAGRHPQDSYEDST--------
QSSI-FTY-TNSNS-TRGPF----------------EGPNY-------HIAPRWV-----
----YHLTSVWMIFVVIASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-S
TISVVNQVY-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWMVVCKPFGN-VR
FDAKLAIVGIAFSWIWAAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGV
QSYMIVLMVTCCITPLSIIVLCYLQVWLAI----RA------------------------
---------------------------------------------------VAKQQK---
------------------------------------------------------------
--------------ESESTQK------AEKEVTRMVVVMVLAFCFCWGPYAFFACFAAA-
NPGY--PFHPLMAALPAFFAKSATIYNPVIYVFMNRQFRNCIL-QLF----------GKK
-VDD-GS--ELSSASKTEVSSV---SSV--------------------------------
--------------------------------------------SPA-------------
------
>    10== Z68193   1 human Red Opsin <>[]
-------------------MAQQWSL----------QRLAGRHPQDSYEDST--------
QSSI-FTY-TNSNS-TRGPF----------------EGPNY-------HIAPRWV-----
----YHLTSVWMIFVVTASVFTNGLVLAATMKFKKLRHPLNWILVNLAVADLAETVIA-S
TISIVNQVS-GYFV--LGHPMCVLEGYTVSLCGITGLWSLAIISWERWLVVCKPFGN-VR
FDAKLAIVGIAFSWIWSAVW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSYPGV
QSYMIVLMVTCCIIPLAIIMLCYLQVWLAI----RA------------------------
---------------------------------------------------VAKQQK---
------------------------------------------------------------
--------------ESESTQK------AEKEVTRMVVVMIFAYCVCWGPYTFFACFAAA-
NPGY--AFHPLMAALPAYFAKSATIYNPVIYVFMNRQFRNCIL-QLF----------GKK
-VDD-GS--ELSSASKTEVSSV---SSV--------------------------------
--------------------------------------------SPA-------------
------
>    11== M92036   1 Gecko gecko P521 <retina>[PNAS89,6841-6845'92]
-------------------MTEAWNV----------AVFAARRSRDD-DDTT--------
RGSV-FTY-TNTNN-TRGPF----------------EGPNY-------HIAPRWV-----
----YNLVSFFMIIVVIASCFTNGLVLVATAKFKKLRHPLNWILVNLAFVDLVETLVA-S
TISVFNQIF-GYFI--LGHPLCVIEGYVVSSCGITGLWSLAIISWERWFVVCKPFGN-IK
FDSKLAIIGIVFSWVWAWGW-SAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSVELGC
QSFMLTLMITCCFLPLFIIIVCYLQVWMAI----RA------------------------
---------------------------------------------------VAAQQK---
------------------------------------------------------------
--------------ESESTQK------AEREVSRMVVVMIVAFCICWGPYASFVSFAAA-
NPGY--AFHPLAAALPAYFAKSATIYNPVIYVFMNRQFRNCIM-QLF----------GKK
-VDD-GS--EASTTSRTEVSSVS-NSSV--------------------------------
--------------------------------------------APA-------------
------
>    12== M62903   1 chicken visual pigment <>[BBRC173,1212-1217'90]
-------------------MA-AWEA----------AFAARRRHEE--EDTT--------
RDSV-FTY-TNSNN-TRGPF----------------EGPNY-------HIAPRWV-----
----YNLTSVWMIFVVAASVFTNGLVLVATWKFKKLRHPLNWILVNLAVADLGETVIA-S
TISVINQIS-GYFI--LGHPMCVVEGYTVSACGITALWSLAIISWERWFVVCKPFGN-IK
FDGKLAVAGILFSWLWSCAW-TAPPIFG-W-----SRYWPHGLKTSCGPDVFSGSSDPGV
QSYMVVLMVTCCFFPLAIIILCYLQVWLAI----RA------------------------
---------------------------------------------------VAAQQK---
------------------------------------------------------------
--------------ESESTQK------AEKEVSRMVVVMIVAYCFCWGPYTFFACFAAA-
NPGY--AFHPLAAALPAYFAKSATIYNPIIYVFMNRQFRNCIL-QLF----------GKK
-VDD-GS--EVST-SRTEVSSVS-NSSV--------------------------------
--------------------------------------------SPA-------------
------
>    13== S75720   1 chicken P-opsin <>[Science267(5203),1502-1506'95]
-------------------MS---------------------------SNSS--------
QAP--------PNG-TPGPF----------------DGPQW------PYQAPQST-----
----YVGVAVLMGTVVACASVVNGLVIVVSICYKKLRSPLNYILVNLAVADLLVTLCG-S
SVSLSNNIN-GFFV--FGRRMCELEGFMVSLTGIVGLWSLAILALERYVVVCKPLGD-FQ
FQRRHAVSGCAFTWGWALLW-SAPPLLG-W-----SSYVPEGLRTSCGPNWYTGGSNN--
NSYILSLFVTCFVLPLSLILFSYTNLLLTL----RA------------------------
---------------------------------------------------AAAQQK---
------------------------------------------------------------
--------------EADTTQR------AEREVTRMVIVMVMAFLLCWLPYSTFALVVAT-
HKGI--IIQPVLASLPSYFSKTATVYNPIIYVFMNKQFQSCLL-EMLCCGY-----QPQR
-TGK-AS--PGTPGPHADVTAAGLRNKV--------------------------------
--------------------------------------------MPAHP---V-------
------
>    14== M17718   1 D.melanogaster Rh3 <>[J.Neurosci.7,1550-1557'87]
----------MESGNVSSSLFGNVST----------ALRPEARL----SA----------
-ETRLLGW--------NVPP----------------EELR--------HIPEHWLTYPEP
PESMNYLLGTLYIFFTLMSMLGNGLVIWVFSAAKSLRTPSNILVINLAFCDFMMMVK--T
PIFIYNSFH-QGYA--LGHLGCQIFGIIGSYTGIAAGATNAFIAYDRFNVITRPMEG--K
MTHGKAIAMIIFIYMYATPW-VVACYTETW-----GRFVPEGYLTSCTFDYLT--DNFDT
RLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA------------------------
---------------------------------------------------LRDQAKKM-
--------------------------------NVESL-----------------------
-----------RSNVDKNKET------AEIRIAKAAITICFLFFCSWTPYGVMSLIGAF-
GDKT--LLTPGATMIPACACKMVACIDPFVYAISHPRYRMELQKRCPWLAL--------N
EKAP-ES-SAVASTSTTQEP-QQ-TTAA--------------------------------
------------------------------------------------------------
------
>    15== X65879   1 Drosophila pseudoobscura Dpse\Rh3 <>[Genetics132(1),193-204'92
----------MEYHNVSSVL-GNVSS----------VLRPDARL----SA----------
-ESRLLGW--------NVPP----------------DELR--------HIPEHWLIYPEP
PESMNYLLGTLYIFFTVISMIGNGLVMWVFSAAKSLRTPSNILVINLAFCDFMMMIK--T
PIFIYNSFH-QGYA--LGHLGCQIFGVIGSYTGIAAGATNAFIAYDRYNVITRPMEG--K
MTHGKAIAMIIFIYLYATPW-VVACYTESW-----GRFVPEGYLTSCTFDYLT--DNFDT
RLFVACIFFFSFVCPTTMITYYYSQIVGHVFSHEKA------------------------
---------------------------------------------------LRDQAKKM-
--------------------------------NVDSL-----------------------
-----------RSNVDKSKEA------AEIRIAKAAITICFLFFASWTPYGVMSLIGAF-
GDKT--LLTPGATMIPACTCKMVACIDPFVYAISHPRYRMELQKRCPWLAI--------S
EKAP-ES-RAAISTSTTQEQ-QQ-TTAA--------------------------------
------------------------------------------------------------
------
>    16== M17730   1 D.melanogaster Rh4 opsin <>[J.Neurosci.7,1558-1566'87]
----------ME------PLCNASEP----------PLRPEAR-----SSGN--------
GDLQFLGW--------NVPP----------------DQIQ--------YIPEHWLTQLEP
PASMHYMLGVFYIFLFCASTVGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--A
PIF--NSFH-RGFAIYLGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--N
MTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDT
RLFVGTIFFFSFVCPTLMILYYYSQIVGHVFSHEKA------------------------
---------------------------------------------------LREQAKKM-
--------------------------------NVESL-----------------------
-----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-
GDKS--LLTQGATMIPACTCKLVACIDPFVYAISHPRYRLELQKRCPWLGV--------N
EKSG-EI-SSAQST-TTQEQ-QQ-TTAA--------------------------------
------------------------------------------------------------
------
>    17== X65880   1 Drosophila pseudoobscura Dpse\Rh4 <>[Genetics132(1),193-204'92
----------MD------ALCNASEP----------PLRPEARM----SSGS--------
DELQFLGW--------NVPP----------------DQIQ--------YIPEHWLTQLEP
PASMHYMLGVFYIFLFFASTLGNGMVIWIFSTSKSLRTPSNMFVLNLAVFDLIMCLK--A
PIFIYNSFH-RGFA--LGNTWCQIFASIGSYSGIGAGMTNAAIGYDRYNVITKPMNR--N
MTFTKAVIMNIIIWLYCTPW-VVLPLTQFW-----DRFVPEGYLTSCSFDYLS--DNFDT
RLFVGTIFLFSFVVPTLMILYYYSQIVGHVFNHEKA------------------------
---------------------------------------------------LREQAKKM-
--------------------------------NVESL-----------------------
-----------RSNVDKSKET------AEIRIAKAAITICFLFFVSWTPYGVMSLIGAF-
GDKS--LLTPGATMIPACTCKLVACIEPFVYAISHPRYRMELQKRCPWLGV--------N
EKSG-EA-SSAQST-TTQEQTQQ-TSAA--------------------------------
------------------------------------------------------------
------
>    18== D50584   1 Hemigrapsus sanguineus opsin BcRh2 <compound eye>[J.Exp.Biol.1
-------------------MTNATGP----------QMAYYGAA----SMD---------
-----FGYPEGVSIVDFVRP----------------EIKP--------YVHQHWYNYPPV
NPMWHYLLGVIYLFLGTVSIFGNGLVIYLFNKSAALRTPANILVVNLALSDLIMLTTN-V
PFFTYNCFSGGVWM--FSPQYCEIYACLGAITGVCSIWLLCMISFDRYNIICNGFNG-PK
LTTGKAVVFALISWVIAIGC-ALPPFFG-W-----GNYILEGILDSCSYDYLT--QDFNT
FSYNIFIFVFDYFLPAAIIVFSYVFIVKAIFAHEAA------------------------
---------------------------------------------------MRAQAKKM-
--------------------------------NVSTL-----------------------
-----------RS-NEADAQR------AEIRIAKTALVNVSLWFICWTPYALISLKGVM-
GDTS--GITPLVSTLPALLAKSCSCYNPFVYAISHPKYRLAITQHLPWFCV------HET
ETKS-ND-DSQSNSTVAQDKA---------------------------------------
------------------------------------------------------------
------
>    19== D50583   1 Hemigrapsus sanguineus opsin BcRh1 <compound eye>[J.Exp.Biol.1
-------------------MANVTGP----------QMAFYGSG----AAT---------
-----FGYPEGMTVADFVPD----------------RVKH--------MVLDHWYNYPPV
NPMWHYLLGVVYLFLGVISIAGNGLVIYLYMKSQALKTPANMLIVNLALSDLIMLTTN-F
PPFCYNCFSGGRWM--FSGTYCEIYAALGAITGVCSIWTLCMISFDRYNIICNGFNG-PK
LTQGKATFMCGLAWVISVGW-SLPPFFG-W-----GSYTLEGILDSCSYDYFT--RDMNT
ITYNICIFIFDFFLPASVIVFSYVFIVKAIFAHEAA------------------------
---------------------------------------------------MRAQAKKM-
--------------------------------NVTNL-----------------------
-----------RS-NEAETQR------AEIRIAKTALVNVSLWFICWTPYAAITIQGLL-
GNAE--GITPLLTTLPALLAKSCSCYNPFVYAISHPKFRLAITQHLPWFCV------HEK
DPND-VE-ENQSSNTQTQEKS---------------------------------------
------------------------------------------------------------
------
>    20== K02320   1 D.melanogaster opsin <>[Cell40,851-858'85]
----------ME---SFAVAAAQLGP----------HFAPLS------------------
----------NGSVVDKVTP----------------DMAH--------LISPYWNQFPAM
DPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-T
PMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RP
MTIPLALGKM---------------------------YVPEGNLTSCGIDYLE--RDWNP
RSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA------------------------
---------------------------------------------------MREQAKKM-
--------------------------------NVKSL-----------------------
-----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-
KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKV
DDGK-SS-DAQSQATASEAESKA-------------------------------------
------------------------------------------------------------
------
>    21== K02315   1 D.melanogaster ninaE <>[Cell40,839-850'85]
----------ME---SFAVAAAQLGP----------HFAPLS------------------
----------NGSVVDKVTP----------------DMAH--------LISPYWNQFPAM
DPIWAKILTAYMIMIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-T
PMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RP
MTIPLALGKIAYIWFMSSIW-CLAPAFG-W-----SRYVPEGNLTSCGIDYLE--RDWNP
RSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA------------------------
---------------------------------------------------MREQAKKM-
--------------------------------NVKSL-----------------------
-----------RS-SEDAEKS------AEGKLAKVALVTITLWFMAWTPYLVINCMGLF-
KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKV
DDGK-SS-DAQSQATASEAESKA-------------------------------------
------------------------------------------------------------
------
>    22== X65877   1 Drosophila pseudoobscura Dpse\ninaE <>[Genetics132(1),193-204'
----------MD---SFAAVATQLGP----------QFAAPS------------------
----------NGSVVDKVTP----------------DMAH--------LISPYWDQFPAM
DPIWAKILTAYMIIIGMISWCGNGVVIYIFATTKSLRTPANLLVINLAISDFGIMITN-T
PMMGINLYF-ETWV--LGPMMCDIYAGLGSAFGCSSIWSMCMISLDRYQVIVKGMAG-RP
MTIPLALGKIAYIWFMSTIWCCLAPVFG-W-----SRYVPEGNLTSCGIDYLE--RDWNP
RSYLIFYSIFVYYIPLFLICYSYWFIIAAVSAHEKA------------------------
---------------------------------------------------MREQAKKM-
--------------------------------NVKSL-----------------------
-----------RS-SEDADKS------AEGKLAKVALVTISLWFMAWTPYLVINCMGLF-
KF-E--GLTPLNTIWGACFAKSAACYNPIVYGISHPKYRLALKEKCPCCVF------GKV
DDGK-SS-EAQSQATTSEAESKA-------------------------------------
------------------------------------------------------------
------
>    23== M12896   1 D.melanogaster Rh2 <>[Cell44,705-710'86]
-----MERSHLP---ETPFDLAHSGP----------RFQAQSSG----------------
----------NGSVLDNVLP----------------DMAH--------LVNPYWSRFAPM
DPMMSKILGLFTLAIMIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-S
PVMIINFYY-ETWV--LGPLWCDIYAGCGSLFGCVSIWSMCMIAFDRYNVIVKGING-TP
MTIKTSIMKILFIWMMAVFW-TVMPLIG-W-----SAYVPEGNLTACSIDYMT--RMWNP
RSYLITYSLFVYYTPLFLICYSYWFIIAAVAAHEKA------------------------
---------------------------------------------------MREQAKKM-
--------------------------------NVKSL-----------------------
-----------RS-SEDCDKS------AEGKLAKVALTTISLWFMAWTPYLVICYFGLF-
KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPKYRIVLKEKCPMCVF------GNT
DEPKPDA-PASDTETTSEADSKA-------------------------------------
------------------------------------------------------------
------
>    24== X65878   1 Drosophila pseudoobscura Dpse\Rh2 <>[Genetics132(1),193-204'92
-----MERSLLP---EPPLAMALLGP----------RFEAQTGG----------------
----------NRSVLDNVLP----------------DMAP--------LVNPHWSRFAPM
DPTMSKILGLFTLVILIISCCGNGVVVYIFGGTKSLRTPANLLVLNLAFSDFCMMASQ-S
PVMIINFYY-ETWV--LGPLWCDIYAACGSLFGCVSIWSMCMIAFDRYNVIVKGING-TP
MTIKTSIMKIAFIWMMAVFW-TIMPLIG-W-----SSYVPEGNLTACSIDYMT--RQWNP
RSYLITYSLFVYYTPLFMICYSYWFIIATVAAHEKA------------------------
---------------------------------------------------MRDQAKKM-
--------------------------------NVKSL-----------------------
-----------RS-SEDCDKS------AENKLAKVALTTISLWFMAWTPYLIICYFGLF-
KI-D--GLTPLTTIWGATFAKTSAVYNPIVYGISHPNDRLVLKEKCPMCVC------GTT
DEPKPDA-PPSDTETTSEAESKD-------------------------------------
------------------------------------------------------------
------
>    25== U26026   1 Apis mellifera long-wavelength rhodopsin <>[]
-------------------MIAVSGP----------SYEAFSYG----GQA---------
----RF---NNQTVVDKVPP----------------DMLH--------LIDANWYQYPPL
NPMWHGILGFVIGMLGFVSAMGNGMVVYIFLSTKSLRTPSNLFVINLAISNFLMMFCM-S
PPMVINCYY-ETWV--LGPLFCQIYAMLGSLFGCGSIWTMTMIAFDRYNVIVKGLSG-KP
LSINGALIRIIAIWLFSLGW-TIAPMFG-W-----NRYVPEGNMTACGTDYFN--RGLLS
ASYLVCYGIWVYFVPLFLIIYSYWFIIQAVAAHEKN------------------------
---------------------------------------------------MREQAKKM-
--------------------------------NVASL-----------------------
-----------RS-SENQNTS------AECKLAKVALMTISLWFMAWTPYLVINFSGIF-
NL-V--KISPLFTIWGSLFAKANAVYNPIVYGISHPKYRAALFAKFPSLAC-------AA
EPSS-DA-VSTTSGTTTVTDNEK-SNA---------------------------------
------------------------------------------------------------
------
>    26== L03781   1 Limulus polyphemus opsin <>[PNAS90,6150-6154'93]
---------------------MANQL----------SYSSLGWP----YQP---------
----------NASVVDTMPK----------------EMLY--------MIHEHWYAFPPM
NPLWYSILGVAMIILGIICVLGNGMVIYLMMTTKSLRTPTNLLVVNLAFSDFCMMAFM-M
PTMTSNCFA-ETWI--LGPFMCEVYGMAGSLFGCASIWSMVMITLDRYNVIVRGMAA-AP
LTHKKATLLLLFVWIWSGGW-TILPFFG-W-----SRYVPEGNLTSCTVDYLT--KDWSS
ASYVVIYGLAVYFLPLITMIYCYFFIVHAVAEHEKQ------------------------
---------------------------------------------------LREQAKKM-
--------------------------------NVASL-----------------------
-----------RANADQQKQS------AECRLAKVAMMTVGLWFMAWTPYLIISWAGVF-
SSGT--RLTPLATIWGSVFAKANSCYNPIVYGISHPRYKAALYQRFPSLAC------GSG
ESGS-DV-KSEASATTTMEEKPK-IPEA--------------------------------
------------------------------------------------------------
------
>    27== X07797   1 Octopus dofleini rhodopsin <>[FEBS232(1),69-72'88]
------------------------------------MVESTTLV----NQT---------
-----WWY--NPTVD----------------------------------IHPHWAKFDPI
PDAVYYSVGIFIGVVGIIGILGNGVVIYLFSKTKSLQTPANMFIINLAMSDLSFSAINGF
PLKTISAFM-KKWI--FGKVACQLYGLLGGIFGFMSINTMAMISIDRYNVIGRPMAASKK
MSHRRAFLMIIFVWMWSIVW-SVGPVFN-W-----GAYVPEGILTSCSFDYLS--TDPST
RSFILCMYFCGFMLPIIIIAFCYFNIVMSVSNHEKE------------------------
---------------------------------------------------MAAMAKRL-
--------------------------------NAKEL-----------------------
-----------R--KAQAGAS------AEMKLAKISMVIITQFMLSWSPYAIIALLAQF-
GPAE--WVTPYAAELPVLFAKASAIHNPIVYSVSHPKFREAIQTTFPWLLTCCQFDEKEC
EDAN-DA-EEEVVASER--GGES-RDAAQMKEMMAMMQKMQAQQAAYQPPPPPQGY--PP
QGYPPQGAYPPPQGYPPQGYPPQGYPPQGYPPQGAPPQVEAPQGAPPQG---VDNQAYQA
------
>    28== X70498   1 Todarodes pacificus rhodopsin <retina>[FEBS317(1-2),5-11'93]
-------------------------------------MGRDLRD----NET---------
-----WWY--NPSIV----------------------------------VHPHWREFDQV
PDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGF
PLMTISCFL-KKWI--FGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKK
MSHRRAFIMIIFVWLWSVLW-AIGPIFG-W-----GAYTLEGVLCNCSFDYIS--RDSTT
RSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKE------------------------
---------------------------------------------------MAAMAKRL-
--------------------------------NAKEL-----------------------
-----------R--KAQAGAN------AEMRLAKISIVIVSQFLLSWSPYAVVALLAQF-
GPLE--WVTPYAAQLPVMFAKASAIHNPMIYSVSHPKFREAISQTFPWVLTCCQFDDKET
EDDK-DA-ETEIPAGESSDAAPS-ADAAQMKEMMAMMQKMQQQQAAY----PPQGYAPPP
QGYPPQGY--PPQGYPPQGYPPQGYPP---PPQGAPPQ-GAPPAAPPQG---VDNQAYQA
------
>    29== L21195   1 human serotonin 5-HT7 receptor protein <placenta and fetal bra
---------MMD-------VNSSGRPDLYGHLRSF-LLPEVGRGLPDLSPDGGADPVAGS
WAPHLLS---EVTASPAPTW----------------DAPPDNASGCGEQIN--------Y
GRVEKVVIGSILTLITLLTIAGNCLVVISVCFVKKLRQPSNYLIVSLALADLSVAVAV-M
PFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVR
QNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF---------
-GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF---------------------
----------------------------------P--------GFPR----VEPDS----
---VIAL-----------------NGIVKLQ--------KEVEECAN-------------
-----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFI
CGTSCSCIPLWVERTFLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR---------
-----NINRKLSAAGMHEALKLA-------------------------------------
-------------------------------------------ERPERPEFVLQNADYCR
KKGHDS
>    30== L15228   1 rat 5HT-7 serotonin receptor <>[JBC268,18200-18204'93]
------------------------------------------------------------
-MPHLLSGFLEVTASPAPTW----------------DAPPDNVSGCGEQIN--------Y
GRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-M
PFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVR
QNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF---------
-GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF---------------------
----------------------------------P--------GFPR----VQPES----
---VISL-----------------NGVVKLQ--------KEVEECAN-------------
-----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFI
CGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRPTSRSLLQCQYR---------
-----NINRKLSAAGMHEALKLA-------------------------------------
-------------------------------------------ERPERSEFVLQNSDHCG
KKGHDT
>    31=p A47425 serotonin receptor 5HT-7 - rat
------------------------------------------------------------
-MPHLLSGFLEVTASPAPTW----------------DAPPDNVSGCGEQIN--------Y
GRVEKVVIGSILTLITLLTIAGNCLVVISVSFVKKLRQPSNYLIVSLALADLSVAVAV-M
PFVSVTDLIGGKWI--FGHFFCNVFIAMDVMCCTASIMTLCVISIDRYLGITRPLTYPVR
QNGKCMAKMILSVWLLSASI-TLPPLFG-W-----AQNVNDDKVCLISQDF---------
-GYTIYSTAVAFYIPMSVMLFMYYQIYKAARKSAAKHKF---------------------
----------------------------------P--------GFPR----VQPES----
---VISL-----------------NGVVKLQ--------KEVEECAN-------------
-----LSRLLKHERKNISIFK------REQKAATTLGIIVGAFTVCWLPFFLLSTARPFI
CGTSCSCIPLWVERTCLWLGYANSLINPFIYAFFNRDLRTTYRSLLQCQYR---------
-----NINRKLSAAGMHEALKLA-------------------------------------
-------------------------------------------ERPERSEFVLQNSDHCG
KKGHDT
>    32== M83181   1 human serotonin receptor <>[JBC267(11),7553-7562'92]
----------MD-------VLSPG------------QGNNTTSPPAPFETGG--------
----------NTTGISDVTV----------------------------------------
--SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-L
PMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNK
RTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKDH---------
-GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK------------------------
---------------TVKKVEKTGADTRHGASPAPQPKKS-----------VNGESGSR-
--------NWRLGVESKAGGALCANGAVRQGDDGAALEVIEVHRVGNSKEHLPLPSEAG-
-PTPCAPASFERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-
CESSC-HMPTLLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC---------
-----RQ-----------------------------------------------------
------------------------------------------------------------
------
>    33=p A35181 serotonin receptor class 1A - rat
----------MD-------VFSFG------------QGNNTTASQEPFGTGG--------
----------NVTSISDVTF----------------------------------------
--SYQVITSLLLGTLIFCAVLGNACVVAAIALERSLQNVANYLIGSLAVTDLMVSVLV-L
PMAALYQVL-NKWT--LGQVTCDLFIALDVLCCTSSILHLCAIALDRYWAITDPIDYVNK
RTPRRAAALISLTWLIGFLI-SIPPMLG-WRTPEDRSDPDA---CTISKDH---------
-GYTIYSTFGAFYIPLLLMLVLYGRIFRAARFRIRK------------------------
---------------TVRKVEKKGAGTSLGTSSAPPPKKS-----------LNGQPGSG-
--------DWRRCAENRAVGTPCTNGAVRQGDDEATLEVIEVHRVGNSKEHLPLPSESG-
-SNSYAPACLERKNERNAEAKRKMALARERKTVKTLGIIMGTFILCWLPFFIVALVLPF-
CESSC-HMPALLGAIINWLGYSNSLLNPVIYAYFNKDFQNAFKKIIKCKFC---------
-----RR-----------------------------------------------------
------------------------------------------------------------
------
>    34== L06803   1 Lymnaea stagnalis serotonin receptor <>[PNAS90,11-15'93]
MANFTFGDLALD-------VARMG-----GLASTPSGLRSTGLTTPGLSPTG--------
----------LVTSDFNDSYGLTGQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVY
SHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-M
PLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRR
RSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK---------
-GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTE
YSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--
--------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-
------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-
VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR---------
-----RGHR---------------------------------------------------
------------------------------------------------------------
------
>    35=p A47174 serotonin receptor, 5HTlym receptor - great pond snail
MANFTFGDLALD-------VARMG-----GLASTPSGLRSTGLTTPGLSPTG--------
----------LVTSDFNDSYGLTGQFINGSHSSRSRDNASANDTSATNMTDDRYWSLTVY
SHEHLVLTSVILGLFVLCCIIGNCFVIAAVMLERSLHNVANYLILSLAVADLMVAVLV-M
PLSVVSEIS-KVWF--LHSEVCDMWISVDVLCCTASILHLVAIAMDRYWAVTS-IDYIRR
RSARRILLMIMVVWIVALFI-SIPPLFG-WRDP--NNDPDKTGTCIISQDK---------
-GYTIFSTVGAFYLPMLVMMIIYIRIWLVARSRIRKDKFQMTKARLKTEETTLVASPKTE
YSVVSDCNGCNSPDSTTEKKKRRAPFKSYGCSPRPERKKNRAKKLPENANGVNSNSSS--
--------SERLKQIQIETAEAFANGCA----EEASIAMLERQ-CNNGKKISSNDTPYS-
------------RTREKLELK------RERKAARTLAIITGAFLICWLPFFIIALIGPF-
VDPE--GIPPFARSFVLWLGYFNSLLNPIIYTIFSPEFRSAFQKILFGKYR---------
-----RGHR---------------------------------------------------
------------------------------------------------------------
------
>    36== X95604   1 Bombyx mori serotonin receptor <antennae>[InsectBiochem.Mol.Bi
-MEGAEGQEELD-------WEAL-------YLRLP--LQNCSWNSTGWEPNW--------
----------NVTVVPNTTW---------WQASAPFDTPAALVRAAAK------------
--------AVVLGLLILATVVGNVFVIAAILLERHLRSAANNLILSLAVADLLVACLV-M
PLGAVYEVV-QRWT--LGPELCDMWTSGDVLCCTASILHLVAIALDRYWAVTN-IDYIHA
STAKRVGMMIACVWTVSFFV-CIAQLLG-WKDPDWNQRVSEDLRCVVSQDV---------
-GYQIFATASSFYVPVLIILILYWRIYQTARKRIR-------------------------
--------------------RRRGATARGGVGPPP---------VPAGGALVAGGGSGGI
AAAVVAVIGRPLPTISETTTTGFTNVSS----NNTS---PEKQSCANGLEADPPTTGYGA
VAAAYYPSLVRRKPKEAADSK------RERKAAKTLAIITGAFVACWLPFFVLAILVPT-
CDCE---VSPVLTSLSLWLGYFNSTLNPVIYTVFSPEFRHAFQRLLCGRRV---------
-----RRRRA--------------------------------------------------
---------------------------------------------PQ-------------
------