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diff test-data/coding.aln @ 0:2c51e264432a draft

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/rnacode commit 3f891a4e86b4b127815dc72a4292c232cda79293
author rnateam
date Fri, 19 Jun 2015 11:13:11 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/coding.aln	Fri Jun 19 11:13:11 2015 -0400
@@ -0,0 +1,33 @@
+CLUSTAL W(1.81) multiple sequence alignment
+
+
+ec_K12.chr_fwd/3401506-3401703                     TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
+ec_O157H7.chr_fwd/4138444-4138641                  TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
+ec_APEC_O1.chr_fwd/3685781-3685978                 TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
+ente638.chr_fwd/4000173-4000370                    TGCAGGCATTGATCTTAGAACAACAAGACGGCAAAACCCTGGCTTCGGTTCA--ATCCAT
+shigFlex_2A.chr_fwd/3391056-3391253                TGCAGGCGTTACTTTTAGAACAGCAGGACGGCAAAACTCTCGCATCAGTACA--GACTCT
+salmTyph.chr_fwd/3400613-3400810                   TGCAGGCGTTGATCTTAGAACAGCAGGACGGTAAAACCCTCGCATCCGTGCA--ACATCT
+salmEnte_PARATYPI_ATC.chr_fwd/3353535-3353732      TGCAGGCGTTGATCTTAGAACAGCAGGACGGTAAAACCCTCGCATCCGTGCA--ACATCT
+yersPest_CO92.chr_rev/569086-569283                TGCGAGCACTGATACTTGAGCAAATTGAAGGGCGTACCACCGCAGAAGTACGTCAAATTT
+
+
+ec_K12.chr_fwd/3401506-3401703                     GGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAA
+ec_O157H7.chr_fwd/4138444-4138641                  GGACGAAAGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAA
+ec_APEC_O1.chr_fwd/3685781-3685978                 GGACGAAAGTCGCCAGCCGGAAGGCGATGTCACGGTTGATGTTCACTGGTCGAGCCTGAA
+ente638.chr_fwd/4000173-4000370                    CGAGGCTACCCGCCTGCCCGAAGGCGACGTCACCGTTGACATTGACTGGTCCAGCCTGAA
+shigFlex_2A.chr_fwd/3391056-3391253                GGACGAACGTCGCCTGCCGGAGGGCGATGTCACGGTCGATGTTCACTGGTCGAGCCTGAA
+salmTyph.chr_fwd/3400613-3400810                   CGAAGAGAGTCAACTGCCGGCAGGTGATGTGACGGTGGATGTCCACTGGTCCAGCCTGAA
+salmEnte_PARATYPI_ATC.chr_fwd/3353535-3353732      CGAAGAGAGTCAACTGCCGGCAGGTGATGTGACGGTGGATGTCCACTGGTCCAGCCTGAA
+yersPest_CO92.chr_rev/569086-569283                CGGCCTCA--CAACTGCCTGCGGGTAATGTCACCGTAGATGTCAATTGGTCCAGCCTGAA
+
+
+ec_K12.chr_fwd/3401506-3401703                     CTATAAAGATGCGCTGG
+ec_O157H7.chr_fwd/4138444-4138641                  CTATAAAGATGCGCTGG
+ec_APEC_O1.chr_fwd/3685781-3685978                 CTACAAAGATGCGCTGG
+ente638.chr_fwd/4000173-4000370                    TTACAAGGACGCGCTCG
+shigFlex_2A.chr_fwd/3391056-3391253                CTATAAAGATGCGCTGG
+salmTyph.chr_fwd/3400613-3400810                   TTATAAAGATGCTCTGG
+salmEnte_PARATYPI_ATC.chr_fwd/3353535-3353732      TTATAAAGATGCTCTGG
+yersPest_CO92.chr_rev/569086-569283                TTATAAAGATGCGTTGG
+
+