annotate tool_dependencies.xml @ 0:a8ac09e937f3 draft

planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/sortmerna commit 04cfb5475292e4fd1f7c0ca86d8d0d5e5f886c3d-dirty

<?xml version="1.0"?>
<tool_dependency>
    <package name="sortmerna" version="1.9">
        <install version="1.0">
            <actions>
                <action type="download_by_url">http://bioinfo.lifl.fr/RNA/sortmerna/code/sortmerna-1.9.tar.gz</action>
                <action type="autoconf"/>
                <action type="set_environment">
                    <environment_variable name="SORTMERNADIR" action="set_to">$INSTALL_DIR</environment_variable>
                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        SortMeRNA requires g++ 4.3 or later. Installation may take a moment since ribosomal databases have to be indexed.
        </readme>
    </package>
</tool_dependency>