Mercurial > repos > rnateam > methylkit
view test-data/input_control2.myCpG.txt @ 0:a8705df7c57f draft default tip
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/methylkit commit 14f0b39f64982773ef0367379b915f742eabcc1b
| author | rnateam |
|---|---|
| date | Wed, 21 Dec 2016 17:30:57 -0500 |
| parents | |
| children |
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chrBase chr base strand coverage freqC freqT chr21.9737358 chr21 9737358 F 13 30.77 69.23 chr21.9736774 chr21 9736774 R 10 10.00 90.00 chr21.9746025 chr21 9746025 R 11 72.73 27.27 chr21.9764151 chr21 9764151 R 11 9.09 90.91 chr21.9796637 chr21 9796637 F 12 25.00 75.00 chr21.9797182 chr21 9797182 F 22 54.55 45.45 chr21.9797133 chr21 9797133 R 16 43.75 56.25 chr21.9797132 chr21 9797132 F 15 66.67 33.33 chr21.9797212 chr21 9797212 F 15 13.33 86.67 chr21.9798664 chr21 9798664 F 10 100.00 0.00 chr21.9802590 chr21 9802590 F 19 73.68 26.32 chr21.9802574 chr21 9802574 F 18 72.22 27.78 chr21.9802620 chr21 9802620 F 14 64.29 35.71 chr21.9804873 chr21 9804873 F 11 100.00 0.00 chr21.9804899 chr21 9804899 F 11 27.27 72.73 chr21.9804890 chr21 9804890 F 11 27.27 72.73 chr21.9808158 chr21 9808158 F 14 57.14 42.86 chr21.9808138 chr21 9808138 F 14 42.86 57.14 chr21.9808438 chr21 9808438 F 12 0.00 100.00 chr21.9809998 chr21 9809998 F 204 82.84 17.16 chr21.9817117 chr21 9817117 F 20 0.00 100.00 chr21.9817099 chr21 9817099 F 20 100.00 0.00 chr21.9820652 chr21 9820652 F 414 41.30 58.70 chr21.9820622 chr21 9820622 F 431 3.02 96.98 chr21.9826907 chr21 9826907 F 49 6.12 93.88 chr21.9829072 chr21 9829072 R 11 90.91 0.00 chr21.9829082 chr21 9829082 R 10 100.00 0.00 chr21.9829550 chr21 9829550 F 11 9.09 90.91 chr21.9831075 chr21 9831075 F 15 20.00 80.00 chr21.9840137 chr21 9840137 F 12 66.67 33.33 chr21.9839701 chr21 9839701 F 13 46.15 53.85 chr21.9841811 chr21 9841811 F 14 92.86 7.14 chr21.9841786 chr21 9841786 F 13 100.00 0.00 chr21.9842905 chr21 9842905 F 12 91.67 8.33 chr21.9845819 chr21 9845819 F 11 9.09 90.91 chr21.9847953 chr21 9847953 F 14 100.00 0.00 chr21.9849022 chr21 9849022 F 392 82.65 17.35 chr21.9850215 chr21 9850215 R 16 87.50 12.50 chr21.9850185 chr21 9850185 R 15 73.33 26.67 chr21.9849392 chr21 9849392 F 10 50.00 50.00 chr21.9849386 chr21 9849386 F 10 50.00 50.00 chr21.9853030 chr21 9853030 F 10 90.00 10.00 chr21.9853296 chr21 9853296 F 395 86.33 13.67 chr21.9853326 chr21 9853326 F 379 74.93 25.07 chr21.9854818 chr21 9854818 F 11 81.82 18.18 chr21.9860126 chr21 9860126 F 41 97.56 2.44 chr21.9863481 chr21 9863481 F 25 76.00 24.00 chr21.9865113 chr21 9865113 F 12 50.00 50.00 chr21.9874437 chr21 9874437 F 75 97.33 2.67 chr21.9875688 chr21 9875688 F 12 75.00 25.00 chr21.9880285 chr21 9880285 F 13 46.15 53.85 chr21.9884536 chr21 9884536 F 11 100.00 0.00 chr21.9906700 chr21 9906700 F 23 43.48 56.52 chr21.9906644 chr21 9906644 F 34 85.29 14.71 chr21.9906873 chr21 9906873 F 22 31.82 68.18 chr21.9906926 chr21 9906926 R 11 45.45 54.55 chr21.9906619 chr21 9906619 F 37 78.38 21.62 chr21.9906910 chr21 9906910 R 11 45.45 54.55 chr21.9906847 chr21 9906847 R 15 86.67 13.33 chr21.9906839 chr21 9906839 R 15 53.33 46.67 chr21.9906846 chr21 9906846 F 22 90.91 9.09 chr21.9906928 chr21 9906928 R 11 63.64 36.36 chr21.9906890 chr21 9906890 R 11 9.09 90.91 chr21.9906841 chr21 9906841 R 15 100.00 0.00 chr21.9906864 chr21 9906864 F 22 63.64 36.36 chr21.9906824 chr21 9906824 R 15 66.67 33.33 chr21.9906902 chr21 9906902 R 11 0.00 100.00 chr21.9906805 chr21 9906805 R 15 86.67 13.33 chr21.9906869 chr21 9906869 F 22 0.00 100.00 chr21.9906616 chr21 9906616 F 37 72.97 27.03 chr21.9906931 chr21 9906931 R 11 45.45 54.55 chr21.9906827 chr21 9906827 R 15 46.67 53.33 chr21.9906634 chr21 9906634 F 34 64.71 35.29 chr21.9906704 chr21 9906704 F 17 76.47 23.53 chr21.9906907 chr21 9906907 R 11 36.36 63.64 chr21.9906681 chr21 9906681 F 26 42.31 57.69 chr21.9906724 chr21 9906724 F 21 80.95 19.05 chr21.9906822 chr21 9906822 R 15 93.33 6.67 chr21.9906808 chr21 9906808 R 15 73.33 26.67 chr21.9906676 chr21 9906676 F 26 92.31 7.69 chr21.9906934 chr21 9906934 R 11 81.82 18.18 chr21.9906884 chr21 9906884 F 22 36.36 63.64 chr21.9906714 chr21 9906714 F 21 90.48 9.52 chr21.9906640 chr21 9906640 F 34 0.00 100.00 chr21.9906604 chr21 9906604 F 37 89.19 10.81 chr21.9906889 chr21 9906889 F 22 0.00 100.00 chr21.9906694 chr21 9906694 F 26 57.69 42.31 chr21.9906885 chr21 9906885 R 11 0.00 100.00 chr21.9911345 chr21 9911345 F 17 58.82 41.18 chr21.9913543 chr21 9913543 F 28 100.00 0.00 chr21.9913575 chr21 9913575 F 28 92.86 7.14 chr21.9917629 chr21 9917629 F 14 7.14 92.86 chr21.9917645 chr21 9917645 F 11 45.45 54.55 chr21.9917648 chr21 9917648 F 11 63.64 36.36 chr21.9927687 chr21 9927687 R 14 92.86 7.14 chr21.9927676 chr21 9927676 R 18 94.44 5.56 chr21.9927527 chr21 9927527 F 14 78.57 21.43 chr21.9944505 chr21 9944505 F 40 62.50 37.50 chr21.9944663 chr21 9944663 R 31 80.65 19.35 chr21.9959407 chr21 9959407 F 40 67.50 32.50 chr21.9959569 chr21 9959569 R 39 89.74 10.26 chr21.9959577 chr21 9959577 R 39 92.31 7.69 chr21.9959644 chr21 9959644 R 31 45.16 54.84 chr21.9959541 chr21 9959541 R 39 82.05 17.95 chr21.9959650 chr21 9959650 R 32 65.62 34.38 chr21.9967634 chr21 9967634 R 56 51.79 48.21 chr21.9990967 chr21 9990967 F 16 75.00 25.00 chr21.10009672 chr21 10009672 R 11 100.00 0.00 chr21.10012079 chr21 10012079 F 22 72.73 27.27 chr21.10011938 chr21 10011938 R 20 85.00 15.00 chr21.10011925 chr21 10011925 R 20 30.00 70.00 chr21.10011990 chr21 10011990 F 25 56.00 44.00 chr21.10011974 chr21 10011974 R 20 60.00 40.00 chr21.10012089 chr21 10012089 F 22 54.55 45.45 chr21.10011872 chr21 10011872 F 14 57.14 42.86 chr21.10012101 chr21 10012101 F 20 60.00 40.00 chr21.10011855 chr21 10011855 F 14 85.71 14.29 chr21.10011964 chr21 10011964 R 21 66.67 33.33 chr21.10012075 chr21 10012075 F 22 72.73 27.27 chr21.10012030 chr21 10012030 F 24 75.00 25.00 chr21.10012008 chr21 10012008 F 24 54.17 45.83 chr21.10011833 chr21 10011833 F 14 100.00 0.00 chr21.10011861 chr21 10011861 F 13 69.23 30.77 chr21.10011841 chr21 10011841 F 14 57.14 42.86 chr21.10011876 chr21 10011876 F 11 81.82 18.18 chr21.10012095 chr21 10012095 F 21 80.95 19.05 chr21.10011858 chr21 10011858 F 13 61.54 38.46 chr21.10011954 chr21 10011954 R 16 75.00 25.00 chr21.10011987 chr21 10011987 F 25 92.00 8.00 chr21.10012069 chr21 10012069 F 22 27.27 72.73 chr21.10011878 chr21 10011878 F 12 100.00 0.00 chr21.10012924 chr21 10012924 F 14 57.14 42.86 chr21.10012934 chr21 10012934 R 10 40.00 60.00 chr21.10012894 chr21 10012894 F 14 100.00 0.00 chr21.10012940 chr21 10012940 R 10 40.00 60.00 chr21.10012902 chr21 10012902 F 15 80.00 20.00 chr21.10012891 chr21 10012891 F 15 93.33 6.67 chr21.10012921 chr21 10012921 F 13 100.00 0.00 chr21.10012900 chr21 10012900 F 16 100.00 0.00 chr21.10012898 chr21 10012898 F 14 100.00 0.00 chr21.10012887 chr21 10012887 F 15 93.33 6.67 chr21.10012876 chr21 10012876 F 14 85.71 14.29 chr21.10012699 chr21 10012699 F 10 30.00 70.00 chr21.10012942 chr21 10012942 R 10 20.00 80.00 chr21.10012947 chr21 10012947 R 10 100.00 0.00 chr21.10012881 chr21 10012881 F 15 0.00 100.00 chr21.10012696 chr21 10012696 F 10 100.00 0.00 chr21.10012883 chr21 10012883 F 15 93.33 6.67 chr21.10012938 chr21 10012938 R 10 60.00 40.00 chr21.10012944 chr21 10012944 R 10 50.00 50.00 chr21.10013827 chr21 10013827 R 11 100.00 0.00 chr21.10014621 chr21 10014621 F 10 30.00 70.00 chr21.10022131 chr21 10022131 R 24 16.67 83.33 chr21.10022157 chr21 10022157 R 24 79.17 20.83 chr21.10022165 chr21 10022165 R 24 75.00 25.00 chr21.10055609 chr21 10055609 F 11 90.91 9.09 chr21.10064601 chr21 10064601 F 10 80.00 20.00 chr21.10065208 chr21 10065208 F 14 28.57 71.43 chr21.10065061 chr21 10065061 F 41 46.34 53.66 chr21.10065022 chr21 10065022 F 42 92.86 7.14 chr21.10066191 chr21 10066191 F 12 75.00 25.00 chr21.10070955 chr21 10070955 R 10 40.00 60.00 chr21.10071163 chr21 10071163 R 10 0.00 100.00 chr21.10076490 chr21 10076490 F 11 54.55 45.45 chr21.10077904 chr21 10077904 R 16 50.00 50.00 chr21.10077705 chr21 10077705 F 75 80.00 20.00 chr21.10077699 chr21 10077699 F 74 78.38 21.62 chr21.10086785 chr21 10086785 F 42 78.57 21.43 chr21.10087013 chr21 10087013 F 14 78.57 21.43 chr21.10087014 chr21 10087014 R 13 38.46 61.54 chr21.10092223 chr21 10092223 R 21 100.00 0.00 chr21.10099942 chr21 10099942 F 31 74.19 25.81 chr21.10099950 chr21 10099950 F 31 90.32 9.68 chr21.10102508 chr21 10102508 F 10 20.00 80.00 chr21.10108412 chr21 10108412 F 12 83.33 16.67 chr21.10111127 chr21 10111127 F 20 55.00 45.00 chr21.10111115 chr21 10111115 F 21 90.48 9.52 chr21.10112133 chr21 10112133 R 11 72.73 27.27 chr21.10114141 chr21 10114141 R 11 100.00 0.00 chr21.10114147 chr21 10114147 R 11 100.00 0.00 chr21.10114305 chr21 10114305 R 25 60.00 40.00 chr21.10114351 chr21 10114351 R 25 100.00 0.00 chr21.10114526 chr21 10114526 F 14 100.00 0.00 chr21.10114496 chr21 10114496 F 13 61.54 38.46 chr21.10114345 chr21 10114345 R 25 32.00 68.00 chr21.10114343 chr21 10114343 R 25 52.00 48.00 chr21.10115750 chr21 10115750 F 26 80.77 19.23 chr21.10116599 chr21 10116599 R 34 88.24 11.76 chr21.10116637 chr21 10116637 R 35 88.57 11.43 chr21.10118632 chr21 10118632 R 10 100.00 0.00 chr21.10118677 chr21 10118677 R 12 0.00 100.00 chr21.10120990 chr21 10120990 F 12 100.00 0.00 chr21.10121028 chr21 10121028 F 14 85.71 14.29 chr21.10121198 chr21 10121198 F 11 63.64 36.36 chr21.10120603 chr21 10120603 F 36 11.11 88.89 chr21.10121171 chr21 10121171 F 153 66.01 33.99 chr21.10121126 chr21 10121126 F 152 95.39 4.61 chr21.10120600 chr21 10120600 R 21 90.48 9.52 chr21.10120643 chr21 10120643 F 37 10.81 89.19 chr21.10119874 chr21 10119874 R 12 50.00 50.00 chr21.10120599 chr21 10120599 F 36 97.22 2.78 chr21.10121033 chr21 10121033 F 14 100.00 0.00 chr21.10120079 chr21 10120079 R 13 69.23 30.77 chr21.10120091 chr21 10120091 R 14 50.00 50.00 chr21.10120564 chr21 10120564 R 18 66.67 33.33 chr21.10120634 chr21 10120634 F 37 10.81 89.19 chr21.10120584 chr21 10120584 R 20 95.00 5.00 chr21.10122181 chr21 10122181 F 11 100.00 0.00 chr21.10121789 chr21 10121789 F 15 93.33 6.67 chr21.10121761 chr21 10121761 F 15 100.00 0.00 chr21.10124972 chr21 10124972 R 11 72.73 27.27 chr21.10128775 chr21 10128775 F 42 92.86 7.14 chr21.10128867 chr21 10128867 F 64 96.88 3.12 chr21.10128883 chr21 10128883 F 65 80.00 20.00 chr21.10128673 chr21 10128673 F 37 86.49 13.51 chr21.10128639 chr21 10128639 F 62 56.45 43.55 chr21.10128661 chr21 10128661 F 37 89.19 10.81 chr21.10128707 chr21 10128707 F 12 75.00 25.00 chr21.10128682 chr21 10128682 F 18 0.00 100.00 chr21.10128603 chr21 10128603 F 25 96.00 4.00 chr21.10128705 chr21 10128705 F 11 100.00 0.00 chr21.10128662 chr21 10128662 R 24 70.83 25.00 chr21.10128683 chr21 10128683 R 17 41.18 58.82 chr21.10128989 chr21 10128989 R 19 84.21 15.79 chr21.10129003 chr21 10129003 R 17 82.35 17.65 chr21.10128734 chr21 10128734 F 52 92.31 7.69 chr21.10128964 chr21 10128964 R 20 75.00 25.00 chr21.10128659 chr21 10128659 F 37 54.05 45.95 chr21.10128720 chr21 10128720 F 14 71.43 28.57 chr21.10128601 chr21 10128601 F 24 100.00 0.00 chr21.10128839 chr21 10128839 F 57 92.98 7.02 chr21.10128735 chr21 10128735 R 18 61.11 38.89 chr21.10128748 chr21 10128748 F 52 80.77 19.23 chr21.10128708 chr21 10128708 R 16 100.00 0.00 chr21.10128721 chr21 10128721 R 18 100.00 0.00 chr21.10128738 chr21 10128738 F 52 65.38 34.62 chr21.10128850 chr21 10128850 F 58 74.14 25.86 chr21.10128591 chr21 10128591 R 12 83.33 16.67 chr21.10128702 chr21 10128702 F 12 100.00 0.00 chr21.10128980 chr21 10128980 R 20 30.00 70.00 chr21.10128706 chr21 10128706 R 17 100.00 0.00 chr21.10128674 chr21 10128674 R 23 73.91 26.09 chr21.10128609 chr21 10128609 F 25 92.00 8.00 chr21.10128711 chr21 10128711 R 18 77.78 22.22 chr21.10128670 chr21 10128670 F 37 89.19 10.81 chr21.10128881 chr21 10128881 F 65 72.31 27.69 chr21.10128671 chr21 10128671 R 23 82.61 17.39 chr21.10128991 chr21 10128991 R 17 76.47 23.53 chr21.10128617 chr21 10128617 F 25 88.00 12.00 chr21.10128660 chr21 10128660 R 24 54.17 45.83 chr21.10128590 chr21 10128590 F 25 100.00 0.00 chr21.10128745 chr21 10128745 F 52 26.92 73.08 chr21.10128564 chr21 10128564 R 12 91.67 8.33 chr21.10128710 chr21 10128710 F 12 91.67 8.33 chr21.10128758 chr21 10128758 F 42 59.52 40.48 chr21.10129546 chr21 10129546 F 22 77.27 22.73 chr21.10129550 chr21 10129550 F 22 63.64 36.36 chr21.10133080 chr21 10133080 F 78 84.62 15.38 chr21.10132177 chr21 10132177 F 75 49.33 50.67 chr21.10131149 chr21 10131149 R 19 57.89 42.11 chr21.10133043 chr21 10133043 R 21 100.00 0.00 chr21.10133081 chr21 10133081 R 20 80.00 20.00 chr21.10132089 chr21 10132089 R 27 88.89 11.11 chr21.10132122 chr21 10132122 F 13 76.92 23.08 chr21.10130568 chr21 10130568 R 20 25.00 75.00 chr21.10130556 chr21 10130556 R 20 45.00 55.00 chr21.10131969 chr21 10131969 F 21 85.71 14.29 chr21.10132221 chr21 10132221 F 14 64.29 35.71 chr21.10133159 chr21 10133159 F 40 77.50 22.50 chr21.10133402 chr21 10133402 R 27 22.22 77.78 chr21.10131434 chr21 10131434 R 12 91.67 8.33 chr21.10133111 chr21 10133111 R 55 89.09 10.91 chr21.10132418 chr21 10132418 F 38 97.37 2.63 chr21.10132094 chr21 10132094 F 13 100.00 0.00 chr21.10132081 chr21 10132081 R 25 64.00 36.00 chr21.10132033 chr21 10132033 F 15 60.00 40.00 chr21.10132130 chr21 10132130 F 59 88.14 11.86 chr21.10132095 chr21 10132095 R 26 84.62 15.38 chr21.10133160 chr21 10133160 R 55 80.00 20.00 chr21.10131208 chr21 10131208 R 17 47.06 52.94 chr21.10133049 chr21 10133049 R 27 59.26 40.74 chr21.10133401 chr21 10133401 F 39 46.15 53.85 chr21.10133008 chr21 10133008 R 32 71.88 28.12 chr21.10132131 chr21 10132131 R 13 100.00 0.00 chr21.10132265 chr21 10132265 F 13 61.54 38.46 chr21.10133048 chr21 10133048 F 71 88.73 11.27 chr21.10132398 chr21 10132398 F 33 90.91 9.09 chr21.10132934 chr21 10132934 F 10 60.00 40.00 chr21.10133513 chr21 10133513 F 13 0.00 100.00 chr21.10133091 chr21 10133091 F 79 50.63 49.37 chr21.10131118 chr21 10131118 R 14 7.14 92.86 chr21.10133092 chr21 10133092 R 20 45.00 55.00 chr21.10133056 chr21 10133056 F 70 72.86 27.14 chr21.10132009 chr21 10132009 F 11 54.55 45.45 chr21.10135604 chr21 10135604 F 10 20.00 80.00 chr21.10137372 chr21 10137372 R 23 95.65 4.35 chr21.10137356 chr21 10137356 R 23 13.04 86.96 chr21.10137299 chr21 10137299 F 13 46.15 53.85 chr21.10136614 chr21 10136614 F 64 95.31 4.69 chr21.10136600 chr21 10136600 R 24 62.50 37.50 chr21.10136851 chr21 10136851 F 12 41.67 58.33 chr21.10135965 chr21 10135965 F 25 76.00 24.00 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