# HG changeset patch
# User rnateam
# Date 1422367575 18000
# Node ID 2c039fc73f1f7c7074b58375fe28a33812d2e80c

Imported from capsule None

diff -r 000000000000 -r 2c039fc73f1f quantifier.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/quantifier.xml	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,145 @@
+<tool id="rbc_mirdeep2_quantifier" name="MiRDeep2 Quantifier" version="2.0.0">
+    <description>
+<![CDATA[
+fast quantitation of reads mapping to known miRBase precursors
+]]>
+    </description>
+    <requirements>
+        <requirement type="package" version="2.0">mirdeep2_quantifier</requirement>
+        <requirement type="package" version="0.12.7">bowtie</requirement>
+        <requirement type="package" version="5.18.1">perl</requirement>
+        <requirement type="package" version="1.8.5">vienna_rna</requirement>
+        <requirement type="package" version="2.023">pdf_api2</requirement>
+    </requirements>
+
+    <command>
+<![CDATA[
+    quantifier.pl 
+    
+    -p $precursors 
+    
+    -m $mature 
+    
+    -r $reads
+    
+    #if $species.value != 'all'
+        -t $species
+    #end if
+    
+    #if $star_sequences
+        -s $star_sequences
+    #end if
+    
+    $sortReadsInPDF
+    $flexibleIdMapping
+    $skipFileConversion
+    $wholePrecursAsMature
+    $discardReadMultiMap
+    
+    -e $upstreamNtides
+    -f $downstreamNtides
+    -g $allowedMismatches
+    -y galaxy
+    
+     ## html output
+    ;
+    cp expression_galaxy.html $html 2> /dev/null
+    
+    ## move pdf directory to be accessible from the new index.html
+    ;
+    mkdir -p $html.files_path 2> /dev/null
+    ;
+    cp -R pdfs_galaxy $html.files_path 2> /dev/null
+    
+]]>
+    </command>
+    <stdio>
+        <!-- Anything other than zero is an error -->
+        <exit_code range="1:" />
+        <exit_code range=":-1" />
+        <!-- In case the return code has not been set propery check stderr too -->
+        <regex match="Error:" />
+        <regex match="Exception:" />
+    </stdio>
+    <inputs>
+        <param name="reads" format="fasta" type="data" label="Collapsed deep sequencing reads" help="Reads in fasta format. (-r)"/>
+        <param name="precursors" format="fasta" type="data" label="Precursor sequences" help="miRNA precursor sequences from miRBase. (-p)"/>
+        <param name="mature" format="fasta" type="data" label="Mature miRNA sequences" help="Mature miRNA sequences from miRBase. (-m)"/>
+        <param name="species" type="select" label="Search in species" help="If not searching in a specific species all species in your files will be analyzed. (-t)">
+            <option value="all">All species</option>
+            <option value="tni">tetraodon</option>
+            <option value="dps">d.pseudoobscura</option>
+            <option value="dya">d.yakuba</option>
+            <option value="ame">a.mellifera</option>
+            <option value="dmo">d.mojavensis</option>
+            <option value="cel">worm</option>
+            <option value="aga">a.gambiae</option>
+            <option value="cbr">c.briggsae</option>
+            <option value="cin">c.intestinalis</option>
+            <option value="mmu">mouse</option>
+            <option value="xtr">x.tropicalis</option>
+            <option value="eca">horse</option>
+            <option value="cfa">dog</option>
+            <option value="fru">fugu</option>
+            <option value="bta">cow</option>
+            <option value="der">d.erecta</option>
+            <option value="dgr">d.grimshawi</option>
+            <option value="gga">chicken</option>
+            <option value="spu">s.purpuratus</option>
+            <option value="bfl">lancelet</option>
+            <option value="ptr">chimp</option>
+            <option value="dse">d.sechellia</option>
+            <option value="dpe">d.persimilis</option>
+            <option value="dvi">d.virilis</option>
+            <option value="rno">rat</option>
+            <option value="dme">d.melanogaster</option>
+            <option value="lca">cat</option>
+            <option value="sja">c.japonica</option>
+            <option value="dan">d.ananassae</option>
+            <option value="hsa">human</option>
+            <option value="dsi">d.simulans</option>
+        </param>
+        <param name="star_sequences" format="fasta" type="data" optional="true" label="Star sequences" help="From miRBase in fasta format (optional) (-s)"/>
+        
+       <!-- <param name="generatePDFs" type="boolean" checked="true" truevalue="" falsevalue="-d" label="Generate PDFs" help="(-d)"/> -->
+        <param name="sortReadsInPDF" type="boolean" checked="true" truevalue="" falsevalue="-o" label="Sort reads by sample in PDF" help="(-o)"/>
+        <param name="flexibleIdMapping" type="boolean" checked="false" truevalue="-k" falsevalue="" label="Include ID-flexible mapping" help="Also considers precursor-mature mappings that have different ids, eg let7c would be allowed to map to pre-let7a. (-k)"/>
+        <param name="skipFileConversion" type="boolean" checked="false" truevalue="-n" falsevalue="" label="Skip file conversion" help="(-n)"/>
+        <param name="skipPrecursMapping" type="boolean" checked="false" truevalue="-x" falsevalue="" label="Skip mapping against precursor" help="(-x)"/>
+        <!-- <param name="noMrdPDF" type="boolean" checked="false" truevalue="-j" falsevalue="" label="Do not create output.mrd file or PDFs" help="(-j)"/> -->
+        <param name="wholePrecursAsMature" type="boolean" checked="false" truevalue="-w" falsevalue="" label="Consider the whole precursor as the 'mature sequence'" help="(-w)"/>
+        <param name="discardReadMultiMap" type="boolean" checked="false" truevalue="-U" falsevalue="" label="Discard all read multimapper" help="(-U)"/>
+        
+        <param name="upstreamNtides" type="integer" value="2" minvalue="0" label="Upstream nucleotides" help="Number of nucleotides upstream of the mature sequence to consider. (-e)"/>
+        <param name="downstreamNtides" type="integer" value="5" minvalue="0" label="Downstream nucleotides" help="Number of nucleotides downstream of the mature sequence to consider. (-f)"/>
+        <param name="allowedMismatches" type="integer" value="1" minvalue="0" label="Allowed mismatches" help="Number of allowed mismatches when mapping reads to precursors. (-g)"/>
+    </inputs>
+    <outputs>
+        <data name="miRNAsExpressed" format="tabular" from_work_dir="miRNAs_expressed_all_samples_galaxy.csv" label="output of ${tool.name} on ${on_string}"/>
+        <data format="html" name="html" label="${tool.name} on ${on_string} (html report)"/>
+    </outputs>
+    <tests>
+        <test>
+            <param name="reads" value="reads_collapsed.fa"/>
+            <param name="precursors" value="precursors_ref_this_species.fa"/>
+            <param name="mature" value="mature_ref_this_species.fa"/>
+            <param name="species" value="cel"/>
+            <output name="miRNAsExpressed" file="miRNAs_expressed_all_samples.csv"/>
+            <output name="html" file="expression_galaxy.html"/>
+        </test>
+    </tests>
+    <help>
+<![CDATA[
+**What MiRDeep2 Quantifier does**
+
+The module maps the deep sequencing reads to predefined miRNA precursors and determines by that the expression of the corresponding miRNAs. 
+First, the predefined mature miRNA sequences are mapped to the predefined precursors. Optionally, predefined star sequences can be mapped to the precursors too. 
+By that the mature and star sequence in the precursors are determined. Second, the deep sequencing reads are mapped to the precursors. 
+The number of reads falling into an interval 2nt upstream and 5nt downstream of the mature/star sequence is determined.
+]]>
+    </help>
+    <citations>
+        <citation type="doi">10.1093/nar/gkr688</citation>
+        <citation type="doi">10.1002/0471250953.bi1210s36</citation>
+    </citations>
+</tool>
diff -r 000000000000 -r 2c039fc73f1f test-data/expression_galaxy.html
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/expression_galaxy.html	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,374 @@
+<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN"
+    "http://www.w3.org/TR/html4/strict.dtd">
+    <html>
+    <head>
+    <title>miRDeep2</title>
+    <!-- CSS code -->
+    <style type="text/css">
+    body{
+      font: .75em Arial,sans-serif; 
+      background: #FFFFFF; 
+      color: #333333
+    }
+div#
+container
+{
+  width: 1000px; 
+  margin:0 auto
+  }
+h1{ 
+  color: #F60; 
+  margin: 1em 0 0; 
+    letter-spacing: -2px; 
+}
+p{
+  margin: 0 0 1.7em; 
+}
+
+a.tooltip{
+	text-decoration:none;
+	color:black;
+        font-weight:bold;
+}
+
+a.tooltip:hover
+{    position: relative;               
+     background: transparent;          
+	
+}  
+
+a.tooltip span  
+{    position: absolute;               
+     visibility: hidden;               
+
+     width: 20em;                      
+     top: 1.5em;             
+     background: #ffffdd;                    
+}
+
+a.tooltip:hover span  
+{    visibility: visible;   }
+
+
+a.tooltip2{
+	text-decoration:none;
+	color:black;
+        font-weight:bold;
+}
+
+a.tooltip2:hover
+{    position: relative;               
+     background: transparent;          
+	
+}  
+
+a.tooltip2 span  
+{    position: absolute;               
+     visibility: hidden;               
+
+     width: 20em;                      
+     top: 1.5em;left:-10em;             
+     background: #ffffdd;                    
+}
+
+a.tooltip2:hover span  
+{    visibility: visible;   }
+
+
+a.tooltip3{
+	text-decoration:none;
+	color:black;
+        font-weight:bold;
+}
+
+a.tooltip3:hover
+{    position: relative;               
+     background: transparent;          
+	
+}  
+
+a.tooltip3 span  
+{    position: absolute;               
+     visibility: hidden;               
+
+     width: 20em;                      
+     top: 3em;             
+     background: #ffffdd;                    
+}
+
+a.tooltip3:hover span  
+{    visibility: visible;   }
+
+
+a.tooltip4{
+	text-decoration:none;
+	color:black;
+        font-weight:bold;
+}
+
+a.tooltip4:hover
+{    position: relative;               
+     background: transparent;          
+	
+}  
+
+a.tooltip4 span  
+{    position: absolute;               
+     visibility: hidden;               
+
+     width: 20em;                      
+     top:3em;left:-10em;             
+     background: #ffffdd;                    
+}
+
+a.tooltip4:hover span  
+{    visibility: visible;   }
+
+
+
+</style>
+        
+    </head>
+    <body>
+    <table border="0" width="100%">
+    <colgroup>
+    <col width="5*">
+    <col width="5*">
+    </colgroup>
+    <tr height="200" valign="top">
+    <td><font face="Times New Roman" size="8">
+    <b><a href="http://www.mdc-berlin.de/en/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/index.html" target="_blank" style="color:Black;text-decoration:none" title="miRDeep2 homepage at MDC-Berlin" >miRDeep2</a></b>
+    
+    
+    <br>
+    <br>
+    </font></td>
+    <td> <a href="http://www.mdc-berlin.de/en/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/index.html" target="_blank" >
+    <img src="http://www.mdc-berlin.de/de/research/research_teams/systems_biology_of_gene_regulatory_elements/projects/miRDeep/mirdeep.jpg" style="border-style: none" name="precursor miRNA" title="miRDeep2 homepage at MDC-Berlin" align=right alt="miRDeep home"/></a></td>
+    </tr>
+    </table>
+  
+<br>
+    <br>
+    <br><h2></h2><br>
+    <font face="Times New Roman" size="2">
+    <table border="1">
+<th><a href="" class="tooltip3">miRBase precursor id<span>Clicking this field will display a pdf of the structure and read signature of the miRNA.</span></a></th>
+
+<th><a href="" class="tooltip3">total read count<span>this is the sum of read counts for the mature and star miRNAs.</span></a></th>
+
+<th><a href="" class="tooltip3">mature read count(s)<span>this is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the mature miRNA, including 2 nts upstream and 5 nts downstream. If more than one mature sequence is given this will be a comma separated list. In parenthesis are normalized read counts shown.</span></a></th>
+
+<th><a href="" class="tooltip3">star read count<span>this is the number of reads that map to the miRNA hairpin and are contained in the sequence covered by the star miRNA, including 2 nts upstream and 5 nts downstream. This field is empty unless a reference star miRNA was given as input to quantifier.pl. If more than one mature sequence is given this will be a comman separated list</span></a></th>
+
+<th><a href="http://www.ncbi.nlm.nih.gov/entrez/utils/fref.fcgi?PrId=3051&itool=AbstractPlus-def&uid=15217813&nlmid=9808944&db=pubmed&url=http://bioinformatics.oxfordjournals.org/cgi/pmidlookup?view=long&pmid=15217813" target="blank"class="tooltip3">remaining reads<span>this is the number of reads that did not map to any of the mature and star sequences</span></a></th>
+
+<th><a href="" class="tooltip3">UCSC browser<span>if a species name was input to miRDeep2, then clicking this field will initiate a UCSC blat search of the miRNA precursor sequence against the reference genome.</span></a></th>
+
+<th><a href="" class="tooltip3">NCBI blastn<span>clicking this field will initiate a NCBI blastn search of the miRNA precursor sequence against the nr/nt database (non-redundant collection of all NCBI nucleotide sequences).</span></a></th>
+
+<th><a href="" class="tooltip3">miRBase mature sequence(s)<span>this is/are the mature miRNA sequence(s) input to quantifier.pl.</span></a></th>
+
+<th><a href="" class="tooltip3">miRBase star sequence(s)<span>this is/are the star miRNA sequence(s) input to quantifier.pl. This field is empty unless a reference star miRNA was given as input to quantifier.pl.</span></a></th>
+
+<th><a href="" class="tooltip4">miRBase precursor sequence<span>this is the precursor miRNA sequence input to quantifier.pl.</span></a></th>
+
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-37.pdf">cel-mir-37</a></td>
+            <td>118250</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-37" target="_blank">cel-miR-37</a></td><td><nobr>118131.00</nobr></td><td><nobr>676208.96</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">119</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=uucuagaaacccuuggaccaguguggguguccguugcggugcuacauucucuaaucuguaucaccgggugaacacuugcagugguccucgugguuucu&JOB_TITLE=cel-mir-37&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>ucaccgggugaacacuugcagu</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>uucuagaaacccuuggaccaguguggguguccguugcggugcuacauucucuaaucuguaucaccgggugaacacuugcagugguccucgugguuucu</td>
+			</tr>     
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-40.pdf">cel-mir-40</a></td>
+            <td>32947</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-40" target="_blank">cel-miR-40</a></td><td><nobr>32878.00</nobr></td><td><nobr>188201.22</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">69</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=uccuguccgcaccucaguggauguaugccaugaugauaagauaucagaaauccuaucaccggguguacaucagcuaaggugcggguacaggu&JOB_TITLE=cel-mir-40&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>ucaccggguguacaucagcuaa</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>uccuguccgcaccucaguggauguaugccaugaugauaagauaucagaaauccuaucaccggguguacaucagcuaaggugcggguacaggu</td>
+			</tr>     
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-36.pdf">cel-mir-36</a></td>
+            <td>14535</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-36" target="_blank">cel-miR-36</a></td><td><nobr>14483.00</nobr></td><td><nobr>82904.02</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">52</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=caccgcugucggggaaccgcgccaauuuucgcuucagugcuagaccauccaaagugucuaucaccgggugaaaauucgcauggguccccgacgcgga&JOB_TITLE=cel-mir-36&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>ucaccgggugaaaauucgcaug</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>caccgcugucggggaaccgcgccaauuuucgcuucagugcuagaccauccaaagugucuaucaccgggugaaaauucgcauggguccccgacgcgga</td>
+			</tr>     
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-229.pdf">cel-mir-229</a></td>
+            <td>4000</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-229" target="_blank">cel-miR-229</a></td><td><nobr>4000.00</nobr></td><td><nobr>22896.92</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">0</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=cgccggcaaugacacugguuaucuuuuccaucguggaaugccccccauugauuuuuuccccuuuucggggggaaaaaauuggaaacgagaaagguaucgggugucauagccggcg&JOB_TITLE=cel-mir-229&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>aaugacacugguuaucuuuuccaucg</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>cgccggcaaugacacugguuaucuuuuccaucguggaaugccccccauugauuuuuuccccuuuucggggggaaaaaauuggaaacgagaaagguaucgggugucauagccggcg</td>
+			</tr>     
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-39.pdf">cel-mir-39</a></td>
+            <td>3852</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-39" target="_blank">cel-miR-39</a></td><td><nobr>2994.00</nobr></td><td><nobr>17138.34</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">858</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=uauaccgagagcccagcugauuucgucuugguaauaagcucgucauugagauuaucaccggguguaaaucagcuuggcucugguguc&JOB_TITLE=cel-mir-39&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>ucaccggguguaaaucagcuug</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>uauaccgagagcccagcugauuucgucuugguaauaagcucgucauugagauuaucaccggguguaaaucagcuuggcucugguguc</td>
+			</tr>     
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-38.pdf">cel-mir-38</a></td>
+            <td>2131</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-38" target="_blank">cel-miR-38</a></td><td><nobr>2123.00</nobr></td><td><nobr>12152.54</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">8</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=ucugugagccagguccuguuccgguuuuuuccguggugauaacgcauccaaaagucucuaucaccgggagaaaaacuggaguaggaccugugacucau&JOB_TITLE=cel-mir-38&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>ucaccgggagaaaaacuggagu</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>ucugugagccagguccuguuccgguuuuuuccguggugauaacgcauccaaaagucucuaucaccgggagaaaaacuggaguaggaccugugacucau</td>
+			</tr>     
+<tr><td nowrap="nowrap"><a href="pdfs_galaxy/cel-mir-41.pdf">cel-mir-41</a></td>
+            <td>164</td>            
+            <td>
+
+
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a href="http://www.mirbase.org/cgi-bin/query.pl?terms=cel-mir-41" target="_blank">cel-miR-41</a></td><td><nobr>87.00</nobr></td><td><nobr>498.01</nobr></td></tr>
+</table>
+
+</td>
+
+
+<td>
+<table><tr><td WIDTH=55>id</td><td>seq</td><td>seq(norm)</td>
+<tr><td  nowrap="nowrap"><a>na</a></td><td><nobr>0</nobr></td><td><nobr>0</nobr></td></tr>
+</table>
+
+</td>
+
+
+           
+			<td nowrap="nowrap">77</td>
+            <td> - </td>
+            <td><a href=http://blast.ncbi.nlm.nih.gov/Blast.cgi?QUERY=gggucccagagaccuuggugguuuuucucugcagugauagauacuucuaacaacucgcuaucaccgggugaaaaaucaccuaggucuggagccuccu&JOB_TITLE=cel-mir-41&db=nucleotide&QUERY_FROM=&QUERY_TO=&QUERYFILE=&GENETIC_CODE=1&SUBJECTS=&stype=nucleotide&SUBJECTS_FROM=&SUBJECTS_TO=&SUBJECTFILE=&DBTYPE=gc&DATABASE=nr&EQ_MENU=&NUM_ORG=1&EQ_TEXT=&BLAST_PROGRAMS=blastn&PHI_PATTERN=&MAX_NUM_SEQ=100&SHORT_QUERY_ADJUST=on&EXPECT=10&WORD_SIZE=7&MATRIX_NAME=PAM30&MATCH_SCORES=2,-3&GAPCOSTS=5+2&COMPOSITION_BASED_STATISTICS=0&FILTER=L&REPEATS=repeat_9606&FILTER=m&TEMPLATE_LENGTH=0&TEMPLATE_TYPE=0&PSSM=&I_THRESH=&SHOW_OVERVIEW=true&SHOW_LINKOUT=true&GET_SEQUENCE=auauauaauauauauauauuauaa&FORMAT_OBJECT=Alignment&FORMAT_TYPE=HTML&ALIGNMENT_VIEW=Pairwise&MASK_CHAR=2&MASK_COLOR=1&DESCRIPTIONS=100&ALIGNMENTS=100&NEW_VIEW=true&OLD_BLAST=false&NCBI_GI=false&SHOW_CDS_FEATURE=false&NUM_OVERVIEW=100&FORMAT_EQ_TEXT=&FORMAT_ORGANISM=&EXPECT_LOW=&EXPECT_HIGH=&QUERY_INDEX=&CLIENT=web&SERVICE=plain&CMD=request&PAGE=Nucleotides&PROGRAM=blastn&MEGABLAST=&RUN_PSIBLAST=&TWO_HITS=&DEFAULT_PROG=megaBlast&WWW_BLAST_TYPE=&DB_ABBR=&SAVED_PSSM=&SELECTED_PROG_TYPE=blastn&SAVED_SEARCH=true&BLAST_SPEC=&QUERY_BELIEVE_DEFLINE=&DB_DIR_PREFIX=&USER_DATABASE=&USER_WORD_SIZE=&USER_MATCH_SCORES=&USER_FORMAT_DEFAULTS=&NO_COMMON=&NUM_DIFFS=2&NUM_OPTS_DIFFS=1&UNIQ_DEFAULTS_NAME=A_SearchDefaults_1Mn7ZD_2Sq4_1Z58HQ5Jb_23tpbD_167y9p&PAGE_TYPE=BlastSearch&USER_DEFAULT_PROG_TYPE=blastn&USER_DEFAULT_MATCH_SCORES=3. target="_blank">blast</a></td>
+            <td><table><tr><td>ucaccgggugaaaaaucaccua</td></tr></table></td>
+<td><table><tr><td>-</td></tr></table></td>
+<td>gggucccagagaccuuggugguuuuucucugcagugauagauacuucuaacaacucgcuaucaccgggugaaaaaucaccuaggucuggagccuccu</td>
+			</tr>     
+</table>
+</body>
+</html>
diff -r 000000000000 -r 2c039fc73f1f test-data/mature_ref_this_species.fa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/mature_ref_this_species.fa	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,14 @@
+>cel-miR-36
+TCACCGGGTGAAAATTCGCATG
+>cel-miR-37
+TCACCGGGTGAACACTTGCAGT
+>cel-miR-38
+TCACCGGGAGAAAAACTGGAGT
+>cel-miR-39
+TCACCGGGTGTAAATCAGCTTG
+>cel-miR-40
+TCACCGGGTGTACATCAGCTAA
+>cel-miR-41
+TCACCGGGTGAAAAATCACCTA
+>cel-miR-229
+AATGACACTGGTTATCTTTTCCATCG
diff -r 000000000000 -r 2c039fc73f1f test-data/miRNAs_expressed_all_samples.csv
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/miRNAs_expressed_all_samples.csv	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,8 @@
+#miRNA	read_count	precursor	total	seq	seq(norm)
+cel-miR-229	4000.00	cel-mir-229	4000.00	4000.00	22896.92
+cel-miR-36	14483.00	cel-mir-36	14483.00	14483.00	82904.02
+cel-miR-37	118131.00	cel-mir-37	118131.00	118131.00	676208.96
+cel-miR-38	2123.00	cel-mir-38	2123.00	2123.00	12152.54
+cel-miR-39	2994.00	cel-mir-39	2994.00	2994.00	17138.34
+cel-miR-40	32878.00	cel-mir-40	32878.00	32878.00	188201.22
+cel-miR-41	87.00	cel-mir-41	87.00	87.00	498.01
diff -r 000000000000 -r 2c039fc73f1f test-data/precursors_ref_this_species.fa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/precursors_ref_this_species.fa	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,14 @@
+>cel-mir-36
+CACCGCTGTCGGGGAACCGCGCCAATTTTCGCTTCAGTGCTAGACCATCCAAAGTGTCTATCACCGGGTGAAAATTCGCATGGGTCCCCGACGCGGA
+>cel-mir-37
+TTCTAGAAACCCTTGGACCAGTGTGGGTGTCCGTTGCGGTGCTACATTCTCTAATCTGTATCACCGGGTGAACACTTGCAGTGGTCCTCGTGGTTTCT
+>cel-mir-38
+TCTGTGAGCCAGGTCCTGTTCCGGTTTTTTCCGTGGTGATAACGCATCCAAAAGTCTCTATCACCGGGAGAAAAACTGGAGTAGGACCTGTGACTCAT
+>cel-mir-39
+TATACCGAGAGCCCAGCTGATTTCGTCTTGGTAATAAGCTCGTCATTGAGATTATCACCGGGTGTAAATCAGCTTGGCTCTGGTGTC
+>cel-mir-40
+TCCTGTCCGCACCTCAGTGGATGTATGCCATGATGATAAGATATCAGAAATCCTATCACCGGGTGTACATCAGCTAAGGTGCGGGTACAGGT
+>cel-mir-41
+GGGTCCCAGAGACCTTGGTGGTTTTTCTCTGCAGTGATAGATACTTCTAACAACTCGCTATCACCGGGTGAAAAATCACCTAGGTCTGGAGCCTCCT
+>cel-mir-229
+CGCCGGCAATGACACTGGTTATCTTTTCCATCGTGGAATGCCCCCCATTGATTTTTTCCCCTTTTCGGGGGGAAAAAATTGGAAACGAGAAAGGTATCGGGTGTCATAGCCGGCG
diff -r 000000000000 -r 2c039fc73f1f test-data/reads_collapsed.fa
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/reads_collapsed.fa	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,3220 @@
+>seq_0_x149538
+TCACCGGGTGGAAACTAGCAGT
+>seq_149538_x90904
+TCACCGGGTGAACACTTGCAGT
+>seq_240442_x25577
+TCACCGGGTGTACATCAGCTAA
+>seq_266019_x11571
+TCACCGGGTGAAAATTCGCATG
+>seq_277590_x9943
+TCACCGGGTGGAAACTAGCAG
+>seq_287533_x5429
+TCACCGGGTGGAAACTAGCAGTT
+>seq_292962_x4000
+AATGACACTGGTTATCTTTTCCATCG
+>seq_296962_x3796
+TCACCGGGTGAACACTTGCAG
+>seq_300758_x2851
+TCACCGGGTGAACACTTGCAGTT
+>seq_303609_x2808
+TCACCGGGGGGAAACTAGCAGT
+>seq_306417_x2793
+TCACAGGGTGGAAACTAGCAGT
+>seq_309210_x2159
+TCACCGGGTGGAAACTAGCAGTA
+>seq_311369_x2128
+TCACCGGGTGTAAATCAGCTTG
+>seq_313497_x2021
+TCACCGGGTGGAAACTAGCA
+>seq_315518_x1866
+TCACCGGGCGGAAACTAGCAGT
+>seq_317384_x1629
+TCACCGGGAGGAAACTAGCAGT
+>seq_319013_x1597
+TCACAGGGTGAACACTTGCAGT
+>seq_320610_x1349
+TCACCGGGAGAAAAACTGGAGT
+>seq_321959_x1326
+TCACCGGGTGGAAAATAGCAGT
+>seq_323285_x1320
+TCACCGGGGGAACACTTGCAGT
+>seq_324605_x1295
+TCACCGGGTGGANACTAGCAGT
+>seq_325900_x1251
+TCACCGGGTGAACACTTGCAGTA
+>seq_327151_x1237
+TCACCGGGTGAACACTTGCA
+>seq_328388_x1017
+TCACCGGGTGTACATCAGCTA
+>seq_329405_x990
+ACCGGGTGGAAACTAGCAGT
+>seq_330395_x911
+TCACCGGGTGAANACTTGCAGT
+>seq_331306_x853
+TCACCGGGCGAACACTTGCAGT
+>seq_332159_x841
+TCACCGGGAGAACACTTGCAGT
+>seq_333000_x757
+TCACCGCGTGGAAACTAGCAGT
+>seq_333757_x746
+ACCGGGTGAACACTTGCAGT
+>seq_334503_x690
+TCACCGGGTGGAAACTAGCAGC
+>seq_335193_x686
+TCACCGGGTGAAAACTTGCAGT
+>seq_335879_x674
+TCACCGCGTGAACACTTGCAGT
+>seq_336553_x669
+TCACCGGGTGGAAACTAGCAGA
+>seq_337222_x632
+AGCTGATTTCGTCTTGGTAATA
+>seq_337854_x604
+TCAACGGGTGGAAACTAGCAGT
+>seq_338458_x598
+TCACCGGGTGGAAACTATCAGT
+>seq_339056_x557
+TCACCGGGTGGAAACTAGCAGG
+>seq_339613_x541
+TCACCGGGTGTACATCAGCTAAA
+>seq_340154_x508
+TCACCGGGTGGACACTAGCAGT
+>seq_340662_x508
+TCACCGGGTGAACACTGGCAGT
+>seq_341170_x448
+TCACCGGGTGAACACTTTCAGT
+>seq_341618_x427
+TCACCGGGTGAACAATTGCAGT
+>seq_342045_x391
+TCACCGGGTGAACACTTGCCGT
+>seq_342436_x389
+TCACCGGGTGGAAACTTGCAGT
+>seq_342825_x384
+TCACAGGGTGTACATCAGCTAA
+>seq_343209_x360
+TCACCGGGTGAAAACTAGCAGT
+>seq_343569_x355
+TCACCGGGTGTACATCAGCTAAT
+>seq_343924_x352
+TCACCGGGTGCAAACTAGCAGT
+>seq_344276_x345
+TCACCGGGTGGAGACTAGCAGT
+>seq_344621_x340
+TCAACGGGTGAACACTTGCAGT
+>seq_344961_x338
+TCACCGGGTGTACATCAGCTAT
+>seq_345299_x327
+TCACCGGGTGAACACTTGCTGT
+>seq_345626_x322
+TCACCGGGTGGAAATTAGCAGT
+>seq_345948_x316
+TCACCGGGTGAAAATTCGCATT
+>seq_346264_x309
+TCACCGGGTGGAAACTAGCCGT
+>seq_346573_x304
+TCACCGGGTGGTAACTAGCAGT
+>seq_346877_x304
+TCACCGGGTGGAAACTAGCTGT
+>seq_347181_x298
+TCACAGGGTGAAAATTCGCATG
+>seq_347479_x287
+TAACCGGGTGGAAACTAGCAGT
+>seq_347766_x287
+TCACCGGGGGTACATCAGCTAA
+>seq_348053_x285
+CACCGGGTGAACACTTGCAGT
+>seq_348338_x283
+TCACCGGGTGGAAACTAGTAGT
+>seq_348621_x282
+TCACCGGGTGGAAACTCGCAGT
+>seq_348903_x271
+TCACCGGGTGCACATCAGCTAA
+>seq_349174_x270
+TCACCGGGTGAACACTTGCAGC
+>seq_349444_x269
+TCACCTGGTGGAAACTAGCAGT
+>seq_349713_x268
+TCACCGGGTGTANATCAGCTAA
+>seq_349981_x265
+TCACCGGGTTGAAACTAGCAGT
+>seq_350246_x264
+TCACCGGGTGGCAACTAGCAGT
+>seq_350510_x263
+TCACCGGGTGGAAACTAGAAGT
+>seq_350773_x263
+TCACCGGGTGGAAACTACCAGT
+>seq_351036_x251
+TCACCGGGGGAAAATTCGCATG
+>seq_351287_x247
+TCACCGGGTGGACATCAGCTAA
+>seq_351534_x242
+TCACCGGGTGAACACTTGCAGG
+>seq_351776_x240
+ACCGGGTGTACATCAGCTAA
+>seq_352016_x236
+TCACCGGGTGGAAACTAGNAGT
+>seq_352252_x230
+TCACCGGGAGAAAAACTGGAGTT
+>seq_352482_x229
+TCACCGGGTGAAAATTCGCAT
+>seq_352711_x226
+TCACCGGGTGAAGACTTGCAGT
+>seq_352937_x224
+TCACCGGGCGTACATCAGCTAA
+>seq_353161_x223
+TCACCGGGTGGAAACTNGCAGT
+>seq_353384_x221
+CACCGGGTGAACACTTGCAGTT
+>seq_353605_x219
+TCACCGGATGGAAACTAGCAGT
+>seq_353824_x217
+TCACCGGGTGGAAACTAGCATT
+>seq_354041_x214
+TAACCGGGTGAACACTTGCAGT
+>seq_354255_x214
+TCACCGGGTGTAAATCAGCTTT
+>seq_354469_x212
+TCACCGGGTTAACACTTGCAGT
+>seq_354681_x211
+TCAGCGGGTGGAAACTAGCAGT
+>seq_354892_x210
+TCACCGGGTGCACACTTGCAGT
+>seq_355102_x209
+TCACCGGCTGGAAACTAGCAGT
+>seq_355311_x207
+TCACCGGCTGAACACTTGCAGT
+>seq_355518_x204
+TTACCGGGTGGAAACTAGCAGT
+>seq_355722_x204
+TCATCGGGTGGAAACTAGCAGT
+>seq_355926_x199
+TCACCGGGTGTACATCATCTAA
+>seq_356125_x198
+TCACCGGGTGGGAACTAGCAGT
+>seq_356323_x196
+TCACCGGGTGAATACTTGCAGT
+>seq_356519_x194
+TCACCAGGTGGAAACTAGCAGT
+>seq_356713_x192
+GCACCGGGTGGAAACTAGCAGT
+>seq_356905_x190
+TCACCTGGTGAACACTTGCAGT
+>seq_357095_x189
+TCACAGGGTGGAAACTAGCAG
+>seq_357284_x187
+TCACCGGGTGAACACTTGCAGA
+>seq_357471_x183
+TGACCGGGTGGAAACTAGCAGT
+>seq_357654_x183
+TCACCGGGTGAACACCTGCAGT
+>seq_357837_x183
+TCACCGGGTGTACATCAGCT
+>seq_358020_x178
+TCACCGGGTGGAAACTAGCACT
+>seq_358198_x178
+ATCACCGGGTGAACACTTGCAGT
+>seq_358376_x178
+TCACCGGATGAACACTTGCAGT
+>seq_358554_x177
+TCACCGAGTGGAAACTAGCAGT
+>seq_358731_x174
+TCACCGGGTGAACACTAGCAGT
+>seq_358905_x171
+TCACCGGGTGGATACTAGCAGT
+>seq_359076_x170
+TCACCGGGTGAACACTCGCAGT
+>seq_359246_x169
+TCACTGGGTGGAAACTAGCAGT
+>seq_359415_x166
+TCACCGGGTGGAAACCAGCAGT
+>seq_359581_x164
+TCACCGGGTGGAATCTAGCAGT
+>seq_359745_x162
+TCACCGGGTGGACACTTGCAGT
+>seq_359907_x159
+TCACCGGGTGGAAACTGGCAGT
+>seq_360066_x159
+TCACCGGGAGTACATCAGCTAA
+>seq_360225_x157
+TCACCGGGCGAAAATTCGCATG
+>seq_360382_x156
+TCACCGGGTGGAAACTAACAGT
+>seq_360538_x155
+TCACCGGGTCGAAACTAGCAGT
+>seq_360693_x155
+TCACCGGGTGAACACTTGNAGT
+>seq_360848_x153
+TCACCGAGTGAACACTTGCAGT
+>seq_361001_x150
+TCACCGGGTGAACACTTCCAGT
+>seq_361151_x146
+CCACCGGGTGGAAACTAGCAGT
+>seq_361297_x146
+TCACCAGGTGAACACTTGCAGT
+>seq_361443_x144
+TCACCGGGGGGAAACTAGCAG
+>seq_361587_x144
+TCACCGGGAGAAAAACTGGAG
+>seq_361731_x143
+TCACCGGGAGAAAATTCGCATG
+>seq_361874_x141
+CACCGGGTGAACACTTGCAGTA
+>seq_362015_x141
+TNACCGGGTGGAAACTAGCAGT
+>seq_362156_x140
+TCACCGGGTGAACACTTGCACT
+>seq_362296_x138
+TCACCGGGTGAACACTTGCATT
+>seq_362434_x135
+TCACCGGGTGAACTCTTGCAGT
+>seq_362569_x133
+TCACCGGGTGAACACTTGTAGT
+>seq_362702_x132
+TCACCGGGTGTAAACTAGCAGT
+>seq_362834_x132
+TCACCGGGTGGAAACTAGCAAT
+>seq_362966_x132
+TCACCGGGTGGAAACTAGCAT
+>seq_363098_x131
+TCACCGGGTGGAAACTAGC
+>seq_363229_x131
+TCACCGGGTGGAAAGTAGCAGT
+>seq_363360_x131
+TCACCGGGTGAACACGTGCAGT
+>seq_363491_x129
+TCACCGTGTGGAAACTAGCAGT
+>seq_363620_x129
+TCACCGGGTGAACACTTACAGT
+>seq_363749_x128
+TCATCGGGTGAACACTTGCAGT
+>seq_363877_x122
+TCACCGGGTGAACACTNGCAGT
+>seq_363999_x122
+TCACCGGGTCAACACTTGCAGT
+>seq_364121_x117
+TCACCGGGAGGAAACTAGCAG
+>seq_364238_x115
+TCACCGCGTGTACATCAGCTAA
+>seq_364353_x115
+GCACCGGGTGAACACTTGCAGT
+>seq_364468_x114
+TCACCGTGTGAACACTTGCAGT
+>seq_364582_x111
+TCACCGGGCGGAAACTAGCAG
+>seq_364693_x111
+TCACCGGGTGGAAACGAGCAGT
+>seq_364804_x110
+TCACCGGGTGTACATAAGCTAA
+>seq_364914_x108
+TCACCGGTTGGAAACTAGCAGT
+>seq_365022_x107
+TTACCGGGTGAACACTTGCAGT
+>seq_365129_x106
+TCACTGGGTGAACACTTGCAGT
+>seq_365235_x104
+TCACCGGGTGAACACTTGAAGT
+>seq_365339_x104
+ACCGGGTGAAAATTCGCATG
+>seq_365443_x103
+TGACCGGGTGAACACTTGCAGT
+>seq_365546_x102
+CACCGGGTGGAAACTAGCAGT
+>seq_365648_x102
+TCACCGGGTGTACACTTGCAGT
+>seq_365750_x101
+TCACCGGGTAGAAACTAGCAGT
+>seq_365851_x101
+ACACCGGGTGGAAACTAGCAGT
+>seq_365952_x99
+AATCACCGGGTGGAAACTAGCAGT
+>seq_366051_x97
+TCACCGGGTGAACATTTGCAGT
+>seq_366148_x95
+TCACCGGGTGAAAATTAGCATG
+>seq_366243_x94
+TCACCGGTTGAACACTTGCAGT
+>seq_366337_x94
+TCACCGGGTGGAAAATAGCAG
+>seq_366431_x93
+CCACCGGGTGAACACTTGCAGT
+>seq_366524_x92
+TCACCGGGTAAACACTTGCAGT
+>seq_366616_x91
+TCACCGGGTGGANACTAGCAG
+>seq_366707_x90
+TCACCGGGTGTACATTAGCTAA
+>seq_366797_x89
+TCACCGGGTGTACATCAGCTAC
+>seq_366886_x88
+TCACCGGGTGGAAACTAG
+>seq_366974_x88
+TCACCGGGTGTAAATCAGCTT
+>seq_367062_x87
+AATCACCGGGTGAACACTTGCAGT
+>seq_367149_x86
+TCACCCGGTGGAAACTAGCAGT
+>seq_367235_x86
+TCAGCGGGTGAACACTTGCAGT
+>seq_367321_x85
+TCACCGGGTGGAACCTAGCAGT
+>seq_367406_x84
+TCACCGGGTGTACATCCGCTAA
+>seq_367490_x83
+TNACCGGGTGAACACTTGCAGT
+>seq_367573_x83
+TCACCGGGTGTACATCAGCTCA
+>seq_367656_x78
+TCACAGGGTGAACACTTGCAG
+>seq_367734_x78
+TCACCGGGTGAANATTCGCATG
+>seq_367812_x78
+TCCCCGGGTGGAAACTAGCAGT
+>seq_367890_x78
+TCACCGGGTGTAAATCAGCTAA
+>seq_367968_x76
+TGTGGGTGTCCGTTGCGGTGCTA
+>seq_368044_x74
+CACCGGGTGTACATCAGCTAA
+>seq_368118_x72
+TCACCGGGTGTACATCAGTTAA
+>seq_368190_x71
+ACACCGGGTGAACACTTGCAGT
+>seq_368261_x70
+TCACCGGGTGTACATCAGATAA
+>seq_368331_x70
+TCACCCGGTGAACACTTGCAGT
+>seq_368401_x69
+ACCGGGGGGAAACTAGCAGT
+>seq_368470_x69
+TCACCGGGTGTACATCACCTAA
+>seq_368539_x67
+ACCGGGTGGAAACTAGCAG
+>seq_368606_x67
+TCACCGGGTGAACACTTGCGGT
+>seq_368673_x66
+CTCACCGGGTGAACACTTGCAGT
+>seq_368739_x66
+TCACCGGGTGAAAATTCTCATG
+>seq_368805_x66
+TCACCGCGTGAAAATTCGCATG
+>seq_368871_x65
+TCAACGGGTGTACATCAGCTAA
+>seq_368936_x64
+TCACCGGGTGTACATCAGC
+>seq_369000_x64
+TCACCGGGTGGAAACTAGCGGT
+>seq_369064_x62
+TCACCGGGTGAACACTTGCAAT
+>seq_369126_x62
+TCACCGGGTGAACCCTTGCAGT
+>seq_369188_x61
+CTCACCGGGTGGAAACTAGCAGT
+>seq_369249_x61
+TCACCGGGTGACCACTTGCAGT
+>seq_369310_x61
+TCACCGGGTGTAGATCAGCTAA
+>seq_369371_x60
+TCACCGGGGGAACACTTGCAG
+>seq_369431_x59
+TCACCGGGTGTACTTCAGCTAA
+>seq_369490_x59
+TCAACGGGTGAAAATTCGCATG
+>seq_369549_x59
+TCACCGGGTGAACATCAGCTAA
+>seq_369608_x57
+TCACCGGGTGGAAACTAGCAGTG
+>seq_369665_x55
+TCACCGGGTGAACACATGCAGT
+>seq_369720_x53
+TCACCGGGTGTACATCAACTAA
+>seq_369773_x52
+TCACCGGGTGTATATCAGCTAA
+>seq_369825_x52
+AATCACCGGGTGTACATCAGCTAA
+>seq_369877_x52
+TCACCGGGTGTACATCTGCTAA
+>seq_369929_x51
+TCACCGGGTGGAAACTAGCAGTC
+>seq_369980_x50
+ACCCGGTGGAAACTAGCAGT
+>seq_370030_x50
+AGCTGATTTCGTCTTGGTAAT
+>seq_370080_x48
+TAACCGGGTGTACATCAGCTAA
+>seq_370128_x47
+TCACCGGGTGTACATCNGCTAA
+>seq_370175_x47
+TCACCGGGTGCAAATTCGCATG
+>seq_370222_x46
+TCACCGGGTGTACATCAGNTAA
+>seq_370268_x46
+TCACCGGGTGTACATCGGCTAA
+>seq_370314_x46
+ACCGGGCGGAAACTAGCAGT
+>seq_370360_x45
+TCACCGGGTGTACATCAGCTTA
+>seq_370405_x44
+TTACCGGGTGTACATCAGCTAA
+>seq_370449_x44
+ACCGGGTGAACACTTGCAG
+>seq_370493_x44
+TCGCCGGGTGGAAACTAGCAGT
+>seq_370537_x43
+TCACCGCGTGGAAACTAGCAG
+>seq_370580_x42
+TCACCGGGTTTACATCAGCTAA
+>seq_370622_x42
+GGTGGTTTTTCTCTGCAGTGATA
+>seq_370664_x41
+TCACCGGGCGAACACTTGCAG
+>seq_370705_x41
+TCACCGGGTGGAAACTATCAG
+>seq_370746_x41
+TCACAGGGTGGAAACTAGCA
+>seq_370787_x41
+TCACCGGGTGGAAACAAGCAGT
+>seq_370828_x40
+TCACCGGGTGGAAACTAGGAGT
+>seq_370868_x40
+TCACCGGGTGGAAGCTAGCAGT
+>seq_370908_x40
+TCACCGGGTGAACGCTTGCAGT
+>seq_370948_x40
+TCACCGGATGTACATCAGCTAA
+>seq_370988_x40
+TCACCGGCTGTACATCAGCTAA
+>seq_371028_x39
+TCACCGGNTGGAAACTAGCAGT
+>seq_371067_x39
+TCACCGGGTGAACAGTTGCAGT
+>seq_371106_x39
+TCACCGGGTGTACATCAGCTGA
+>seq_371145_x39
+TCAACGGGTGGAAACTAGCAG
+>seq_371184_x38
+TCACCGGNTGAACACTTGCAGT
+>seq_371222_x38
+TCACGGGGTGGAAACTAGCAGT
+>seq_371260_x37
+TCACCGGGTGAACACTTGGAGT
+>seq_371297_x37
+TCACCGGGGGGAAACTAGCA
+>seq_371334_x37
+CGCCAATTTTCGCTTCAGTGCTA
+>seq_371371_x37
+TCATCGGGTGTACATCAGCTAA
+>seq_371408_x36
+TCACCGGGTGAAAATTCGCATGT
+>seq_371444_x36
+TCCCCGGGTGAACACTTGCAGT
+>seq_371480_x36
+TCACCGGGTGAAAATTCGCAGG
+>seq_371516_x35
+ATCACCGGGTGGAAACTAGCAGT
+>seq_371551_x34
+TCACCTGGTGTACATCAGCTAA
+>seq_371585_x34
+ATCACCGGGTGTACATCAGCTAA
+>seq_371619_x34
+TCACCGGGTGAAAATTCGCATA
+>seq_371653_x34
+TCACTGGGTGTACATCAGCTAA
+>seq_371687_x34
+TCACCGGGTGGAAACTAGCAA
+>seq_371721_x34
+CACCGGGTGGAAACTAGCAGTT
+>seq_371755_x33
+ACCGGGTGTAAATCAGCTTG
+>seq_371788_x33
+ACCGGGCGAACACTTGCAGT
+>seq_371821_x33
+TCACCGGGAGAAAAACTGGAGC
+>seq_371854_x33
+TCTCCGGGTGGAAACTAGCAGT
+>seq_371887_x33
+TCACCGGGTGTAAATCAGCTTA
+>seq_371920_x33
+TCACCGGGAGAACACTTGCAG
+>seq_371953_x32
+ACCGGGTGGAAACTAGCAGTT
+>seq_371985_x32
+TCACCGAGTGTACATCAGCTAA
+>seq_372017_x32
+TCACCGGGTGGAAATTCGCATG
+>seq_372049_x31
+TCACCGGGTGAANACTTGCAG
+>seq_372080_x31
+TCACAGGGTGTAAATCAGCTTG
+>seq_372111_x31
+TCACCGGGTGTAAATCAGCTTGT
+>seq_372142_x31
+TCACCAGGTGTACATCAGCTAA
+>seq_372173_x31
+TCACCGGGTCTACATCAGCTAA
+>seq_372204_x30
+TCACCGGGTGGAAACTAGTAG
+>seq_372234_x30
+TCACCGGGTGAAAATTTGCATG
+>seq_372264_x30
+TCACAGGGTGTACATCAGCTA
+>seq_372294_x30
+TCACCGGGTGAACATTCGCATG
+>seq_372324_x29
+AGTGGATGTATGCCATGATGATA
+>seq_372353_x29
+ACCGGGTGAACACTTGCAGTT
+>seq_372382_x29
+TCACTGGGTGAAAATTCGCATG
+>seq_372411_x29
+TTACCGGGTGAAAATTCGCATG
+>seq_372440_x28
+TCACCGGGTGTACATCAGCTAAC
+>seq_372468_x28
+TCACCGGGTGATCACTTGCAGT
+>seq_372496_x27
+TCACCGGGGGTAAATCAGCTTG
+>seq_372523_x27
+TCACCGGGTGTACATCAG
+>seq_372550_x27
+TCACCGGGTGAAAATTCACATG
+>seq_372577_x27
+TCGCCGGGTGAACACTTGCAGT
+>seq_372604_x27
+TCACCGGGTGGAGACTAGCAG
+>seq_372631_x27
+TCACCGGGTGAAAAATCACCTA
+>seq_372658_x27
+TGACCGGGTGTACATCAGCTAA
+>seq_372685_x26
+TCACCGCGTGAACACTTGCAG
+>seq_372711_x26
+TCACCGGGTGGACACTAGCAG
+>seq_372737_x26
+TAACCGGGTGAAAATTCGCATG
+>seq_372763_x26
+TCACCGGGTGAGCACTTGCAGT
+>seq_372789_x26
+TCACCGGGTGTACAGCAGCTAA
+>seq_372815_x25
+TCACCGGGTGAACAATTGCAG
+>seq_372840_x25
+TCACCGGGTGTAAATTCGCATG
+>seq_372865_x25
+TCACCGGGCGGAAACTAGCA
+>seq_372890_x25
+TCACCGGGTGTACCTCAGCTAA
+>seq_372915_x25
+TCACCGGGTGAAAATTCGCA
+>seq_372940_x24
+TCACCGGGTGGAAACTCGCAG
+>seq_372964_x24
+TCACAGGGTGAACACTTGCA
+>seq_372988_x24
+TCACCGGGTGAACACTTGC
+>seq_373012_x24
+ACCGGGTGGAAACTAGCAGTA
+>seq_373036_x24
+TCACCGGGTGGTAACTAGCAG
+>seq_373060_x24
+TCACCGGGTGTACATCAGCGAA
+>seq_373084_x24
+TCACCGAGTGAAAATTCGCATG
+>seq_373108_x23
+TCACCGGGTGGANACTAGCA
+>seq_373131_x23
+CACCGGGTGAACACTTGCAG
+>seq_373154_x23
+TTCACCGGGTGAACACTTGCAG
+>seq_373177_x23
+TCACCTGGTGGAAACTAGCAG
+>seq_373200_x23
+TCACGGGGTGAACACTTGCAGT
+>seq_373223_x23
+ACCGGGTGAACACTTGCCGT
+>seq_373246_x22
+TCACCGGGTGTAAATCAGCT
+>seq_373268_x22
+TCACCGGGTGAACACTTGCAGTC
+>seq_373290_x22
+TCACCGGGAGAAAAACTGCAGT
+>seq_373312_x22
+TCACCGGGTGAAAATTCGCATC
+>seq_373334_x22
+TCACCGGGTGAAAATTNGCATG
+>seq_373356_x22
+TCACCGGGTGAAAATTCGCCTG
+>seq_373378_x22
+TCACCGGGTGAAAACTTGCAG
+>seq_373400_x22
+TCACCGGGTGCAAACTAGCAG
+>seq_373422_x21
+TCAGCGGGTGAAAATTCGCATG
+>seq_373443_x21
+TCACCAGGTGAAAATTCGCATG
+>seq_373464_x21
+TCACAGGGAGAAAAACTGGAGT
+>seq_373485_x21
+TCACCGGATGGAAACTAGCAG
+>seq_373506_x21
+ACCGGGTGAACACTTTCAGT
+>seq_373527_x21
+TNACCGGGTGTACATCAGCTAA
+>seq_373548_x20
+TCACCGGGTGAACACTTG
+>seq_373568_x20
+TCACCGGGTGGAAATTAGCAG
+>seq_373588_x20
+TCACCGGGTGAAAATTCGCTTG
+>seq_373608_x20
+NCACCGGGTGGAAACTAGCAGT
+>seq_373628_x20
+TCACCGGCTGAAAATTCGCATG
+>seq_373648_x20
+TCACCGGGAGAAAAACTGGAGTA
+>seq_373668_x20
+ATCACCGGGTGAACACTTGCAG
+>seq_373688_x20
+TCACCTGGTGAAAATTCGCATG
+>seq_373708_x20
+CCACCGGGTGTACATCAGCTAA
+>seq_373728_x19
+TCACCGGGAGTAAATCAGCTTG
+>seq_373747_x19
+TCACCGGGTGAACACTTGCAGTG
+>seq_373766_x19
+TCACCGGGTGCAAATCAGCTTG
+>seq_373785_x19
+TCACCGGGAGGAAACTAGCA
+>seq_373804_x19
+TCACCGGGTGAACACTTTCAG
+>seq_373823_x19
+TCACCGGATGAAAATTCGCATG
+>seq_373842_x19
+AATCACCGGGTGAAAATTCGCATG
+>seq_373861_x19
+TCACCGTGTGTACATCAGCTAA
+>seq_373880_x19
+AGCTGATTTCGTCTTGGTAATAT
+>seq_373899_x19
+TCACCGGGTGAAAATTCGAATG
+>seq_373918_x19
+CACCGGGTGTACATCAGCTAAA
+>seq_373937_x19
+TCACCGGCTGGAAACTAGCAG
+>seq_373956_x19
+TCACCGGGTGACAATTCGCATG
+>seq_373975_x18
+TCACCGGTTGTACATCAGCTAA
+>seq_373993_x18
+TCACCGGGTGGAAACTAGAAG
+>seq_374011_x18
+CACCGGGTGTACATCAGCTAAT
+>seq_374029_x18
+TCACCGGGTGGAAACTNGCAG
+>seq_374047_x18
+TCACCGGGAGAAAAACTGGTGT
+>seq_374065_x18
+TCACCGGGTGTACATCAGCTAAG
+>seq_374083_x18
+TCACCGGGAGAACACTTGCA
+>seq_374101_x18
+TCACCGGGTATACATCAGCTAA
+>seq_374119_x18
+TCACCGGGAGTACATCAGCTA
+>seq_374137_x18
+CACCGGGGGAACACTTGCAGT
+>seq_374155_x18
+TCACCGGGTGAAAATTCGTATG
+>seq_374173_x17
+TCAGCGGGTGTACATCAGCTAA
+>seq_374190_x17
+TCACCGGGCGTAAATCAGCTTG
+>seq_374207_x17
+TCACCGGGTGTAAATTAGCTTG
+>seq_374224_x17
+TCACCGGGTGAAATTTCGCATG
+>seq_374241_x17
+TCAGCGGGTGGAAACTAGCAG
+>seq_374258_x17
+TCACCGGGTGGAAACTAACAG
+>seq_374275_x17
+AGCTGATTTCGTCTTGGTAA
+>seq_374292_x17
+TCACCGGGAGAAAAACTGGAGA
+>seq_374309_x17
+TCACCGGGTGGAAACTAGCTG
+>seq_374326_x17
+AATCACCGGGTGGAAACTAGCAG
+>seq_374343_x16
+TGACCGGGTGGAAACTAGCAG
+>seq_374359_x16
+ACCGGGTGGAAACTAGCCGT
+>seq_374375_x16
+GCACCGGGTGTACATCAGCTAA
+>seq_374391_x16
+TCATCGGGTGAAAATTCGCATG
+>seq_374407_x16
+CACCGGGGGGAAACTAGCAGT
+>seq_374423_x16
+TCACCGGGTGGAAACTACCAG
+>seq_374439_x16
+TCACCGGGTGAAGATTCGCATG
+>seq_374455_x16
+TAACCGGGTGGAAACTAGCAG
+>seq_374471_x16
+CACCGGGTGAACACTTGCAGTG
+>seq_374487_x16
+CTCACCGGGTGTACATCAGCTAA
+>seq_374503_x16
+TCACCGGGTGAACACTTGCAT
+>seq_374519_x16
+GCACCGGGTGAAAATTCGCATG
+>seq_374535_x16
+ACCGGGTGAACACTTGCAGTA
+>seq_374551_x16
+ACCGGGGGAACACTTGCAGT
+>seq_374567_x15
+TCACCGGGNGGAAACTAGCAGT
+>seq_374582_x15
+ACCGGGAGGAAACTAGCAGT
+>seq_374597_x15
+TCACCGGGTGGAAAATAGCA
+>seq_374612_x15
+TCACCGGGTGTAAATCAGCTTC
+>seq_374627_x15
+TCANCGGGTGGAAACTAGCAGT
+>seq_374642_x15
+TCACCGGGTGGAAACTAGNAG
+>seq_374657_x15
+TCACCGGGTAAAAATTCGCATG
+>seq_374672_x15
+TCACCGGGTGTAAATAAGCTTG
+>seq_374687_x14
+TCACTGGGTGGAAACTAGCAG
+>seq_374701_x14
+TCACCGGGTGAAAATTGGCATG
+>seq_374715_x14
+TCACCGGGTGAAAACTTGCA
+>seq_374729_x14
+TCCCCGGGTGTACATCAGCTAA
+>seq_374743_x14
+TCACCGGGTGAAAATTCGNATG
+>seq_374757_x14
+TGACCGGGTGAAAATTCGCATG
+>seq_374771_x14
+TCACCGGGTGTACATCAGCAAA
+>seq_374785_x14
+TCACCGGGTGAACACTGGCAG
+>seq_374799_x14
+TCACCGGGTGGGAACTAGCAG
+>seq_374813_x14
+TGTGGGTGTCCGTTGCGGTGCT
+>seq_374827_x14
+TCACCGGGTGGCAACTAGCAG
+>seq_374841_x14
+TCACCGGGTGGAAATCAGCTTG
+>seq_374855_x14
+TCACCGGGTGGAAACTAGCAC
+>seq_374869_x13
+ACACCGGGTGTACATCAGCTAA
+>seq_374882_x13
+CACCGGGTGGAAACTAGCAG
+>seq_374895_x13
+TCACCGGGTGGAAACTAGCT
+>seq_374908_x13
+TCACCGGGTTAAAATTCGCATG
+>seq_374921_x13
+TCACCGGGTTGAAACTAGCAG
+>seq_374934_x13
+TCACCGGGTGTTCATCAGCTAA
+>seq_374947_x13
+CCACCGGGTGGAAACTAGCAG
+>seq_374960_x13
+TCATCGGGTGGAAACTAGCAG
+>seq_374973_x13
+ACCGGGTGGAAAATAGCAGT
+>seq_374986_x13
+TCACCGGGAGAAAAACTGGAGTAA
+>seq_374999_x13
+TCACCCGGTGTACATCAGCTAA
+>seq_375012_x13
+ACCGGGTGGAAACTAGCAGC
+>seq_375025_x13
+TCACCGGGTGATAATTCGCATG
+>seq_375038_x13
+TCACCGGGTGAAAATTCCCATG
+>seq_375051_x13
+TCACCGGGTGGAAAGTAGCAG
+>seq_375064_x12
+ACCCGGTGAACACTTGCAGT
+>seq_375076_x12
+ACCGGGAGAACACTTGCAGT
+>seq_375088_x12
+ATCACCGGGTGAAAATTCGCATG
+>seq_375100_x12
+TCACCGGGTGAGAATTCGCATG
+>seq_375112_x12
+TCACCGGGTCAAAATTCGCATG
+>seq_375124_x12
+TCACCGGGTGAAAATCCGCATG
+>seq_375136_x12
+TNACCGGGTGGAAACTAGCAG
+>seq_375148_x12
+TCACCGGGTGAACACTTGCTG
+>seq_375160_x12
+TCACCGGGAGAAAAATTGGAGT
+>seq_375172_x12
+TCACCGGGTGGAAACTAGCCG
+>seq_375184_x12
+TCACCGGGAGAAAAACTGGAGG
+>seq_375196_x12
+ATCACCGGGAGAAAAACTGGAGT
+>seq_375208_x12
+TCACCGGGTGTAAATCAGCTTGA
+>seq_375220_x11
+ACCGGGTGGAAACTAGCA
+>seq_375231_x11
+TCACCGGGTGTAAATCAGC
+>seq_375242_x11
+TCACCGGGCGAACACTTGCA
+>seq_375253_x11
+TGCTGGTTTCTTCCACAGTGGTA
+>seq_375264_x11
+TCACCGGGNGAACACTTGCAGT
+>seq_375275_x11
+TCACCGGGTGTCCATCAGCTAA
+>seq_375286_x11
+TCACCGGGTAGAAACTAGCAG
+>seq_375297_x11
+TCACCGGGTGAAAACTAGCAG
+>seq_375308_x11
+ACCGGGCGTACATCAGCTAA
+>seq_375319_x11
+TCACCGGGTGAACACCTGCAG
+>seq_375330_x11
+TCACCGGGTGAAAACTCGCATG
+>seq_375341_x11
+TCACCGGGGGTACATCAGCTA
+>seq_375352_x11
+TCACCGGGTGTACGTCAGCTAA
+>seq_375363_x11
+TCACCGGGTGTGCATCAGCTAA
+>seq_375374_x11
+TCACCGTGTGGAAACTAGCAG
+>seq_375385_x10
+TCACCCGGTGAAAATTCGCATG
+>seq_375395_x10
+ACCGGGAGAAAAACTGGAGT
+>seq_375405_x10
+CACCGGGTGGAAACTAGCAGTA
+>seq_375415_x10
+TCACCGGGTGTANATCAGCTTG
+>seq_375425_x10
+TCACCGGGTGGAAACTAGCG
+>seq_375435_x10
+TCACCGGGTGTACACCAGCTAA
+>seq_375445_x10
+TCACCGGGTGTACATCAGGTAA
+>seq_375455_x10
+AGCTGATTTCGTCTTGTTAATA
+>seq_375465_x10
+TCACCGGGTGAAACTTCGCATG
+>seq_375475_x10
+TCANCGGGTGAACACTTGCAGT
+>seq_375485_x10
+TCACCGGGTGAACTCTTGCAG
+>seq_375495_x10
+ATCACCGGGTGAAAAATCACCTA
+>seq_375505_x10
+TCACCGGGTGAACACTGGCA
+>seq_375515_x10
+TCACCGGGTGTAAATCATCTTG
+>seq_375525_x10
+TCACCGGGTGTACATCAGCCAA
+>seq_375535_x10
+TNACCGGGTGAAAATTCGCATG
+>seq_375545_x10
+TCACCGGGTGAAAATTCGCATGA
+>seq_375555_x10
+TCACCGGGTGAAAAGTCGCATG
+>seq_375565_x10
+TCAACGGGTGAACACTTGCAG
+>seq_375575_x10
+TCACCGGTTGAAAATTCGCATG
+>seq_375585_x10
+TCACCGGGTGGAAACTTGCAG
+>seq_375595_x10
+TCACCGGGTGGAAACTGGCAG
+>seq_375605_x10
+TCACCGCGTGGAAACTAGCA
+>seq_375615_x10
+CTATCACCGGGTGTACATCAGC
+>seq_375625_x10
+CTCACCGGGTGAAAATTCGCATG
+>seq_375635_x10
+TCACCGGGAGCAAAACTGGAGT
+>seq_375645_x10
+TCACNGGGTGAACACTTGCAGT
+>seq_375655_x10
+TCCCCGGGTGAAAATTCGCATG
+>seq_375665_x10
+TCACCGGGTGAAAAATCGCATG
+>seq_375675_x10
+TCACCGGGTGAACACTTGAAG
+>seq_375685_x9
+TCACCGGGTGAACACTTGCCG
+>seq_375694_x9
+GATACTTCTAACAACTCGCTA
+>seq_375703_x9
+GCACCGGGTGTAAATCAGCTTG
+>seq_375712_x9
+TCACCGGGTGGAAACTATCA
+>seq_375721_x9
+TCACCGCGTGAACACTTGCA
+>seq_375730_x9
+ACCGGGTGGAAACTAACAGT
+>seq_375739_x9
+TCACCGGNTGTACATCAGCTAA
+>seq_375748_x9
+TCACCGGGTGTAAATCCGCTTG
+>seq_375757_x9
+TCACCGGGTGGAACCTAGCAG
+>seq_375766_x9
+TCACNGGGTGGAAACTAGCAGT
+>seq_375775_x9
+TCACCGGGTGGATACTAGCAG
+>seq_375784_x9
+TCACCGGGTGTAAACTAGCAG
+>seq_375793_x9
+ACCGGGTGAAAACTTGCAGT
+>seq_375802_x9
+TCACCGGGTGAATACTTGCAG
+>seq_375811_x9
+ACCGGGTGAACACTTGCAGC
+>seq_375820_x9
+TCACCGGGTGTACATCAGCTAG
+>seq_375829_x9
+TCACCGGGAGAAAAAATGGAGT
+>seq_375838_x9
+NCACCGGGTGAACACTTGCAGT
+>seq_375847_x9
+TCACCGGGTGAAAATTCGCACG
+>seq_375856_x9
+ACCGGGTGGAAACTAGCAGA
+>seq_375865_x9
+CCACCGGGTGAAAATTCGCATG
+>seq_375874_x9
+TCACCGGGTGCACATCAGCTA
+>seq_375883_x9
+ACCGGGTGGAAACTAGCAGG
+>seq_375892_x9
+TCACCGTGTGAAAATTCGCATG
+>seq_375901_x9
+GCACCGGGTGGAAACTAGCAG
+>seq_375910_x8
+ACCGGGTGAACACTTGCAGA
+>seq_375918_x8
+TCACCGGGTGAAAATTCGCGTG
+>seq_375926_x8
+AGATGATTTCGTCTTGGTAATA
+>seq_375934_x8
+ACGCATCCAAAAGTCTCTA
+>seq_375942_x8
+TCACGGGGTGAAAATTCGCATG
+>seq_375950_x8
+TCAACGGGTGTAAATCAGCTTG
+>seq_375958_x8
+TCACCGGGTGAACACTTGCAC
+>seq_375966_x8
+TCACCGGGAGGAAAACTGGAGT
+>seq_375974_x8
+TCACCGGGTGGAAACCAGCAG
+>seq_375982_x8
+TCTCCGGGTGAACACTTGCAGT
+>seq_375990_x8
+TCGCCGGGTGTACATCAGCTAA
+>seq_375998_x8
+TCACCGGGTGAACACTTGTAG
+>seq_376006_x8
+ACCGGGTGAACACTTGCA
+>seq_376014_x8
+TCACCGGCTGAACACTTGCAG
+>seq_376022_x8
+TTACCGGGTGTAAATCAGCTTG
+>seq_376030_x8
+TCACCTGGTGAACACTTGCAG
+>seq_376038_x8
+TCACCGGGTGTAAATCACCTTG
+>seq_376046_x8
+TCACCGGGAGTAAAACTGGAGT
+>seq_376054_x8
+AGCTGATTTCGTCTTGGTA
+>seq_376062_x8
+CAACGGGTGAACACTTGCAGT
+>seq_376070_x8
+TCAACGGGTGGAAACTAGCA
+>seq_376078_x8
+TCACCGGGTGAAAATGCGCATG
+>seq_376086_x8
+TCACCGGGGGAACACTTGCA
+>seq_376094_x8
+TCACCGCGTGTAAATCAGCTTG
+>seq_376102_x8
+ACCGGGTGGGAACTAGCAGT
+>seq_376110_x8
+TCACCGGGTGGAAACTCGCA
+>seq_376118_x8
+ATCACCGGGTGAAAAATCACCT
+>seq_376126_x8
+CCGGGTGGAAACTAGCAGT
+>seq_376134_x7
+TCACTGGGTGAACACTTGCAG
+>seq_376141_x7
+TCACCGGGTGAAAAACTGGAGT
+>seq_376148_x7
+TCACCGGGTAAACACTTGCAG
+>seq_376155_x7
+TCACCCGGTGGAAACTAGCAG
+>seq_376162_x7
+CCACCGGGTGAACACTTGCAG
+>seq_376169_x7
+CACCGGGTGAAAACTTGCAGT
+>seq_376176_x7
+ACACCGGGTGAAAATTCGCATG
+>seq_376183_x7
+TCACCGGGTGAACACTTGNAG
+>seq_376190_x7
+TCACCGGGTGAACACTTCCAG
+>seq_376197_x7
+AGCTGTTTTCGTCTTGGTAATA
+>seq_376204_x7
+TCACCGGTTGGAAACTAGCAG
+>seq_376211_x7
+CACCGGGTGTACATCAGCTA
+>seq_376218_x7
+TCACCGGGTGGAAACTAGNA
+>seq_376225_x7
+TCACCGGGTGTANATCAGCTA
+>seq_376232_x7
+TTACCGGGTGGAAACTAGCAG
+>seq_376239_x7
+GCACCGGGTGAACACTTGCAG
+>seq_376246_x7
+TCACCGGGTGTACAACAGCTAA
+>seq_376253_x7
+ACCGGGTGGAAATTAGCAGT
+>seq_376260_x7
+TCACCGGGTGAAAATACGCATG
+>seq_376267_x7
+TCACCGGGTTAACACTTGCAG
+>seq_376274_x7
+TCACCGGGTGGAAACTANCAGT
+>seq_376281_x6
+TCACCGGGTGTAAATCAGCTGG
+>seq_376287_x6
+AGTGGATGTATGCCATGATGATAT
+>seq_376293_x6
+CACCGGGAGAACACTTGCAGT
+>seq_376299_x6
+TCACAGGGTGTACATCAGCT
+>seq_376305_x6
+ACCGGGTGGACATCAGCTAA
+>seq_376311_x6
+TCACCTGGTGTAAATCAGCTTG
+>seq_376317_x6
+ACACCGGGTGGAAACTAGCA
+>seq_376323_x6
+ACCGGGTGAAAAATCACCTA
+>seq_376329_x6
+TCACCGGGTGAACACTAGCAG
+>seq_376335_x6
+TCACCGGGTGTACATCATCTA
+>seq_376341_x6
+TCACCAGGTGGAAACTAGCAG
+>seq_376347_x6
+AGCTGATTTCGTCTTGGTAATAA
+>seq_376353_x6
+TCCCAACTATTATTCTCGGAT
+>seq_376359_x6
+TCGCCGGGTGAAAATTCGCATG
+>seq_376365_x6
+TCACCGAGTGAACACTTGCAG
+>seq_376371_x6
+TCACCGGGTGTACATGAGCTAA
+>seq_376377_x6
+AACGGGTGGAAACTAGCAGT
+>seq_376383_x6
+ACCGCGTGAACACTTGCAGT
+>seq_376389_x6
+AGCTGATTTCGTCTTTGTAATA
+>seq_376395_x6
+ATCACCGGGTGTACATCAGCTA
+>seq_376401_x6
+TCACCGGGAGAAAAACGGGAGT
+>seq_376407_x6
+TCACCGGGTGGAATCTAGCAG
+>seq_376413_x6
+TCACCGGGTGGTAACTAGCA
+>seq_376419_x6
+TCNCCGGGTGAACACTTGCAGT
+>seq_376425_x6
+TCCCCGGGTGGAAACTAGCAG
+>seq_376431_x6
+GAAAAGTGGAGCAGAACGAAAA
+>seq_376437_x6
+TCACCGGGTGAAAATTAGCAT
+>seq_376443_x6
+TCACCGAGTGGAAACTAGCAG
+>seq_376449_x6
+TCACCGGGTGTACATCAGCTTG
+>seq_376455_x6
+CAGCTGATTTCGTCTTGGTAATA
+>seq_376461_x6
+TCACCGGGCGTACATCAGCTA
+>seq_376467_x6
+TCACAGGGTGAAAATTCGCAT
+>seq_376473_x6
+ACCGGGTGAACACTTGAAGT
+>seq_376479_x6
+TCACCGGTTGTAAATCAGCTTG
+>seq_376485_x6
+TCACCGGGTGAATACTTGCA
+>seq_376491_x6
+ACCGGGGGGAAACTAGCAG
+>seq_376497_x6
+TCACCGGCTGGAAACTAGCA
+>seq_376503_x6
+TCACCGGGTGAAAATTCGCAAG
+>seq_376509_x6
+TAACCGGGTGAACACTTGCAG
+>seq_376515_x6
+TCACCGAGTGAACACTTGCA
+>seq_376521_x6
+TCACCAGGTGAACACTTGCAG
+>seq_376527_x6
+TCACCTGGTGGAAACTAGCA
+>seq_376533_x5
+TGTGGGTGTCCGTTGCGGTGCTT
+>seq_376538_x5
+TCACCGGGTGTAAATCAG
+>seq_376543_x5
+TCANCGGGTGTACATCAGCTAA
+>seq_376548_x5
+TCACCGGGTGAACACGTGCAG
+>seq_376553_x5
+TCACCGGGTGTAAATCGGCTTG
+>seq_376558_x5
+TCACCGGGTGAACATTTGCAG
+>seq_376563_x5
+TCACCGGGTGTAAATCAGCTTGG
+>seq_376568_x5
+ACCGGGTGAACACTTGCACT
+>seq_376573_x5
+TCACCGTGTGAACACTTGCAG
+>seq_376578_x5
+TCATCGGGTGAACACTTGCAG
+>seq_376583_x5
+CACCGGGCGAACACTTGCAGT
+>seq_376588_x5
+ACCGGGTGGAAANTAGCAGT
+>seq_376593_x5
+TCACCGGGTGTACATCAGCTT
+>seq_376598_x5
+TCACCGGGTGGAAATTAGCA
+>seq_376603_x5
+ACCGGGTGGAAACTAGAAGT
+>seq_376608_x5
+TCTCCGGGTGTACATCAGCTAA
+>seq_376613_x5
+TCACCGGGTGGACACTAGCA
+>seq_376618_x5
+ACACCGGGTGAACACTTGCAG
+>seq_376623_x5
+TCACCGGGTGAAGACTTGCAG
+>seq_376628_x5
+TGACCGGGTGAACACTTGCAG
+>seq_376633_x5
+TCACCTGGTGAACACTTGCA
+>seq_376638_x5
+ACCGGGGGTACATCAGCTAA
+>seq_376643_x5
+ACCGGGTGGAAACTAGCACT
+>seq_376648_x5
+TCACCGGGTGCACACTTGCAG
+>seq_376653_x5
+TCACCGGGTGAATATTCGCATG
+>seq_376658_x5
+TGACCGGGTGAACACTTGCA
+>seq_376663_x5
+TAACCGGGAGAAAAACTGGAGT
+>seq_376668_x5
+TGCTGATTTCGTCTTGGTAATA
+>seq_376673_x5
+TCACCGGGAGAAAAACTCGAGT
+>seq_376678_x5
+TCACCGGGTGAACACTTGCT
+>seq_376683_x5
+TCACCGGGTGTAAATCAGATTG
+>seq_376688_x5
+TAACCGGGTGGAAACTAGCA
+>seq_376693_x5
+TCACCGGGAGAAAAACTGGACT
+>seq_376698_x5
+CACCGGGTGAACACTTGCAGC
+>seq_376703_x5
+TCACCGGCTGAACACTTGCA
+>seq_376708_x5
+AGCTGATTTCGTCTTGGGAATA
+>seq_376713_x5
+TCACCGGGTGTAAAGCAGCTTG
+>seq_376718_x5
+ACCGGGTGTACATCCGCTAA
+>seq_376723_x4
+TCACCGGGTGGAGACTAGCA
+>seq_376727_x4
+TCACCGGGTGGAAACTAGCC
+>seq_376731_x4
+TCGGGTGGAAACTAGCAGT
+>seq_376735_x4
+TCCCCGGGTGAACACTTGCAG
+>seq_376739_x4
+TCACGGGGTGGAAACTAGCAG
+>seq_376743_x4
+AGTTGATTTCGTCTTGGTAATA
+>seq_376747_x4
+ACCGGGTGGAAACTATCAGT
+>seq_376751_x4
+TCACCGGGTGGAAACTAGCAGTGC
+>seq_376755_x4
+TCACCGGGTGGAAACTAGCAGTAG
+>seq_376759_x4
+TCACCTGGAGAAAAACTGGAGT
+>seq_376763_x4
+TCACCGGGTGGANACTAGC
+>seq_376767_x4
+TCACCGGGTGAACACTTGCAGTGC
+>seq_376771_x4
+TCGCCGGGTGAACACTTGCA
+>seq_376775_x4
+ACCGGGTGGCAACTAGCAGT
+>seq_376779_x4
+TCACCTGGTGTACATCAGCTA
+>seq_376783_x4
+TCACCGAGTGTAAATCAGCTTG
+>seq_376787_x4
+ACCGGGTGTACATCAGCTAAA
+>seq_376791_x4
+TCACCNGGTGGAAACTAGCAGT
+>seq_376795_x4
+ACCGGGTCGAAACTAGCAGT
+>seq_376799_x4
+TCACCGGATGAACACTTGCAG
+>seq_376803_x4
+TCACCGGGTGGACACTTGCAG
+>seq_376807_x4
+ATCACCGGGGGAACACTTGCAGT
+>seq_376811_x4
+TCACAGGGTGTAAATCAGCTT
+>seq_376815_x4
+TCACCGGTTGAACACTTGCA
+>seq_376819_x4
+TCACCGGGTGAACACATGCAG
+>seq_376823_x4
+TCACCGGTTGAACACTTGCAG
+>seq_376827_x4
+TCACCGGGAGAAAAACTGGTG
+>seq_376831_x4
+ACCCGGTGTACATCAGCTAA
+>seq_376835_x4
+TCACCGGGTGAACACTTACA
+>seq_376839_x4
+ACCGGGTGAACANTTGCAGT
+>seq_376843_x4
+ACCGGGTGTACATCAGCTA
+>seq_376847_x4
+TCACCGGGTGTACACTTGCAG
+>seq_376851_x4
+ACCGGGTGGAAACTAGCTGT
+>seq_376855_x4
+TCACCGGGTGAAAAATCACCT
+>seq_376859_x4
+TCACCGAGTGGAAACTAGCA
+>seq_376863_x4
+TCACCGGGTGTAATTCAGCTTG
+>seq_376867_x4
+TCACCGGGAGAAAAACTTGAGT
+>seq_376871_x4
+TCAGCGGGAGAAAAACTGGAGT
+>seq_376875_x4
+TCACCGGGAGAAAAACTGTAGT
+>seq_376879_x4
+GGTGGTTTTTCTCTTCAGTGATA
+>seq_376883_x4
+GCACCGGGTGGAAACTAGCA
+>seq_376887_x4
+ACAGGGTGAACACTTGCAGT
+>seq_376891_x4
+TCACCGGGTGTACATCCGCTA
+>seq_376895_x4
+TACCGGGTGAACACTTGCAGT
+>seq_376899_x4
+TCACCGGGTGTAAACCAGCTTG
+>seq_376903_x4
+TCACCGGGTGTACATCAGATA
+>seq_376907_x4
+TCACCGGGAGAAAAACTGGA
+>seq_376911_x4
+TCACCGGGAGAAAAACTAGAGT
+>seq_376915_x4
+TCACCGGGTGTACATAAGCTA
+>seq_376919_x4
+ATCACCGGGTGAAAAATCACCTT
+>seq_376923_x4
+ACCGGGTGGTAACTAGCAGT
+>seq_376927_x4
+TCATCGGGTGTAAATCAGCTTG
+>seq_376931_x4
+ATCACCGGGAGAACACTTGCAGT
+>seq_376935_x4
+AGCTGATTTCGTCTTGGTAATT
+>seq_376939_x4
+TCACCGGGTGAACACTTTCA
+>seq_376943_x4
+ACCGGTTGGAAACTAGCAGT
+>seq_376947_x4
+TCACCAGGTGTAAATCAGCTTG
+>seq_376951_x4
+CTCACCGGGAGAAAAACTGGAGT
+>seq_376955_x4
+ACCGGGGGAAAATTCGCATG
+>seq_376959_x4
+TCACCGGGTGGAAACTAACA
+>seq_376963_x4
+AGCTGATTTCGTCTTGGCAATA
+>seq_376967_x4
+CGGGTGGAAACTAGCAGT
+>seq_376971_x4
+TATCACCGGGTGAACACTTGCAG
+>seq_376975_x4
+TCACCGGGTGTAAATCAGCGTG
+>seq_376979_x4
+ACCGGGTCAACACTTGCAGT
+>seq_376983_x4
+ATCACCGGGCGAACACTTGCAGT
+>seq_376987_x4
+TCACTGGGTGGAAACTAGCA
+>seq_376991_x4
+ACCGGGTGAACCCTTGCAGT
+>seq_376995_x4
+TCACCGGGTGTAAATCAGCTTGC
+>seq_376999_x4
+ACAGGGTGGAAACTAGCAGT
+>seq_377003_x4
+TCACCGGGTGAACAATTGCA
+>seq_377007_x3
+TCACTGGGTGTACATCAGCTA
+>seq_377010_x3
+ACCGCGTGGAAACTAGCAGT
+>seq_377013_x3
+TCACCGGGTGTACATCAGCAA
+>seq_377016_x3
+TCACCGGGTGGAAACTAGCGG
+>seq_377019_x3
+ACCGGGTGGAAACTACCAGT
+>seq_377022_x3
+AGCTGATTTCGTCTTGCTAATA
+>seq_377025_x3
+TCACCGGCTGTACATCAGCTA
+>seq_377028_x3
+TCACCGGGTGGCAACTAGCA
+>seq_377031_x3
+CCGGGTGAACACTTGCAGT
+>seq_377034_x3
+TCACCGGGTGACCACTTGCAG
+>seq_377037_x3
+AGCTGATTTTGTCTTGGTAATA
+>seq_377040_x3
+ACCGGGTGTACACTTGCAGT
+>seq_377043_x3
+TCACTGGGAGAAAAACTGGAGT
+>seq_377046_x3
+TCACCGGGTGGAAACTAGCAGTTG
+>seq_377049_x3
+TCACCGGGTGGAAACAAGCAG
+>seq_377052_x3
+TCACCGGGTGGAAANTAGCAGT
+>seq_377055_x3
+TCACCGGGTGTACATCAGNTA
+>seq_377058_x3
+TCTCCGGGTGGAAACTAGCAG
+>seq_377061_x3
+TCACCGGGAGAAAAACTGGAGCA
+>seq_377064_x3
+TCACCGGGGGAAAATTCGCAT
+>seq_377067_x3
+TCACCGGGGGGAAACTAGC
+>seq_377070_x3
+TCACCGGGTGAAAAATCACCTAT
+>seq_377073_x3
+ACCGGGTGAAAATTCGCAT
+>seq_377076_x3
+AATCACCGGGTGAACACTTGCAG
+>seq_377079_x3
+TCTCCGGGTGAACACTTGCAG
+>seq_377082_x3
+ATCACCGGGTGTAAATCAGCTTG
+>seq_377085_x3
+TCACCGCGAGAAAAACTGGAGT
+>seq_377088_x3
+TCACCGGGTGTAAATCTGCTTG
+>seq_377091_x3
+ACCGGGTGAACAATTGCAGT
+>seq_377094_x3
+TCACCGGGGGGAAACTAGCAGTG
+>seq_377097_x3
+CACCGGGTGGAAAATAGCAGT
+>seq_377100_x3
+CGGGTGAACACTTGCAGT
+>seq_377103_x3
+CACCGGGTGAACACTTGCTGT
+>seq_377106_x3
+AGCTGATTTAGTCTTGGTAATA
+>seq_377109_x3
+ACCGGGTGTACATCAGGTAA
+>seq_377112_x3
+TCCGGGTGGAAACTAGCAGT
+>seq_377115_x3
+CACCGGGAGGAAACTAGCAGT
+>seq_377118_x3
+ACTGGGTGAACACTTGCAGT
+>seq_377121_x3
+ACCGGGTGTACANCAGCTAA
+>seq_377124_x3
+NCACCGGGTGTACATCAGCTAA
+>seq_377127_x3
+TCACCGGGTGTAAATCAGCTA
+>seq_377130_x3
+ATCACCGGGTGGAAACTAGCAGC
+>seq_377133_x3
+ATCACCGGGTGAACACTTGCA
+>seq_377136_x3
+AGCTGATTTCGTCTTGGAAATA
+>seq_377139_x3
+CCACCGGGTGGAAACTAGCA
+>seq_377142_x3
+TCACCGGGTGTACATCAGTTA
+>seq_377145_x3
+TCACCGGGTGAANATTCGCAT
+>seq_377148_x3
+TCACCGGGTGGACATCAGCTA
+>seq_377151_x3
+TCACCGGGGGAAAAATCACCTA
+>seq_377154_x3
+AGCTGATTTCGTTTTGGTAATA
+>seq_377157_x3
+TCACCGGGTGAACACTTGCAGTGA
+>seq_377160_x3
+CACCGGGCGGAAACTAGCAGT
+>seq_377163_x3
+TCACCGGGTGAACATCAGCTA
+>seq_377166_x3
+ACCGAGTGGAAACTAGCAGT
+>seq_377169_x3
+TCACCGGGAGGAAAACTGGAG
+>seq_377172_x3
+TCACCGGGTGAAAATCAGCTTG
+>seq_377175_x3
+ACCGGGTGTACATCAGATAA
+>seq_377178_x3
+TNACCGGGAGAAAAACTGGAGT
+>seq_377181_x3
+TCACCGGGTGGAAACGAGCAG
+>seq_377184_x3
+TCACCGGGTGAACACTTCCA
+>seq_377187_x3
+AGCTAATTTCGTCTTGGTAATA
+>seq_377190_x3
+TTACCGGGTGAACACTTGCAG
+>seq_377193_x3
+TCACTGGGTGTAAATCAGCTTG
+>seq_377196_x3
+TCACCGGGAGAAAAACTGAAGT
+>seq_377199_x3
+TNACCGGGTGTAAATCAGCTTG
+>seq_377202_x3
+TCACCGGGTGAAAACTAGCA
+>seq_377205_x3
+ATCACCGGGTGAACACTTGCAGTT
+>seq_377208_x3
+TCATCGGGTGGAAACTAGCA
+>seq_377211_x3
+GTGTGGGTGTCCGTTGCGGTGCT
+>seq_377214_x3
+TCACCGGGAGAAAAACTGCAG
+>seq_377217_x3
+TCACCGGGTGAAAATTCGGATG
+>seq_377220_x3
+TCACCGCGTGTACATCAGCTA
+>seq_377223_x3
+ACCGGGTGGAAACTAGNAGT
+>seq_377226_x3
+TCACCGGGTGTAAACTAGCA
+>seq_377229_x3
+TCACCGGAAGAAAAACTGGAGT
+>seq_377232_x3
+TGCTGATTTCGTCTTGGTAAT
+>seq_377235_x3
+CACCGGGTGTAGATCAGCTAA
+>seq_377238_x3
+TCACCGGGTTAACACTTGCA
+>seq_377241_x3
+TCACCGGGTGAACTCTTGCA
+>seq_377244_x3
+AGCTGATTTCGTCTTGGTAATC
+>seq_377247_x3
+CACCGGGTGAAAATTCGCATG
+>seq_377250_x3
+ACCGGGTGAACACTTCCAGT
+>seq_377253_x3
+TCACCGGGTGAACACTCGCAG
+>seq_377256_x3
+AATCACCGGGTGTAAATCAGCTTG
+>seq_377259_x3
+ACCGGGAGAAAAACTGGAG
+>seq_377262_x3
+AGCTGATTTCGTCTTGGTATTA
+>seq_377265_x3
+ATCACCGGGTGAACACTTGCATT
+>seq_377268_x3
+TCACAGGGTGGAAACTAGCAGTG
+>seq_377271_x3
+TCACCGGGTGAACACTAGCA
+>seq_377274_x3
+ACCGGGTTAACACTTGCAGT
+>seq_377277_x3
+ACCGGGTGAACACTTGCAGG
+>seq_377280_x3
+CACCGGGTGAACACTTGCAGTC
+>seq_377283_x3
+TCACCGGGTGGAAACTAGCAGN
+>seq_377286_x3
+ACCGGGTGGAAAGTAGCAGT
+>seq_377289_x3
+CGCCAATTTTCGCTTCATTGCTA
+>seq_377292_x3
+TCACCGGGTGTACATCAGCTC
+>seq_377295_x3
+TCACCGGGTGAACAGTTGCA
+>seq_377298_x3
+ACCGGGTGTACATAAGCTAA
+>seq_377301_x3
+ACTGGGTGGAAACTAGCAGT
+>seq_377304_x3
+AGCTGATTTCGGCTTGGTAATA
+>seq_377307_x3
+TCACCGTGTGTAAATCAGCTTG
+>seq_377310_x3
+ACCGAGTGAACACTTGCAGT
+>seq_377313_x3
+TCACCNGGTGAACACTTGCAGT
+>seq_377316_x3
+CACCGGGTGAACACTTGCAGA
+>seq_377319_x3
+TCACCGGATGGAAACTAGCA
+>seq_377322_x3
+CTCACCGGGTGGAAACTAGCAG
+>seq_377325_x2
+CGCCAATTTTCGCTTCAGTGCT
+>seq_377327_x2
+TCACCGGGTGTAAATCAACTTG
+>seq_377329_x2
+CTCACCGGGTGTAAATCAGCTT
+>seq_377331_x2
+TCACCGGGAGAGAAACTGGAGT
+>seq_377333_x2
+TCACCGGGTGAACACGTGCA
+>seq_377335_x2
+ACCGGGTGGAAACTAGCATT
+>seq_377337_x2
+TNACCGGGTGAACACTTGCAG
+>seq_377339_x2
+TCACCGGGTGTAAATCAGCATG
+>seq_377341_x2
+ACCTGATTTCGTCTTGGTAATA
+>seq_377343_x2
+TCACAGGGTGAAAATTCGCA
+>seq_377345_x2
+TCACCGGGTGTAAATCAGTTTG
+>seq_377347_x2
+TCACCGGGTGGAAACTACCA
+>seq_377349_x2
+TCAGCGGGTGAACACTTGCA
+>seq_377351_x2
+TCACCGGGAGAAAAACTGGAC
+>seq_377353_x2
+CCGGGTGTACATCAGCTAA
+>seq_377355_x2
+CTCACCGGGTGAACACTTGCA
+>seq_377357_x2
+ACCGGGTGAAAATGCGCATG
+>seq_377359_x2
+AGCGGGTGTACATCAGCTAA
+>seq_377361_x2
+ACCGGGTGTACATCACCTAA
+>seq_377363_x2
+TCACCGGGTGCAAACTAGCA
+>seq_377365_x2
+ATCACCGGGTGAACACTTGCCGT
+>seq_377367_x2
+TCAACGGGTGAACACTTGCA
+>seq_377369_x2
+TCACCGGGAGAAAGACTGGAGT
+>seq_377371_x2
+ATCACCGGGTGTACATCAGCTAAA
+>seq_377373_x2
+TCACCGGGTGTACATCAGCTAAGT
+>seq_377375_x2
+ACCGGGTGGAAACCAGCAGT
+>seq_377377_x2
+TCACCAGGTGGAAACTAGCA
+>seq_377379_x2
+TCACCGGGTGAAAGTTCGCATG
+>seq_377381_x2
+TCACCGGGTGGAACCTAGCA
+>seq_377383_x2
+TCACCGGGTGTACATCAA
+>seq_377385_x2
+AGCTGATTTCGTCTTGGTCATA
+>seq_377387_x2
+TCACCGGGTGGAAACTAGTA
+>seq_377389_x2
+TCACCGGCTGTAAATCAGCTTG
+>seq_377391_x2
+ACCCGGTGGAAACTAGCA
+>seq_377393_x2
+GGTGGTTTTTCTCTGCCGTGATA
+>seq_377395_x2
+TCACCGGGAGAAAACCTGGAGT
+>seq_377397_x2
+ACCTGGTGAACACTTGCAGT
+>seq_377399_x2
+TCACCGGNTGGAAACTAGCAG
+>seq_377401_x2
+ACCGGGTGGAAACTCGCAGT
+>seq_377403_x2
+ACCGTGTGAACACTTGCAGT
+>seq_377405_x2
+TCACCGGGAGCAAAACTGGAG
+>seq_377407_x2
+ACCGGGTGAACACTGGCAGT
+>seq_377409_x2
+TCACCGGGTGAAGACTTGCA
+>seq_377411_x2
+ACCGGGAGTACATCAGCTAA
+>seq_377413_x2
+ATCACCGGGTGAACACTTGCAGTA
+>seq_377415_x2
+ACCGGGTGAACACTTGTAGT
+>seq_377417_x2
+ATCACCGGGTGTACATCAGCTAAT
+>seq_377419_x2
+TAACCGGGTGAACACTTGCA
+>seq_377421_x2
+TCACCGGATGTAAATCAGCTTG
+>seq_377423_x2
+TCACAGGGAGAAAAACTGGAG
+>seq_377425_x2
+TCACCGGCAGAAAAACTGGAG
+>seq_377427_x2
+TCACCGGGTGGAAAGTAGC
+>seq_377429_x2
+ACCGGGTGTACCTCAGCTAA
+>seq_377431_x2
+TCACCGGGTGAACACTTGCG
+>seq_377433_x2
+TCACCGTGTGAACACTTGCA
+>seq_377435_x2
+TGACCGGGTGTAAATCAGCTTG
+>seq_377437_x2
+ATCACCGGGTGGAAACTAGCAG
+>seq_377439_x2
+ACCGGGTGTACATCAGCTCA
+>seq_377441_x2
+ACCGGGTGAAAATTCTCATG
+>seq_377443_x2
+CACCGGGTGTACATCAGCTAAG
+>seq_377445_x2
+TCACCGGGTTTACATCAGCTA
+>seq_377447_x2
+TCACCGGGTGGAAACTAGCAGTGGCG
+>seq_377449_x2
+TCACTGGGTGAACACTTGCA
+>seq_377451_x2
+TCACCGGGTGAACACTTGCAGTGATC
+>seq_377453_x2
+ACCGGGTGTACATCAGCT
+>seq_377455_x2
+GGTGGTTTTTCTCTGCAGTGAT
+>seq_377457_x2
+GCACCGGGTGTACATCAGCTA
+>seq_377459_x2
+TCAGCGGGTGAACACTTGCAG
+>seq_377461_x2
+AGCTGAGTTCGTCTTGGTAATA
+>seq_377463_x2
+TCACCGGGTGAACACTTGGAG
+>seq_377465_x2
+TCACCGGGAGAANAACTGGAGT
+>seq_377467_x2
+TTACCGGGTGTACATCAGCTA
+>seq_377469_x2
+TCACCGGGTGGAAACTAGA
+>seq_377471_x2
+TCACCGGGTGTAGATCAGCTA
+>seq_377473_x2
+TCACCGGGAGAACAACTGGAGT
+>seq_377475_x2
+ACCGGGTAAACACTTGCAGT
+>seq_377477_x2
+ATCACCCGGTGAACACTTGCAGT
+>seq_377479_x2
+ACCGGGTGTAAATCAGCTTA
+>seq_377481_x2
+TCACCGGGTGGAAACTACC
+>seq_377483_x2
+TCACCGGGTAGAAACTAGCA
+>seq_377485_x2
+TCACCGGGTATAAATCAGCTTG
+>seq_377487_x2
+CACCGGGTGAACACTCGCAGT
+>seq_377489_x2
+TCACCGGGTGAACCCTTGCAG
+>seq_377491_x2
+ACCGGGTGTACATCAGCTAT
+>seq_377493_x2
+TCACCGGGTGTAACTCAGCTTG
+>seq_377495_x2
+TCACCGGGTCTAAATCAGCTTG
+>seq_377497_x2
+ACCGGGAGGAAACTAGCAG
+>seq_377499_x2
+CACCGGGTGTACATCAGCTAAC
+>seq_377501_x2
+GGTGGTTTTTCTCTGCAGTGCTA
+>seq_377503_x2
+AACGGGTGTACATCAGCTAA
+>seq_377505_x2
+CGCCAATTTTCGCTTCAGTGCTAT
+>seq_377507_x2
+CACCGGGTGAACACTTACAGT
+>seq_377509_x2
+TCNCCGGGTGTACATCAGCTAA
+>seq_377511_x2
+TCACCGGGTGAACACTTGCAA
+>seq_377513_x2
+TCACCGGATGAACACTTGCA
+>seq_377515_x2
+CACCGGGTGAAAAATCACCTA
+>seq_377517_x2
+TCACCGGGTGGAAACTCGC
+>seq_377519_x2
+TCACCGGGTGAAAAACTGGAG
+>seq_377521_x2
+ATCACCGGGTGAACACTTGCAGC
+>seq_377523_x2
+ACCGGGTGGAGACTAGCAGT
+>seq_377525_x2
+TCACCGGGTGGAAACTAGCAGTAGC
+>seq_377527_x2
+TTACCGGGAGAAAAACTGGAGT
+>seq_377529_x2
+ACCGGGTAGAAACTAGCAGT
+>seq_377531_x2
+TCACCGGGTGAAAATTCGCATGC
+>seq_377533_x2
+TCCCCGGGAGAAAAACTGGAGT
+>seq_377535_x2
+ACCGGGTGTAAACTAGCAGT
+>seq_377537_x2
+TCGCCGGGTGAACACTTGCAG
+>seq_377539_x2
+AGCTGGTTTCGTCTTGGTAATA
+>seq_377541_x2
+ANCGGGTGGAAACTAGCAGT
+>seq_377543_x2
+ATCGGGTGGAAACTAGCAGT
+>seq_377545_x2
+CGAAAAGGGGAGCAACGAAAAG
+>seq_377547_x2
+TCACCGGGTGGATACTAGCAGTG
+>seq_377549_x2
+TCATCGGGTGAACACTTGCA
+>seq_377551_x2
+ACCGGGTGAACACTAGCAGT
+>seq_377553_x2
+CAACGGGTGGAAACTAGCAGT
+>seq_377555_x2
+CCACCGGGAGAAAAACTGGAGT
+>seq_377557_x2
+ACCGGGTGTACATCTGCTAA
+>seq_377559_x2
+ATCACCGGGAGAAAAACTGGAGTT
+>seq_377561_x2
+TCACCGGGTGAAAATTGGCAT
+>seq_377563_x2
+AGTGGATGTATGCCATGATGAT
+>seq_377565_x2
+TCACAGGGTGGAAACTAGC
+>seq_377567_x2
+TCNCCGGGTGGAAACTAGCAGT
+>seq_377569_x2
+CACCGGGTGAACATCAGCTAA
+>seq_377571_x2
+CACCGGGGGTACATCAGCTAA
+>seq_377573_x2
+AGCTGATTTCGTCTTCGTAATA
+>seq_377575_x2
+TCACCGGGAGAAAAACTGGTGTA
+>seq_377577_x2
+ACCCGGTGAAAATTCGCATG
+>seq_377579_x2
+TACCGGGTGGAAACTAGCAGT
+>seq_377581_x2
+CTATCACCGGGTGTACATCAGCT
+>seq_377583_x2
+ACACCGGGTGGAAACTAGCAG
+>seq_377585_x2
+ACCGGGTGTAAATCAGCTTT
+>seq_377587_x2
+TCAGCGGGTGTAAATCAGCTTG
+>seq_377589_x2
+TCACCGGGTCAACACTTGCAG
+>seq_377591_x2
+TTCACCGGGTGGAAACTAGCAG
+>seq_377593_x2
+ACGAAAAGGAGATCTGGCACTG
+>seq_377595_x2
+TCACCGGGTTGAAACTAGCA
+>seq_377597_x2
+TTCACCGGGTGGAAACTAGCAGT
+>seq_377599_x2
+TCACAGGGTGTAAATCAGCT
+>seq_377601_x2
+ACCGGGTGAACACGTGCAGT
+>seq_377603_x2
+TCACCGGGTGTACATCATCT
+>seq_377605_x2
+TCACCGGGTGAACACTTGCAGTGGTTC
+>seq_377607_x2
+TCACCGGGTGAACACTTGCTGTG
+>seq_377609_x2
+TCACCGGGTGTACATCAGCGA
+>seq_377611_x2
+AGCGGGTGAACACTTGCAGT
+>seq_377613_x2
+ACCGGGCGGAAACTAGCAG
+>seq_377615_x2
+ACCGGGTGGACACTTGCAGT
+>seq_377617_x2
+TCACCGGCAGAAAAACTGGAGT
+>seq_377619_x2
+CACCGGGTGAAAAATCACCTAT
+>seq_377621_x2
+TCACCGGGAGAAAAACAGGAGT
+>seq_377623_x2
+TCACCGGGTGAAGACTTG
+>seq_377625_x2
+TCACCGGGCGAAAAACTGGAGT
+>seq_377627_x2
+ACCGGGTGAAAATTAGCATG
+>seq_377629_x2
+AGTGGATGGATGCCATGATGATA
+>seq_377631_x2
+GCCTCTACAAGTTGTGATCGT
+>seq_377633_x2
+ACCGGGTCAAAATTCGCATG
+>seq_377635_x2
+TCACCGGGTGTGAATCAGCTTG
+>seq_377637_x2
+AATCACCGGGTGTACATCAGCT
+>seq_377639_x2
+TCACCGGGTGGAAACTAGCAGTGAC
+>seq_377641_x2
+TCACCGGGTGATCACTTGCAG
+>seq_377643_x2
+TCACCGGGTGGAAGCTAGCAG
+>seq_377645_x2
+TCACCGGGTGTAAATCNGCTTG
+>seq_377647_x2
+AACGGGTGAACACTTGCAGT
+>seq_377649_x2
+TCACCGGGTGTAAGTCAGCTTG
+>seq_377651_x2
+TCACCGGGTGGAAACTAGCAGTGT
+>seq_377653_x2
+CACCGGGTGTAAATCAGCTTG
+>seq_377655_x2
+TCCCCGGGTGTAAATCAGCTTG
+>seq_377657_x2
+TCACCGGGTGGAAACTAGGAG
+>seq_377659_x2
+TCACCGGGTCGAAACTAGCAG
+>seq_377661_x2
+TCACCGGGTGTAGATCAGCTTG
+>seq_377663_x2
+CACCGGGTGAACACTTCCAGT
+>seq_377665_x2
+ACCGGGTGAAAACTAGCAGT
+>seq_377667_x2
+TCACCGGGTGGACATCAGCT
+>seq_377669_x2
+TCACCGGGTGTCAATCAGCTTG
+>seq_377671_x2
+GGTGGTTTTTCTCTGCAGTGATAAA
+>seq_377673_x2
+TCANCGGGTGAAAATTCGCATG
+>seq_377675_x2
+TCACGGGGTGTACATCAGCTAA
+>seq_377677_x2
+TCACCGGGTGAAAAATCACCTAA
+>seq_377679_x2
+ACCGGGAGAAAAACTGGAGTT
+>seq_377681_x2
+GCACCGGGAGAAAAACTGGAGT
+>seq_377683_x2
+TCACCGGGTGGAAACTAGT
+>seq_377685_x2
+ACCGGTTGAACACTTGCAGT
+>seq_377687_x2
+CACCGGGAGAAAAACTGGAGT
+>seq_377689_x2
+TCACCGAGAGAAAAACTGGAGT
+>seq_377691_x2
+ACCGGGTGGACACTAGCAGT
+>seq_377693_x2
+ACCGGGTGAAAATTCGCATT
+>seq_377695_x2
+ACCAGGTGAACACTTGCAGT
+>seq_377697_x2
+TCACCGGGTGGAAACTAGCAGTGCC
+>seq_377699_x2
+GGTGGTTTTTTTCTGCAGTGATA
+>seq_377701_x2
+TCACCGGGAGAAAAACNGGAGT
+>seq_377703_x2
+TCACCGGGTGTATATCAGCTA
+>seq_377705_x2
+TGGGGGTGTCCGTTGCGGTGCTA
+>seq_377707_x2
+TGACCGGGTGGAAACTAGCA
+>seq_377709_x2
+TCACCGGGCGGAAACTAG
+>seq_377711_x2
+TCGGGTGAACACTTGCAGT
+>seq_377713_x2
+TCACCGGGTGGAAACTAGAA
+>seq_377715_x2
+CACCGGGGGAAAATTCGCATG
+>seq_377717_x2
+TCGCCGGGTGGAAACTAGCAG
+>seq_377719_x2
+TCACCGGGGGAAAATTCGCA
+>seq_377721_x2
+TCACCGGGNGAAAATTCGCATG
+>seq_377723_x2
+AGCTGATTTCGTATTGGTAATA
+>seq_377725_x2
+TCACCGGGTGAACACTTGCAGTGG
+>seq_377727_x2
+TCACCGGGTGGAAACCAGCA
+>seq_377729_x2
+TCACCGGGGGTAAATCAGC
+>seq_377731_x2
+TCACCGGGAGAAAAACTGGCGT
+>seq_377733_x2
+ATCACCGGGTGAACACTTGAAGT
+>seq_377735_x2
+TCACCGGGTTAAAATTCGCAT
+>seq_377737_x2
+TCACCGGGTGAGCACTTGCAG
+>seq_377739_x2
+TTACCGGGTGAACACTTGCA
+>seq_377741_x2
+ATCACCGGGTGGAAACTAGCAGTT
+>seq_377743_x2
+TCACCGGGTGTACATCAACTA
+>seq_377745_x1
+ATCACCGGGTGAACACTTGCTGT
+>seq_377746_x1
+ACACCGGGTGTAAATCAGCTTG
+>seq_377747_x1
+GCACCGGGTGTAAATCAGCTT
+>seq_377748_x1
+TCACCGGGTGTACATCAGCTAAAG
+>seq_377749_x1
+CGCCGGGTGAACACTTGCAG
+>seq_377750_x1
+TCACCGGGTGACCACTTGCA
+>seq_377751_x1
+TCACCGGGTGGACATCAGC
+>seq_377752_x1
+CGAAAAGGGGAGCAACGAAAA
+>seq_377753_x1
+TCACCGGGTGTACATCACCTA
+>seq_377754_x1
+TCACCGGGTGAACACTTGTA
+>seq_377755_x1
+ACCGGGTGAACATTTGCAGT
+>seq_377756_x1
+CACCGGGTGGAAACTAGAAGT
+>seq_377757_x1
+AACGGGTGTAAATCAGCTTG
+>seq_377758_x1
+CCACCGGGTGGAAACTAGC
+>seq_377759_x1
+ATCACCGGGAGAAAAACTGGAG
+>seq_377760_x1
+AGGGGAGCAGAGCGAAAAG
+>seq_377761_x1
+TCACCGGGTGAACACTTNCA
+>seq_377762_x1
+TCACCGGGTGAACAGTTGCAG
+>seq_377763_x1
+TCACCGGGTGAANACTTGCA
+>seq_377764_x1
+TCACCGGGTGTACATCAGCTAAGC
+>seq_377765_x1
+ACCGGGTGTACATCAGCCAA
+>seq_377766_x1
+ACCGGGTGAACACTTACAGT
+>seq_377767_x1
+CACTGGGTGAAAATTCGCATG
+>seq_377768_x1
+TCACCGGNTGAACACTTGCAG
+>seq_377769_x1
+TCACCGGGTGTACATCAGCTG
+>seq_377770_x1
+CACCGGGTGACCACTTGCAGT
+>seq_377771_x1
+CGGGAGAAAAACTGGAGT
+>seq_377772_x1
+ACGGTATCCGGTCTCGACA
+>seq_377773_x1
+TCACCGGGTGGAAACTAGCAGTGG
+>seq_377774_x1
+ACCAGGTGGAAACTAGCAGT
+>seq_377775_x1
+ACCGGTTGAACACTTGCAG
+>seq_377776_x1
+CACCGGGTGGAAACTAGCA
+>seq_377777_x1
+CACCGGGTGAACACTTGCAGTTG
+>seq_377778_x1
+TCACCGGGTGGAAATTAG
+>seq_377779_x1
+TTCACCGGGTGAAAATTCGCATG
+>seq_377780_x1
+ACCCGGTGAACACTTGCAG
+>seq_377781_x1
+ATCACCGGGTGAACACTTGCGGT
+>seq_377782_x1
+ACCGGGTGGGAACTAGCA
+>seq_377783_x1
+CACCGGGTGGAAACTAGCATT
+>seq_377784_x1
+TCACCGGGTGAAAATTCTCAT
+>seq_377785_x1
+TCACCGGGTATACATCAGCTA
+>seq_377786_x1
+CACCGGGTGAACACTTGCAGTGC
+>seq_377787_x1
+GGGAGCAGAACGAAAAGGG
+>seq_377788_x1
+TCACCGGGTGTAAATCAGCCT
+>seq_377789_x1
+CACCGGGTGAACACGTGCAGT
+>seq_377790_x1
+TCACCGGGTGGGAACTAGC
+>seq_377791_x1
+TCACCGGTTGTACATCAG
+>seq_377792_x1
+ATCAACGGGTGTACATCAGCTAA
+>seq_377793_x1
+TCAACGGGTGTACATCAGCTA
+>seq_377794_x1
+CGGGAGAAAAACTGGAGTT
+>seq_377795_x1
+CCGGGTGAACACTTGCAG
+>seq_377796_x1
+TCACCGGGTGAACACTTT
+>seq_377797_x1
+CCCCGGGTGAACACTTGCAGT
+>seq_377798_x1
+CTCTACAAGTTGTGATCGTGAG
+>seq_377799_x1
+CGACAATTTTCGCTTCAGTGCTA
+>seq_377800_x1
+TCACCGGGTCGAAACTAGCAGTG
+>seq_377801_x1
+CACCGGGTGAAACTTCGCATG
+>seq_377802_x1
+CACGGGGTGAACACTTGCAGT
+>seq_377803_x1
+AGCTGATTTCGTGTTGGTAATA
+>seq_377804_x1
+ATCAACGGGTGAACACTTGCAGT
+>seq_377805_x1
+AAAAAGGGGATCTGTGAAAAGGGGAG
+>seq_377806_x1
+TCACCGGGTGTACAGCAGCTA
+>seq_377807_x1
+NCACCGGGTGGAAACTAGCA
+>seq_377808_x1
+AGCGGGTGGAAACTAGCAGT
+>seq_377809_x1
+TCACCCGGTGAACACTTGCAG
+>seq_377810_x1
+ACCGGGTGAACACTTGCAGTTG
+>seq_377811_x1
+TGTGGGTGTCAGTTGCGGTGCTA
+>seq_377812_x1
+TCACCGTGTGAACACTTG
+>seq_377813_x1
+CGAAAAGGGGATCTGCAAAAATG
+>seq_377814_x1
+TCACCGGGTGTACATCAGGT
+>seq_377815_x1
+TCGCCGGGTGGAAACTAGCA
+>seq_377816_x1
+TCACCGGGATAAAAACTGGAGT
+>seq_377817_x1
+AGCTGATTTCATCTTGGTAATA
+>seq_377818_x1
+ATCACCGGGAGAAAAACTGGAGTAA
+>seq_377819_x1
+TCACCGGGTGGAAACTAGCAGTCGCTC
+>seq_377820_x1
+ACCGGGTGGAAACTTGCAGT
+>seq_377821_x1
+ACCGCGTGTACATCAGCTAA
+>seq_377822_x1
+TCACCGCGTGTAAATCAGCTT
+>seq_377823_x1
+ACCGGGTGAACACTTGCCG
+>seq_377824_x1
+CACCGGGTGAACACTTGCAGTGT
+>seq_377825_x1
+TCACCGGGTGTTAATCAGCTTG
+>seq_377826_x1
+TCACCGGGTGGGAACTAGCA
+>seq_377827_x1
+TTCACCGGGTGAACACTTGCAGT
+>seq_377828_x1
+CACCGGGTGAAGACTTGCAGT
+>seq_377829_x1
+ATCACCGGGTGAACCCTTGCAGT
+>seq_377830_x1
+AGTGGATGTATGCCATGTTGATA
+>seq_377831_x1
+GGCTTTGAAGAGTACTGTAATTT
+>seq_377832_x1
+AGCTGATTTCGTGTTGGTAATAA
+>seq_377833_x1
+GGTGGTCTTTCTCTGCAGTGATA
+>seq_377834_x1
+TCACCGGGTGAAAACTTG
+>seq_377835_x1
+ACCGGGTGTAAATCAGCTTGTC
+>seq_377836_x1
+TCACCGGGCGGAAACTAGC
+>seq_377837_x1
+CCCGGGTGGAAACTAGCAGT
+>seq_377838_x1
+ATCACCGGGTGAACACGTGCA
+>seq_377839_x1
+GGGATCTGGCACCGTGCC
+>seq_377840_x1
+ATCACCGGGAGAACAACTGGAGT
+>seq_377841_x1
+CGAAAAGGGGAGCAACGAAAAGG
+>seq_377842_x1
+GTTTTGATCGTGAGGCCCCTTC
+>seq_377843_x1
+TCACCGGGTGTACATCTGCTA
+>seq_377844_x1
+CNCCGGGTGAACACTTGCAGT
+>seq_377845_x1
+TAACCGGGTGTACATCAGCTA
+>seq_377846_x1
+AGTGGATGTATTCCATGATGATA
+>seq_377847_x1
+TTACCGGGTGAAAAATCACCTA
+>seq_377848_x1
+TCACCGGGTCAACACTTGCA
+>seq_377849_x1
+ACCGGGTGCACACTTGCAGT
+>seq_377850_x1
+TCACCGGGTGCAAAATCACCTA
+>seq_377851_x1
+TCAGCGGGTGTAAATCAGC
+>seq_377852_x1
+TCACCGGGTGGANACTAG
+>seq_377853_x1
+TCAACGGGTGAACACTTGCAGTG
+>seq_377854_x1
+CACCGGGTGAACACNTGCAGT
+>seq_377855_x1
+ACCGGGCGAAAAATCACCTA
+>seq_377856_x1
+TCACCGGGTGTACAGCAGCT
+>seq_377857_x1
+TCACCGGGGGTACATCAGCT
+>seq_377858_x1
+TCACCGGGTGGAAACTAGCAGAGG
+>seq_377859_x1
+ATCACCGGGTGGAAAATAGCAGT
+>seq_377860_x1
+TCACCGGGTGAACACTTGCAGTGGT
+>seq_377861_x1
+ACCGGGTGTACATCATCTAA
+>seq_377862_x1
+TCACCGGGAGAAAAAGTGGAG
+>seq_377863_x1
+TCACCAGGTGAACACTTGCA
+>seq_377864_x1
+AGTGGAGCAGAACGAAAA
+>seq_377865_x1
+TCACCGGGTGGAAACTAGNAGTG
+>seq_377866_x1
+TCACCGTGTGAAAATTCGCAT
+>seq_377867_x1
+CACCGGGTGGGAACTAGCAG
+>seq_377868_x1
+TCACCGGGTGTACCTCAGC
+>seq_377869_x1
+TGCGCCTTTGAAGAGTACTGTA
+>seq_377870_x1
+ACCGGGAGAAAAACTGGAGA
+>seq_377871_x1
+TCACCGGGGGGAAACTAG
+>seq_377872_x1
+AGCGGGTGAACACTTGCAG
+>seq_377873_x1
+TCACCGGGAGAAATACTGGAG
+>seq_377874_x1
+ATCAACGGGTGGAAACTAGCAGT
+>seq_377875_x1
+AGCAGAACGAAAAGGGGGTCTG
+>seq_377876_x1
+TCACCGGGTGGAAANTAGCAG
+>seq_377877_x1
+TCACCGGGGGTACATCAGC
+>seq_377878_x1
+TGACCGGGAGAAAAACTGGAGT
+>seq_377879_x1
+TCATCGGGTGGAAACTAG
+>seq_377880_x1
+CCGATCACCGGGTGTACATCAGCT
+>seq_377881_x1
+GGTGGTTTTTCTCTTCAGTGA
+>seq_377882_x1
+TCACCGGGTGGAAACTAGCAGTGGA
+>seq_377883_x1
+TGTGGGTGTCCGTTGCGGTG
+>seq_377884_x1
+CCGGGTGAAAAATCACCTA
+>seq_377885_x1
+AGCTGATTTCGCCTTGGTAATA
+>seq_377886_x1
+TCCGGGTGAACACTTGCAGT
+>seq_377887_x1
+ATCACCGGGTGAACACTGGCAGT
+>seq_377888_x1
+TCACCGGGTGGACACTTGCA
+>seq_377889_x1
+CTCACCGGGTGGAAACTAGCA
+>seq_377890_x1
+ACCGGGTGTATATCAGCTAA
+>seq_377891_x1
+TCACCGGGTGTAAATCATCTT
+>seq_377892_x1
+ACCGGGTGAAAATTCGCA
+>seq_377893_x1
+TCACCGGGTGATAATTCGCA
+>seq_377894_x1
+TTTCAAAAAAAAAAAAAA
+>seq_377895_x1
+ACCGGGTGTACATCAGCTAAT
+>seq_377896_x1
+AGCTGCTTTCGTCTTGGTAA
+>seq_377897_x1
+TCACCGGGAGAAATACTGGAGT
+>seq_377898_x1
+AACTGATTTCGTCTTGGTAATA
+>seq_377899_x1
+TGTGGGTGTCCGGTGCGGTGCTA
+>seq_377900_x1
+TCACCGGGAGAAGAACTGGAGT
+>seq_377901_x1
+GCACCGGGTGGAAACTAGCAGTG
+>seq_377902_x1
+ACGGGTGGAAACTAGCAGT
+>seq_377903_x1
+GGTGGTTTTTCTCTGCAGTGATAG
+>seq_377904_x1
+CCCCGGGTGGAAACTAGCAGT
+>seq_377905_x1
+TGGTTTTTCTCTGCAGTGATA
+>seq_377906_x1
+TCACCGGGTGTAAATCAGCTTGGC
+>seq_377907_x1
+CAAAAAGGGGATCTGCGAAT
+>seq_377908_x1
+ACCGGGCGAACACTTGCA
+>seq_377909_x1
+TGTCACCGGGTGTAAATCAGCT
+>seq_377910_x1
+GCCACTTTTCGCTTCAGTGCTA
+>seq_377911_x1
+ATCACCGGGTGAACACTCGCAGT
+>seq_377912_x1
+TCACCGGGTGAAGACTTGC
+>seq_377913_x1
+TCACCCGGTGGAAACTAG
+>seq_377914_x1
+ATCACCGGGTGGAAACTAGAAGT
+>seq_377915_x1
+AATCACCGGGTGGAAACTAGC
+>seq_377916_x1
+CTATCACCGGGCGAAAATTCGCA
+>seq_377917_x1
+CACCGGGTGTACATCACCTAA
+>seq_377918_x1
+ACCGGGAGCAAAACTGGAGT
+>seq_377919_x1
+ACCGAGTGGAAACTAGCAG
+>seq_377920_x1
+TCACCAGGAGAAAAACTGGAGT
+>seq_377921_x1
+TCACCGGGAGAAAAANTGGAGT
+>seq_377922_x1
+ACGAAAAGGAGATCTGGCA
+>seq_377923_x1
+CACCAGGTGAACACTTGCAGT
+>seq_377924_x1
+AGCTGCTTTCGTCTTGGTAATA
+>seq_377925_x1
+TCACCGGGTGGNAACTAGCAGT
+>seq_377926_x1
+ATCACCGGGTGAATACTTGCAG
+>seq_377927_x1
+TCACCGGGTGAACACGTGCAGTG
+>seq_377928_x1
+TCAACGGGTGGAAACTAGC
+>seq_377929_x1
+TCACCGGGTGAAAATTCGTA
+>seq_377930_x1
+TCACCCGGTGTAAATCAGCTTG
+>seq_377931_x1
+TCACCGGGTCTACATCAGCTA
+>seq_377932_x1
+TCACCGGGTGGAAACTAGCAGTGGCT
+>seq_377933_x1
+TCACCGGGTGTAAATTCGCAT
+>seq_377934_x1
+GGGAGCAGAACGAAAAGG
+>seq_377935_x1
+ACCGGGTATACATCAGCTAA
+>seq_377936_x1
+ACCGGGTGGAAACTAGCAC
+>seq_377937_x1
+AGCCGATTTCGTCTTGGTAATA
+>seq_377938_x1
+CGCCGGGTGAACACTTGCAGT
+>seq_377939_x1
+TCACCGGGTGACCACTTG
+>seq_377940_x1
+TCACCGGGGGAAAAACTGGAGT
+>seq_377941_x1
+TCACCGGGTGGAATCTAGCA
+>seq_377942_x1
+TCACCGGGTGAAAAATAACCTA
+>seq_377943_x1
+TGTGGGTGTCCGTTGCTGTG
+>seq_377944_x1
+GAAAAGTGGAGCAGAACGAAA
+>seq_377945_x1
+GAAAAGGGGAGACACGAAAAGG
+>seq_377946_x1
+TTTCAAAAAACAACGTGCG
+>seq_377947_x1
+CACCTGGTGTACATCAGCTAA
+>seq_377948_x1
+ATCACCGGGTGAACACTTGCAT
+>seq_377949_x1
+ATCACCGGGTAAAAAATCACCT
+>seq_377950_x1
+ATCACCGGGTGGAAACTAGCAGTA
+>seq_377951_x1
+TCACCGGGTGAAAGATCACCTA
+>seq_377952_x1
+TCACCGGGTGAACACTTGAA
+>seq_377953_x1
+ACCGGGTGTACAGCAGCTAA
+>seq_377954_x1
+TGACCGGGTGTAAATCAGCTT
+>seq_377955_x1
+CGGGCGAACACTTGCAGT
+>seq_377956_x1
+ACCGGGTGCAAACTAGCAGT
+>seq_377957_x1
+CGCCAATTTTCGCTTCAGCGCTA
+>seq_377958_x1
+CACCGGGTGTAAATCAGCTTT
+>seq_377959_x1
+GAACTATCACCGGGTGGAAACTAGCAG
+>seq_377960_x1
+ACCGGGTGGAAACTAACAG
+>seq_377961_x1
+TCACCGGGTGAACACTTACAG
+>seq_377962_x1
+TCACCGGGAAAAAAACTGGAGT
+>seq_377963_x1
+ACCGGGTGGAAACTAGCAAT
+>seq_377964_x1
+CACCGGGTGAACACTTGCA
+>seq_377965_x1
+AACGGGTGGAAACTAGCAG
+>seq_377966_x1
+TNACCGGGTGAACACTTGCA
+>seq_377967_x1
+AAAGGGGAGCAGAACGAAAAGGG
+>seq_377968_x1
+GAAAAGCGGAGCAGAACGAAAA
+>seq_377969_x1
+ATCACCGGGTGAAAAATCACAT
+>seq_377970_x1
+TCACCGGGTGTAAATGAGCTTG
+>seq_377971_x1
+TCACTGGGTGTACATCAGC
+>seq_377972_x1
+ATCACCGGGTGAACACTTGCAGA
+>seq_377973_x1
+TCACCGGGTGAAAATTCGC
+>seq_377974_x1
+AGCTGATTTCGTCTTGGTCA
+>seq_377975_x1
+TCNCCGGGTGAACACTTGCAG
+>seq_377976_x1
+TCACCGGGTGAACAGTTGC
+>seq_377977_x1
+ATCACCGAGTGAACACTTGCAGT
+>seq_377978_x1
+TCACCAGGTGAAAAATCACCTA
+>seq_377979_x1
+TCACCGGGAGTAAATCAGCTT
+>seq_377980_x1
+ATCACCGGATGAACACTTGCAGT
+>seq_377981_x1
+TCACCGGGTGGACACTAGCAGTG
+>seq_377982_x1
+AGTGGATGTATGCCATGATGCTA
+>seq_377983_x1
+ACCGGGTGGAAACAAGCAGT
+>seq_377984_x1
+TCACCGGGTGTACATCAGTT
+>seq_377985_x1
+ACCGAGTGAAAATTCGCATG
+>seq_377986_x1
+TCACCGGGTGAACACTTGCAGTGTT
+>seq_377987_x1
+AAGGGGATCTGCGAGAAGGGG
+>seq_377988_x1
+CTCTGTGATCCAGGTCCTGT
+>seq_377989_x1
+TCTCACCGGGTGAAAATTCGCATG
+>seq_377990_x1
+TCACCGGGTGGACACTAGC
+>seq_377991_x1
+AGATGATTTCGTCTTGGTAAT
+>seq_377992_x1
+TCACCGGGTGAACACTTGCAGTTG
+>seq_377993_x1
+TCACCGGGAGAAACACTGGAGT
+>seq_377994_x1
+TGTGGGTGTCCGTTGCGG
+>seq_377995_x1
+GGTGGTTTTTCTCTGCAGTGATAT
+>seq_377996_x1
+ATCACCGCGTGAACACTTGCAGT
+>seq_377997_x1
+GGCTAGATCTTTTCCACT
+>seq_377998_x1
+GTTGTGATCGTGAGGCCCCTTC
+>seq_377999_x1
+TCACCGGGTGAACGCTTGCA
+>seq_378000_x1
+ATCACCGGGTGAACAATTGCAG
+>seq_378001_x1
+TCACCGGGTGAACACTTGCAGTGGCC
+>seq_378002_x1
+TCACCGGGTGTAAATCAGCCTG
+>seq_378003_x1
+TCACCGGGTGTCCATCAGCTA
+>seq_378004_x1
+TGTTGGTGTCCGTTGCGGTGCTA
+>seq_378005_x1
+AGTGGATGTATGCCATGAAGATA
+>seq_378006_x1
+CTATCACCGGGTGTACAGCAGCT
+>seq_378007_x1
+CACCGGGTCAACACTTGCAGT
+>seq_378008_x1
+CACCGGGTGAACACTAGCAGT
+>seq_378009_x1
+NCACCGGGTGGAAACTAGCAG
+>seq_378010_x1
+ACCGGGAGAAAAACTGGAGC
+>seq_378011_x1
+TCACCGGGAGAAAAACAGGAG
+>seq_378012_x1
+TCACCGGGTGTACATCATC
+>seq_378013_x1
+TCACCGGGTGTACTTCAGCTA
+>seq_378014_x1
+ACCGGGCGAACACTTGCAG
+>seq_378015_x1
+TCACCGGGTGTACACCAGCT
+>seq_378016_x1
+TGTTAAGCGTATCTTCTCGAA
+>seq_378017_x1
+TCACCGGGNGTACATCAGCTAA
+>seq_378018_x1
+TCACCGGGTGAACACTTGCAGTGGA
+>seq_378019_x1
+CACCGGATGAACACTTGCAGT
+>seq_378020_x1
+TCACCGGGTGAACACTTGCAGTAG
+>seq_378021_x1
+ACCGGGTGGAAGCTAGCA
+>seq_378022_x1
+TCACCGGGTGCACACTTGCA
+>seq_378023_x1
+ATCACCGGGTGTACATCATCTAA
+>seq_378024_x1
+ACCGGGTGAACACTTGCATT
+>seq_378025_x1
+ACCGGGTGAACACTTGGAGT
+>seq_378026_x1
+TCACCGGGTGCACATCAGCT
+>seq_378027_x1
+TGTGGGTGTCCGTTGTGGTGCTA
+>seq_378028_x1
+TCAACGGGAGAAAAACTGGAGT
+>seq_378029_x1
+TCACGGGGTGAACACTTGCAG
+>seq_378030_x1
+ACCGGATGAACACTTGCAGT
+>seq_378031_x1
+TCACCGGGAGAAAAACTGGGGT
+>seq_378032_x1
+TGGTTTTTCTCTGCAGTGATAGA
+>seq_378033_x1
+TCACCGGNTGTAAATCAGCTTG
+>seq_378034_x1
+TCACCGGGAGAAAAACTGGATT
+>seq_378035_x1
+TCACCGGGTGTAAATAAGC
+>seq_378036_x1
+TATCACCGGGTGAACACTTGCAGT
+>seq_378037_x1
+TAACCGGGTGAACACTTGCAGTG
+>seq_378038_x1
+ACCGGGTGAAAAATCGCATG
+>seq_378039_x1
+ATCACCGGCTGAACACTTGCAGT
+>seq_378040_x1
+GGGGAGCAGAACGAAAAGGGG
+>seq_378041_x1
+TCACCGGGTGTACATCAAC
+>seq_378042_x1
+AGCTGTTTTCGTCTTGGTAA
+>seq_378043_x1
+ACCGGGTGAACACCTGCAG
+>seq_378044_x1
+ATCACCGGGTGTACATCAG
+>seq_378045_x1
+CACCGGGTGTACNTCAGCTAA
+>seq_378046_x1
+ATCACCGGGAGTACATCAGCTAA
+>seq_378047_x1
+TCACCGGGTGAACCCTTGCA
+>seq_378048_x1
+TCACCGGNTGAACACTTGCA
+>seq_378049_x1
+TCACCGGGTGTACATAAGCT
+>seq_378050_x1
+ACCGGCTGAACACTTGCAGT
+>seq_378051_x1
+ACCGGGTGAACGCTTGCAGT
+>seq_378052_x1
+AGCTGATTTCGACTTGGTAATA
+>seq_378053_x1
+ACCGGGTGGAACCTAGCAGT
+>seq_378054_x1
+TCAACGGGTGGAAACTAG
+>seq_378055_x1
+ATCAACGGGTGAACACTTGCAG
+>seq_378056_x1
+ACCGGGCGTAAATCAGCTTG
+>seq_378057_x1
+TCACCGGGTGCACATCAGC
+>seq_378058_x1
+CAGGGTGTACATCAGCTAA
+>seq_378059_x1
+AGCTGACTTCGTCTTGGTAATA
+>seq_378060_x1
+AGTGGATGTATGCCATGATGATG
+>seq_378061_x1
+TCACCGGGTGTACATCAGCTAAGG
+>seq_378062_x1
+TCACCGGGCGAAAATTCGCA
+>seq_378063_x1
+TCACCGCGTGAAAATTCGCAT
+>seq_378064_x1
+TCATCGGGAGAAAAACTGGAGT
+>seq_378065_x1
+TCACCGGGTGCAAACTAGC
+>seq_378066_x1
+ACCGGGAGAAAAACTGAAGT
+>seq_378067_x1
+ACGGGGTGGAAACTAGCAGT
+>seq_378068_x1
+CGGGTGAAAAATCACCTA
+>seq_378069_x1
+TCACCGGGTGAACATCAGCT
+>seq_378070_x1
+CGGGTGAAAATTCGCATG
+>seq_378071_x1
+AGCTCGTCATTGAGATTA
+>seq_378072_x1
+TCACCGGGTGAACACTCGCA
+>seq_378073_x1
+TCACCGAGTGAAAAATCACCTA
+>seq_378074_x1
+TTCGCAAAAAAAAAAAAC
+>seq_378075_x1
+ATCGGGTGAACACTTGCAGT
+>seq_378076_x1
+TCACCGGGTCGAAACTAGCA
+>seq_378077_x1
+TCACCTGGTGTACATCAGCT
+>seq_378078_x1
+TCACCGGGTGAAAATTCACAT
+>seq_378079_x1
+ACCGGGTGTACATCAGCTAC
+>seq_378080_x1
+GGTGGTTTTTCTGTGCAGTGATAG
+>seq_378081_x1
+TCACCGGGAGAACAACTGGAG
+>seq_378082_x1
+ACCGGGTGAATACTTGCAGT
+>seq_378083_x1
+TAACCGGGTGAACACTTG
+>seq_378084_x1
+AGCTGATTTCGTCTTGGTTAT
+>seq_378085_x1
+TCACCGGGAGAAAAACTGNAGT
+>seq_378086_x1
+TCACCGGGTGTAAATCGGCTT
+>seq_378087_x1
+NCACCGGGTGTACATCAGCTA
+>seq_378088_x1
+ACCGGGCGAAAATTCGCATG
+>seq_378089_x1
+TCACCGGGTGGAAACTAC
+>seq_378090_x1
+TCACCGGGTGAAAACTAGC
+>seq_378091_x1
+TCACCGGGTCGAAACTAG
+>seq_378092_x1
+TCACCGGGTGAAAATTCGCAG
+>seq_378093_x1
+ACCGGGAGAAAAACGGGAGT
+>seq_378094_x1
+TCACCGGGTGAACACTTGCAGTGGTCA
+>seq_378095_x1
+ATATCACCGGGTGTACATCAGC
+>seq_378096_x1
+TCACCGGGTGTACATCNG
+>seq_378097_x1
+CCATCACCGGGTGTACATCAGCTAA
+>seq_378098_x1
+TCACCGGGTGAACACCTGCA
+>seq_378099_x1
+GGGGGTTTTTCTCTGCAGTGATA
+>seq_378100_x1
+TCACCGGGTGGAAACTAGCAATG
+>seq_378101_x1
+ACCGGGTGGATACTAGCAGT
+>seq_378102_x1
+TCACCGGGNGGAAACTAGCA
+>seq_378103_x1
+TCACCGGGTGTAAACCAGCTT
+>seq_378104_x1
+TCACCGGGAGCAAAACTGGAGTA
+>seq_378105_x1
+TCACCCGGTGAACACTTGCA
+>seq_378106_x1
+ACCGGGTGAAAATTCCCATG
+>seq_378107_x1
+TCACCGGGACAAAAACTGGAGT
+>seq_378108_x1
+CACCGGGTGAACACTTGCAGCG
+>seq_378109_x1
+TCACCGGGTGGAAACTAGCAGTGGT
+>seq_378110_x1
+TCACCGGGTGGAAAATAGCAGTG
+>seq_378111_x1
+AGGAGATCTGGCACTGTG
+>seq_378112_x1
+ATCACCGGTTGAACACTTGCAGT
+>seq_378113_x1
+TCACCGGGTGCAAATCAGCTT
+>seq_378114_x1
+TGTGGGTGTCCGTTGCGGTGCGA
+>seq_378115_x1
+TCANCGGGTGGAAACTAGCAG
+>seq_378116_x1
+TCACCGGGTGTATATCAGCTTG
+>seq_378117_x1
+TCANCGGGTGTAAATCAGCTTG
+>seq_378118_x1
+AGCTGATTTCGTCTTGTTAA
+>seq_378119_x1
+TTACCGGGTGGAAACTAGCA
+>seq_378120_x1
+TCACCGGGAGAAAAACTG
+>seq_378121_x1
+ACCGGNTGGAAACTAGCAGT
+>seq_378122_x1
+AGCACCGGGTGTACATCAGCTAA
+>seq_378123_x1
+TTACCGGGTGAACACTTGCAGTGGT
+>seq_378124_x1
+ACACCGGGTGAACACTTGCA
+>seq_378125_x1
+TGAGGGTGTCCGTTGCGGTGCTA
+>seq_378126_x1
+AGTGTGGGTGTCCGTTGCGGTGCTA
+>seq_378127_x1
+TATCACCGGGTGAACACTTGCA
+>seq_378128_x1
+GGGATCTGCGGAAAGGGGAGA
+>seq_378129_x1
+TGCGCCTTTAAAGAGTACTGTA
+>seq_378130_x1
+GGTGGTTTTTCTCTGCAGTGATT
+>seq_378131_x1
+TGTGGGTGTCCGTTGCGGTGAT
+>seq_378132_x1
+ACCGGGTGAACACATGCA
+>seq_378133_x1
+CTATCACCGGGTGTACATCAGCA
+>seq_378134_x1
+TCACCGGGTGAAAATTCNCATG
+>seq_378135_x1
+TCACCAGGTGTACATCAGCTA
+>seq_378136_x1
+TCAACGGGAGAAAAACTGGAG
+>seq_378137_x1
+TCACCGGNTGAAAATTCGCATG
+>seq_378138_x1
+ACCGTGTGTACATCAGCTAA
+>seq_378139_x1
+ACCGGGGGTAAATCAGCTTG
+>seq_378140_x1
+TCACCGGGAGAATAACTGGAG
+>seq_378141_x1
+AGTGGATGTATGCCATTATGATA
+>seq_378142_x1
+TCACCGGATGTACATCAGCTA
+>seq_378143_x1
+AAGCTGATTTCGTCTTGGTAAT
+>seq_378144_x1
+CACCGGGTGAACAATTGCAGT
+>seq_378145_x1
+GGGGATCTGCAAAAAGGG
+>seq_378146_x1
+TCGGGTGAACACTTGCAG
+>seq_378147_x1
+GGCTGGATTTTGTAAGCT
+>seq_378148_x1
+AAGAGAATAGAACCGACGATAT
+>seq_378149_x1
+NCCGGGTGTACATCAGCTAA
+>seq_378150_x1
+TGACCGGGTGAAAATTCGCAT
+>seq_378151_x1
+ACCGGGTGGGAACTAGCAG
+>seq_378152_x1
+TCACCGGGAGAAAAACTGGAGTTG
+>seq_378153_x1
+CTATCACCGGGTGTACATCAG
+>seq_378154_x1
+AGCTGATTTCGTCTTGGTAGTA
+>seq_378155_x1
+TCACCGGGTGTACTTCAGCT
+>seq_378156_x1
+ATCACCGGCAGAAAAACTGGAGT
+>seq_378157_x1
+ACCGGATGAAAATTCGCATG
+>seq_378158_x1
+ACCGGGTGAACACCTGCAGT
+>seq_378159_x1
+ACCGGGTGAAGACTTGCAGT
+>seq_378160_x1
+GGGTAGAGGACGACACTGCCA
+>seq_378161_x1
+TCTCACCGGGTGGAAACTAGCAGT
+>seq_378162_x1
+GGGAGACACGAAAAGGGGA
+>seq_378163_x1
+TGTGGGTCTCCGTTGCGGTGCTA
+>seq_378164_x1
+CCGGGTGTAAATCAGCTTA
+>seq_378165_x1
+TCACCGGGAGAAAAACTGGAGTG
+>seq_378166_x1
+ACCGGGTGTAAATCAGCTNG
+>seq_378167_x1
+TCACCGGGTGTAAATCAGCG
+>seq_378168_x1
+TCACCGGGTGTAAATCATC
+>seq_378169_x1
+CACCGGGTGAACATTTGCAG
+>seq_378170_x1
+TCACCGGGCGGAAACTAGCAGTG
+>seq_378171_x1
+ACCGGGTGGAAACGAGCAGT
+>seq_378172_x1
+ACAAGTTGTGATCGTGATGCC
+>seq_378173_x1
+TGTGGGTGTCCGTTGCGGCGCTA
+>seq_378174_x1
+ACCGGGTGGAAACTAGGAGT
+>seq_378175_x1
+TCACCGGGAGATAAACTGGAGT
+>seq_378176_x1
+AGTGGTTGTATGCCATGATGATA
+>seq_378177_x1
+CTATCACCGGGTGTACATCAGTT
+>seq_378178_x1
+AGCTGATTTCTTCTTGGTAATA
+>seq_378179_x1
+TCACCGGGTGAACACTTGCAGGG
+>seq_378180_x1
+TCACCGGGTGGAAACTAGCAGCG
+>seq_378181_x1
+ACCGGGTGGAAACTAGCAGTG
+>seq_378182_x1
+TCACCGGGTGGAAACGAGCA
+>seq_378183_x1
+TCACCGGGTGAAAAACTG
+>seq_378184_x1
+CACCGGGTGGAAACTAGCGGT
+>seq_378185_x1
+TCACCGGGAGTACATCAGCTAAG
+>seq_378186_x1
+TCACCGGGTGTAAAACAGCTT
+>seq_378187_x1
+ACCGGGAGAAAATTCGCATG
+>seq_378188_x1
+NCACCGGGTGAAAATTCGCATG
+>seq_378189_x1
+TCACCGGGGGAACACTTG
+>seq_378190_x1
+TACCGGGTGTACATCAGCTAA
+>seq_378191_x1
+ATCACCGGGTGANCACTTGCAGT
+>seq_378192_x1
+CTCACCGGGTGTAAATCAGCTTG
+>seq_378193_x1
+AAAAGGGGAGCTGGCACTGTG
+>seq_378194_x1
+ACCGGGTGGAAACTATCAG
+>seq_378195_x1
+CCACCGGGTGTACATCAGCTA
+>seq_378196_x1
+CACCGGGTGAACACTGGCAGT
+>seq_378197_x1
+TCACCGGGTGTACATCAGCTAAGGC
+>seq_378198_x1
+TCACCGGGCGTACATCAGCT
+>seq_378199_x1
+TCAGCGGGTGTACATCAGCTA
+>seq_378200_x1
+TCACCGGGCGTACATCAGC
+>seq_378201_x1
+TCACCGGGTGGAAACTAGCAGTCGC
+>seq_378202_x1
+ACACCGGGTGAACACTTG
+>seq_378203_x1
+TCACCGGGTTGAAACTAGCAGTG
+>seq_378204_x1
+TCACCGGGTGAAAATTCGCCT
+>seq_378205_x1
+CTTAGTCAATTCCTCAAC
+>seq_378206_x1
+ATGACCGGGTGAACACTTGCAGT
+>seq_378207_x1
+ATCACCGGGGGGAAACTAGCAGT
+>seq_378208_x1
+TGTGGGGGTCCGTTGCGGT
+>seq_378209_x1
+CCGGGTGGAAACTAGCAGTGGCT
+>seq_378210_x1
+TCACCGGGTGTANATCAGC
+>seq_378211_x1
+GAAAAGGGGAGCAGAACGAAGA
+>seq_378212_x1
+TCACCGGGAGAAAAAGTGGAGT
+>seq_378213_x1
+ATCACCCGGTGTACATCAGCTAA
+>seq_378214_x1
+GAAAAAAAAACCAAAAAA
+>seq_378215_x1
+TCACCGGGTGAACAATCACCTA
+>seq_378216_x1
+TGGTTTTTCTCTGCAGTGTTA
+>seq_378217_x1
+GCCAATTTTCGCTTCAATGCTA
+>seq_378218_x1
+GTGGATGTATGCCATGATGATAAGA
+>seq_378219_x1
+TCACCGGGTGTAAATCAGGTTG
+>seq_378220_x1
+TCACCGGGAGAAAAACTGGAGAA
+>seq_378221_x1
+TCACCGGGCGTAAATCAGCTT
+>seq_378222_x1
+AGCTAATTTCGTCTTGGTAATAA
+>seq_378223_x1
+ATCAACGGGTGAAAATTCGCATG
+>seq_378224_x1
+TCACCGGGTGATCACTTGCA
+>seq_378225_x1
+AACGAAAAGGGGATCTGGCACT
+>seq_378226_x1
+TCACCGGGAGACAAACTGGAGT
+>seq_378227_x1
+GGTGGTTTTTCTCTGTAGTGATA
+>seq_378228_x1
+ACCGGGTGGAAACTGGCAGT
+>seq_378229_x1
+TCACCGGGTGTAAATCAGCTTGGCG
+>seq_378230_x1
+ACCGGGTGGAAACTAGCCG
+>seq_378231_x1
+AGTGGATGTTTGCCATGATGATA
+>seq_378232_x1
+ATCACCGGGGGAACACTTGCAG
+>seq_378233_x1
+TCACCGGGTGTAAATTCGCA
+>seq_378234_x1
+TCACCGGGTGGAAACTNGCA
+>seq_378235_x1
+ACCGGGAGAACACTTGCAG
+>seq_378236_x1
+TGTGGGTGTCCGTTGAGGTGCT
+>seq_378237_x1
+ACGGGGTGTACATCAGCTAA
+>seq_378238_x1
+ACCGGGTGGAGACTAGCAG
+>seq_378239_x1
+ACCGGGTGTAAATCTGCTTG
+>seq_378240_x1
+TCACCGGGTGTAAATTAGCTT
+>seq_378241_x1
+AACACCGGGTGTACATCAGCTAA
+>seq_378242_x1
+CTCACCGGGTGTACATCAGCTA
+>seq_378243_x1
+TCACCGGGAGAAAAACTGGAT
+>seq_378244_x1
+ACCGGGTGAAAATTCGCACG
+>seq_378245_x1
+ACCGGGTGAAAATTCGCATC
+>seq_378246_x1
+ACCGGGTGGAAGCTAGCAGT
+>seq_378247_x1
+ACCGGGAGGAAAACTGGAGT
+>seq_378248_x1
+TGTGGGTGTCCGTTGCGGTGTTA
+>seq_378249_x1
+AGCTGATTTCGTCTTGGTAATAC
+>seq_378250_x1
+TCACCGGGTGTANATCAGCT
+>seq_378251_x1
+CCCGGGTGAACACTTGCAGT
+>seq_378252_x1
+ACCGGGTGAACACTTGCTGT
+>seq_378253_x1
+GCACCGGGTGAACACTTGCA
+>seq_378254_x1
+TGTGGGTGTCCGTTGCGGTGC
+>seq_378255_x1
+CGCCAATTTTCGCTTCAGCGC
+>seq_378256_x1
+TCACCGGGTGGAAACTAGCAGAGGC
+>seq_378257_x1
+ACGAAAAGGGGAGCAGAACGA
+>seq_378258_x1
+ACTGGGTGAAAATTCGCATG
+>seq_378259_x1
+TCACCGGGTGTACATCAGCCA
+>seq_378260_x1
+TCACCGGGTTTAAATCAGCTTG
+>seq_378261_x1
+TCACCGGGAGAAAATCTGGAGT
+>seq_378262_x1
+TAACCGGGTGTAAATCAGCTTG
+>seq_378263_x1
+TCACCGGGTGAAAATTCGCATGGC
+>seq_378264_x1
+TCACCGGGTGAAGATTCGCAT
+>seq_378265_x1
+TAAGCGTCGCGTGTTGTTAAG
+>seq_378266_x1
+TCACCGGGTGTACATCAGGTA
+>seq_378267_x1
+ACCTGGTGGAAACTAGCAGT
+>seq_378268_x1
+TAACCGGGTGAAAATTCGCAT
+>seq_378269_x1
+TCACCGGGTGGAAAATAG
+>seq_378270_x1
+CCGGGTGTACATCAGCTA
+>seq_378271_x1
+ACCGGGTGCACATCAGCTAA
+>seq_378272_x1
+TCACCGGGTGTACATGAGCTA
+>seq_378273_x1
+TCACCGGGAGTAAAACTGGAG
+>seq_378274_x1
+GAAAAGGGGAGCAGAACGAAAAT
+>seq_378275_x1
+CACGAAAAGGGGAGCAGAACGA
+>seq_378276_x1
+CGAAAAGGGGAGCAGAACGA
+>seq_378277_x1
+AGCTGATTTCGTCTTGATAAT
+>seq_378278_x1
+ACCGGGTGGAAACTAGCANT
+>seq_378279_x1
+ATCACCGGGGGAAAAATCACCTA
+>seq_378280_x1
+GGTGGTTTTTCTCTGCAGCGATA
+>seq_378281_x1
+TCACCGGGTGAAAAATCATCTA
+>seq_378282_x1
+ATCACCGGGTGGAAACTAGCA
+>seq_378283_x1
+TCACCGGGTGGAAACTAGCAGTGGTTC
+>seq_378284_x1
+CACCGGGTGAACNCTTGCAGT
+>seq_378285_x1
+TCACCGGGTGAACACTTGCGG
+>seq_378286_x1
+TCACCGGGTGGAAACTAGCAGTGACT
+>seq_378287_x1
+CGAAAAGGGGATCTGCAAAAAG
+>seq_378288_x1
+CGGGTGGAAACTAGAAGT
+>seq_378289_x1
+TTTCTTGTCCAATACATCT
+>seq_378290_x1
+TCACCGGGAGAAAAATTGGAG
+>seq_378291_x1
+TCACCCGGAGAAAAACTGGAGT
+>seq_378292_x1
+CAGCTGATTTCGTCTTGGTAAT
+>seq_378293_x1
+CGAAAAGGAGATCTGGCAC
+>seq_378294_x1
+TCACCGGGTGAACACTTNCAGT
+>seq_378295_x1
+TCANCGGGTGTACATCAGCTA
+>seq_378296_x1
+TATCACCGGGTGAAAAATCACCT
+>seq_378297_x1
+TAACCGGGTGAAAAATCACCTA
+>seq_378298_x1
+TCACCGGGTGGAAACTAGCAGTGGAT
+>seq_378299_x1
+TCACCGGGTGAACACTNGCAG
+>seq_378300_x1
+AGTGGATGTATGCCATGATGGTA
+>seq_378301_x1
+TCACCGGGTGTACGTCAGCTA
+>seq_378302_x1
+TAATATCGTCCTTCTTCAT
+>seq_378303_x1
+TCACTGGGTGAAAATTCGCAT
+>seq_378304_x1
+CGCCAATTTTCGCTTCAGGGCTA
+>seq_378305_x1
+AGCTGATTTCGTATTGGTAAT
+>seq_378306_x1
+TCAACGGGTGAACACTTG
+>seq_378307_x1
+TCACCGGGTGTAAATCAGCTAG
+>seq_378308_x1
+TGACCGGGAGAAAAACTGGAGTA
+>seq_378309_x1
+GGTATCACCGGGTGAACACTTGCAGT
+>seq_378310_x1
+CGCCAATTTTCGCTTCAGTTCT
+>seq_378311_x1
+CCACCGGGTGGAAACTAGCAGTGG
+>seq_378312_x1
+TCACCGGGTGCAAACTAGCAGTG
+>seq_378313_x1
+TCCGGGTGTACATCAGCTAA
+>seq_378314_x1
+ATCACCGGGAGTAAAACTGGAGT
+>seq_378315_x1
+TGCTGGTTTCTTCCACAGTGG
+>seq_378316_x1
+TCACCGGGTGAAAATTAGCA
+>seq_378317_x1
+TCAACGGGTGAAAATTCGCAT
+>seq_378318_x1
+TNACCGGGTGGAAACTAGCA
+>seq_378319_x1
+CAACGGGTGAACACTTGCAG
+>seq_378320_x1
+ATCACCGGGTGGAAACTAGCAGG
+>seq_378321_x1
+TGTGGGTGTCCGTTGCGGTGATA
+>seq_378322_x1
+TCACCGGGTGTAAATCAACT
+>seq_378323_x1
+TCACCGGGTGAAAATTCGCAGGG
+>seq_378324_x1
+TCACCGGGTGAACACTTGCAGTCG
+>seq_378325_x1
+ATCACCGGGTGTACATCACCTA
+>seq_378326_x1
+AGTGGATGTATGCTATGATGATA
+>seq_378327_x1
+TGATGGTTTCTTCCACAGTGGT
+>seq_378328_x1
+AATCACCGGGTGGAAACTAG
+>seq_378329_x1
+AGCTGATTACGTCTTGGTAAT
+>seq_378330_x1
+ACAGGGTGTACATCAGCTAA
+>seq_378331_x1
+TCACCGGGTGTATATCAGCT
+>seq_378332_x1
+ACCGGGTGGAAACTAGTAGT
diff -r 000000000000 -r 2c039fc73f1f tool_dependencies.xml
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Jan 27 09:06:15 2015 -0500
@@ -0,0 +1,45 @@
+<?xml version="1.0"?>
+<tool_dependency>
+  <package name="perl" version="5.18.1">
+      <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="bowtie" version="0.12.7">
+      <repository changeset_revision="9f9f38617a98" name="package_bowtie_0_12_7" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="vienna_rna" version="1.8.5">
+      <repository changeset_revision="54e961ee33d4" name="package_vienna_rna_1_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="pdf_api2" version="2.023">
+      <repository changeset_revision="b9b7fadfdb69" name="package_perl_pdf_api2_2_023" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="mirdeep2_quantifier" version="2.0">
+      <install version="1.0">
+          <actions>
+              <action type="download_by_url">https://raw.githubusercontent.com/bgruening/download_store/master/miRDeep2/miRDeep2-quantifier.tar.gz</action>
+                <action type="move_file">
+                  <source>quantifier.pl</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="move_file">
+                  <source>make_html2.pl</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="move_file">
+                  <source>convert_bowtie_output.pl</source>
+                    <destination>$INSTALL_DIR</destination>
+                </action>
+                <action type="set_environment">
+                  <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+
+The module maps the deep sequencing reads to predefined miRNA precursors and determines by that the expression of the corresponding miRNAs. 
+First, the predefined mature miRNA sequences are mapped to the predefined precursors. Optionally, predefined star sequences can be mapped to the precursors too. 
+By that the mature and star sequence in the precursors are determined. Second, the deep sequencing reads are mapped to the precursors. 
+The number of reads falling into an interval 2nt upstream and 5nt downstream of the mature/star sequence is determined.
+
+        </readme>
+    </package>
+</tool_dependency>