Mercurial > repos > rnateam > targetfinder

annotate test-data/targetfinder_test_08.tab @ 1:c9d56748fbde draft default tip

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"planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
author rnateam
date Thu, 25 Mar 2021 19:53:15 +0000
parents
children
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c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
1 Ath-miRN143 AT1G08500.1 | Symbols: ENODL18, AtENODL18 | early nodulin-like protein 18 | chr1:2688880-26902 372 391 + 6.5 AAUUAUCA-GAAAUGGGCCGA :::.:: : :: :::::::.: UUAGUAUUGCUGUACCCGGUU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
2 Ath-miR165a AT2G01260.1 | Symbols: no symbol available | no full name available | chr2:135223-137916 REVER 293 312 - 6 CGGCGAAGAAGCUUGGUC-GA :: :: :::::.::::: :: CCCCCUACUUCGGACCAGGCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
3 Ath-miRN134 AT1G60030.1 | Symbols: NAT7, ATNAT7 | nucleobase-ascorbate transporter 7, ARABIDOPSIS NUCLEOBA 1655 1675 + 5 AGAACAAAAUUCAUCCUCGGA ::: : :::::::::: :.:: UCUAGGUUUAAGUAGG-GUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
4 Ath-miRN134 AT1G65330.1 | Symbols: PHE1, AGL37 | AGAMOUS-like 37, PHERES1 | chr1:24266257-24267336 REVERSE 706 726 - 5 AGAUCCAAAUUCAUACUCUGA :::::::::::::: :.: :: UCUAGGUUUAAGUA-GGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
5 Ath-miRN134 AT2G18700.1 | Symbols: TPS11, ATTPSB, ATTPS11 | trehalose phosphatase/synthase 11, TREHALOSE-6 1442 1461 - 5.5 GGCACCAAAUUCAUCCCAUC .: :::::::::::::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
6 Ath-miRN134 AT1G30280.1 | Symbols: no symbol available | no full name available | chr1:10662621-10664668 R 761 779 + 6 GGAUCCGAAUUCCUUC-AGA .:::::.::::: :.: ::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
7 Ath-miRN134 AT1G73010.1 | Symbols: PS2, ATPS2, AtPPsPase1, PPsPase1 | pyrophosphate-specific phosphatase1, 1149 1167 + 6 AGAUU-GAAUUUAUCCUAAA ::::. .::::.::::.: : UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
8 Ath-miRN134 AT1G30080.1 | Symbols: no symbol available | no full name available | chr1:10550855-10553295 R 1131 1151 - 6 CAAUCCAUAAUUCCUCUCAGA ::::: ::::: ::.:::: UCUAGGU-UUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
9 Ath-miRN134 AT1G29670.1 | Symbols: no symbol available | no full name available | chr1:10375754-10377871 F 1063 1082 - 6 AGGGUGAAAUGCGUCCCAGA ::. . :::: :.::::::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
10 Ath-miRN134 AT1G60030.1 | Symbols: NAT7, ATNAT7 | nucleobase-ascorbate transporter 7, ARABIDOPSIS NUCLEOBA 1525 1543 - 6 AGCUCCAAAUUUA-CCAAGA :: ::::::::.: :: ::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
11 Ath-miRN134 AT2G47500.1 | Symbols: no symbol available | no full name available | chr2:19492867-19498189 F 1211 1230 + 6.5 AGAAUCAACUUCGUCACAGA ::: .::: :::.:: :::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
12 Ath-miRN134 AT1G62430.1 | Symbols: CDS1, ATCDS1 | CDP-diacylglycerol synthase 1 | chr1:23105905-23109534 R 1610 1628 + 6.5 AGAUUCUGAUUC-UCCAAGA ::::.: .:::: ::: ::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
13 Ath-miRN134 AT1G30280.1 | Symbols: no symbol available | no full name available | chr1:10662621-10664668 R 468 486 + 6.5 AGAUC-GAAUUCAUCGUCGA ::::: .:::::::: . :: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
14 Ath-miRN134 AT2G14960.1 | Symbols: GH3.1 | | chr2:6451319-6453797 REVERSE LENGTH=2240 536 555 - 6.5 ACAUACAAAUUCAUUACGGG : :: :::::::::. :.:. UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
15 Ath-miRN134 AT1G58340.1 | Symbols: ABS4, ZF14, BCD1, ZRZ | BUSH-AND-CHLOROTIC-DWARF 1, ZRIZI, Arabidopsis 2041 2059 - 6.5 AAAUUCACAUUC-UCCUAGA : ::.:: :::: :::.::: UCUAGGUUUAAGUAGGGUCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
16 Ath-miR861 AT2G41190.1 | Symbols: no symbol available | no full name available | chr2:17167279-17170559 R 1974 1994 + 5.5 GACCUUGGGGACAUAUUCUUC : :::::..:::::::.: :: CAGGAACUUCUGUAUAGGUAG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
17 Ath-miR861 AT1G04240.1 | Symbols: SHY2, IAA3 | SHORT HYPOCOTYL 2, indole-3-acetic acid inducible 3 | chr1 798 819 - 5.5 UUUCUUGAAGAUAUAUCUCAUA :.::::::::.::::: ::: CAGGAACUUCUGUAUAG-GUAG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
18 Ath-miR861 AT1G29025.1 | Symbols: no symbol available | no full name available | chr1:10124286-10127098 R 449 469 - 5.5 AACUUGGAAGACAUAUCCUUC :.: :::::::::::: :: CAGGAACUUCUGUAUAGGUAG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
19 Ath-miR861 AT1G14520.1 | Symbols: MIOX1 | myo-inositol oxygenase 1 | chr1:4968134-4970311 REVERSE LENGTH= 1310 1330 - 6 AUUCAUCAAGGCAUAUCCGUU :.: : :::.:::::::.:. CAGGAACUUCUGUAUAGGUAG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
20 Ath-miR861 AT1G52750.1 | Symbols: no symbol available | no full name available | chr1:19646465-19649340 R 2066 2086 - 6.5 GUUCUCGCAGAUGUUUCCAUC ::.:: : :::..: :::::: CAGGAACUUCUGUAUAGGUAG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
21 Ath-miR393a AT1G09812.1 | Symbols: no symbol available | no full name available | chr1:3187442-3188854 FOR 452 474 + 5.5 CGAUGAAUGCGAUCUCAUUUGGG ::: :::::::::.: :::::. CCUAGUUACGCUAGGG-AAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
22 Ath-miR393a AT2G33380.1 | Symbols: AtRD20, PXG3, CLO-3, CLO3, RD20, AtCLO3 | caleosin 3, Arabidopsis thali 719 739 + 5.5 AUGGCAAU-CGAUCCUUUUGGA . :::: ::::::.:::::: CCUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
23 Ath-miR393a AT1G73010.1 | Symbols: PS2, ATPS2, AtPPsPase1, PPsPase1 | pyrophosphate-specific phosphatase1, 1142 1163 - 6 GGAUAAAUUCAAUCUUUUUGGA :::: ::: : :::..:::::: CCUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
24 Ath-miR2111b AT1G74420.2 | Symbols: FUT3, ATFUT3 | fucosyltransferase 3 | chr1:27967894-27969871 REVERSE LE 1212 1232 - 5.5 UCAACUUCAGGAAGCAGCUUA : :::.:::::: :::: ::: AUUUGGAGUCCUACGUCUAAU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
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diff changeset
25 No results for Ath-miR168a
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
26 Ath-miR156e AT1G04680.1 | Symbols: no symbol available | no full name available | chr1:1303467-1307973 REV 1263 1281 - 3.5 GUGUCCACUCUCUUC-GUCA :::. :::::::::: :::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
27 Ath-miR156e AT1G26890.1 | Symbols: no symbol available | no full name available | chr1:9317589-9319246 FOR 948 967 + 4 GAGAUCUCUUUCUUCUGUCA : : :: ::.:::::::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
28 Ath-miR156e AT2G33420.1 | Symbols: no symbol available | no full name available | chr2:14158671-14162618 F 671 689 - 4 CUG-UCACUCUGUUCUGUCA :: ::::::: :::::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
29 Ath-miR156e AT2G12400.1 | Symbols: no symbol available | no full name available | chr2:5004884-5008442 REV 347 365 + 5 GUGUUUACUCUCUUC-GUUU :::.:.::::::::: ::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
30 Ath-miR156e AT1G11960.1 | Symbols: no symbol available | no full name available | chr1:4039566-4044021 REV 1472 1490 + 5 UUCCUCACUUUCUUCU-UCA : ::::::.:::::: ::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
31 Ath-miR156e AT2G04500.1 | Symbols: no symbol available | no full name available | chr2:1568279-1570271 FOR 147 166 - 5.5 AUCUUCACUUUCUUCUGUUU : .:::::.::::::::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
32 Ath-miR156e AT1G68410.1 | Symbols: no symbol available | no full name available | chr1:25649624-25653002 R 975 994 - 5.5 GCGUUCCCUCUCUUCUGUAU : :.:: ::::::::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
33 Ath-miR156e AT1G29025.1 | Symbols: no symbol available | no full name available | chr1:10124286-10127098 R 1649 1668 + 6 UUGUCUGCUCACUUCUGUCG ::. ..::: ::::::::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
34 Ath-miR156e AT2G17660.1 | Symbols: no symbol available | no full name available | chr2:7673145-7673712 FOR 82 101 + 6 CUGUUUUCUCUCUUCUCUCC ::.:. ::::::::: :: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
35 Ath-miR156e AT1G22470.1 | Symbols: no symbol available | no full name available | chr1:7932777-7933604 REV 570 590 + 6 CUUCUUAUUACUCUUCUGUCU : ::.:.: :::::::::: CACGAGUGA-GAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
36 Ath-miR156e AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 | chr2:18441828-18443405 REVERSE LENGTH=1169 68 88 + 6 UUUUUCUUUCUCUCUCUGUCA : .:: .::::: ::::::: CACGAGUGAGAGA-AGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
37 Ath-miR156e AT1G52565.1 | Symbols: no symbol available | no full name available | chr1:19579839-19580977 R 1021 1041 - 6 UUUCUUACUCUUUUCUUGUCG : ::.:::::.:::: :::. CACGAGUGAGAGAAGA-CAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
38 Ath-miR156e AT1G23760.1 | Symbols: JP630, PG3 | POLYGALACTURONASE 3 | chr1:8401808-8404301 FORWARD LENGTH= 1972 1992 + 6.5 UUACUUACUCUACUACUGUCA : ::.::::: :: :::::: CACGAGUGAGA-GAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
39 Ath-miR156e AT2G27930.1 | Symbols: no symbol available | no full name available | chr2:11892058-11893488 F 279 298 + 6.5 AUGUUCUGUCUCUCCUGUCA ::.:: ::::: :::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
40 Ath-miR156e AT1G02400.1 | Symbols: ATGA2OX6, DTA1, ATGA2OX4, GA2OX6 | Arabidopsis thaliana gibberellin 2-o 76 96 + 6.5 GAGCUCGUCACUCUUCUUUCA : ::::. : ::::::: ::: CACGAGU-GAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
41 Ath-miR156e AT2G18700.1 | Symbols: TPS11, ATTPSB, ATTPS11 | trehalose phosphatase/synthase 11, TREHALOSE-6 2669 2688 - 6.5 UUGCUCUGUUUCUUCUGUUG ::::: :.::::::::.. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
42 Ath-miR156e AT1G02650.1 | Symbols: no symbol available | no full name available | chr1:568558-570418 FORWA 173 193 - 6.5 UUGUCCACUUUCUUUCUGUUA ::. ::::.:::: ::::.: CACGAGUGAGAGAA-GACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
43 Ath-miR156e AT2G30985.1 | Symbols: no symbol available | no full name available | chr2:13186716-13187200 F 410 430 - 6.5 AUUUUCAUGUUUCUUCUGUCG : .:::. :.:::::::::. CACGAGUG-AGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
44 Ath-miR156e AT2G14890.1 | Symbols: AGP9 | arabinogalactan protein 9 | chr2:6399405-6401149 FORWARD LENGTH= 248 266 - 6.5 UUGCUUUUUCUCU-CUGUUA ::::. .::::: ::::.: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
45 Ath-miR156e AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan protein 16 precursor | chr2:1505 1097 1116 - 6.5 GUACAUACUCUCCUCUGUUU :: : .:::::: :::::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
46 Ath-miR165b AT2G01260.1 | Symbols: no symbol available | no full name available | chr2:135223-137916 REVER 293 312 - 6 CGGCGAAGAAGCUUGGUC-GA :: :: :::::.::::: :: CCCCCUACUUCGGACCAGGCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
47 Ath-miRN146 AT1G62620.1 | Symbols: no symbol available | no full name available | chr1:23182644-23185151 F 242 263 + 6 CAUUCAAGCGUCUAUAGAUCUC :::: :: :::::::.:.:.: CUAAGCUC-CAGAUAUUUGGGG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
48 Ath-miRN146 AT1G62610.4 | Symbols: no symbol available | no full name available | chr1:23181508-23183183 R 278 299 - 6 CAUUCAAGCGUCUAUAGAUCUC :::: :: :::::::.:.:.: CUAAGCUC-CAGAUAUUUGGGG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
49 Ath-miRN146 AT1G63020.1 | Symbols: NRPD1, NRPD1A, POL IVA, SMD2, SDE4 | SILENCING MOVEMENT DEFICIENT 2, NU 470 489 + 6.5 AUUUCGGGGU-UAUAAACUUC ::::.::: :::::::..: CUAAGCUCCAGAUAUUUGGGG
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
50 Ath-miR170 AT1G26770.2 | Symbols: ATHEXP ALPHA 1.1, ATEXPA10, AT-EXP10, EXPA10, ATEXP10, EXP10 | expansin 321 341 + 5.5 GGUGUUUACCUGGCUCAAUCG :.:.:: :: .:::::::::. CUAUAACUGUGCCGAGUUAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
51 Ath-miR170 AT1G10340.1 | Symbols: no symbol available | no full name available | chr1:3390475-3392633 REV 716 736 + 6 UAUAUUGUUAGGGCUCGAUCA :::::: .: :::::.:::: CUAUAACUGUGCCGAGUUAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
52 Ath-miR170 AT2G32800.1 | Symbols: LecRK-S.2, AP4.3A | L-type lectin receptor kinase S.2 | chr2:13916440-1 1662 1681 + 6.5 GAUUUUGGUACGGCUUA-UUA ::: :::..::::::.: :.: CUAUAACUGUGCCGAGUUAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
53 Ath-miR170 AT1G03445.1 | Symbols: BSU1 | BRI1 SUPPRESSOR 1 | chr1:854410-859701 REVERSE LENGTH=2727 354 374 + 6.5 GAAGUGGACAAGGCUUAAUCC :: .: :::: ::::.:::: CUAUAACUGUGCCGAGUUAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
54 Ath-miRN132 AT1G56660.1 | Symbols: no symbol available | no full name available | chr1:21237839-21241014 F 477 497 + 5 AGAGAAGAAACACGAGGAGUU :: :: : :::::::::: :: UCGCUACGUUGUGCUCCUGAA
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
55 Ath-miRN132 AT1G67856.1 | Symbols: no symbol available | no full name available | chr1:25442404-25443690 F 910 930 - 6.5 AGUUAUGGAGUACGAAGACUU ::. ::: :..:::: ::::: UCGCUACGUUGUGCUCCUGAA
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
56 Ath-miR156c AT1G04680.1 | Symbols: no symbol available | no full name available | chr1:1303467-1307973 REV 1263 1281 - 3.5 GUGUCCACUCUCUUC-GUCA :::. :::::::::: :::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
57 Ath-miR156c AT1G26890.1 | Symbols: no symbol available | no full name available | chr1:9317589-9319246 FOR 948 967 + 4 GAGAUCUCUUUCUUCUGUCA : : :: ::.:::::::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
58 Ath-miR156c AT2G33420.1 | Symbols: no symbol available | no full name available | chr2:14158671-14162618 F 671 689 - 4 CUG-UCACUCUGUUCUGUCA :: ::::::: :::::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
59 Ath-miR156c AT2G12400.1 | Symbols: no symbol available | no full name available | chr2:5004884-5008442 REV 347 365 + 5 GUGUUUACUCUCUUC-GUUU :::.:.::::::::: ::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
60 Ath-miR156c AT1G11960.1 | Symbols: no symbol available | no full name available | chr1:4039566-4044021 REV 1472 1490 + 5 UUCCUCACUUUCUUCU-UCA : ::::::.:::::: ::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
61 Ath-miR156c AT2G04500.1 | Symbols: no symbol available | no full name available | chr2:1568279-1570271 FOR 147 166 - 5.5 AUCUUCACUUUCUUCUGUUU : .:::::.::::::::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
62 Ath-miR156c AT1G68410.1 | Symbols: no symbol available | no full name available | chr1:25649624-25653002 R 975 994 - 5.5 GCGUUCCCUCUCUUCUGUAU : :.:: ::::::::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
63 Ath-miR156c AT1G29025.1 | Symbols: no symbol available | no full name available | chr1:10124286-10127098 R 1649 1668 + 6 UUGUCUGCUCACUUCUGUCG ::. ..::: ::::::::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
64 Ath-miR156c AT2G17660.1 | Symbols: no symbol available | no full name available | chr2:7673145-7673712 FOR 82 101 + 6 CUGUUUUCUCUCUUCUCUCC ::.:. ::::::::: :: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
65 Ath-miR156c AT1G22470.1 | Symbols: no symbol available | no full name available | chr1:7932777-7933604 REV 570 590 + 6 CUUCUUAUUACUCUUCUGUCU : ::.:.: :::::::::: CACGAGUGA-GAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
66 Ath-miR156c AT2G44740.1 | Symbols: CYCP4;1 | cyclin p4;1 | chr2:18441828-18443405 REVERSE LENGTH=1169 68 88 + 6 UUUUUCUUUCUCUCUCUGUCA : .:: .::::: ::::::: CACGAGUGAGAGA-AGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
67 Ath-miR156c AT1G52565.1 | Symbols: no symbol available | no full name available | chr1:19579839-19580977 R 1021 1041 - 6 UUUCUUACUCUUUUCUUGUCG : ::.:::::.:::: :::. CACGAGUGAGAGAAGA-CAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
68 Ath-miR156c AT1G23760.1 | Symbols: JP630, PG3 | POLYGALACTURONASE 3 | chr1:8401808-8404301 FORWARD LENGTH= 1972 1992 + 6.5 UUACUUACUCUACUACUGUCA : ::.::::: :: :::::: CACGAGUGAGA-GAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
69 Ath-miR156c AT2G27930.1 | Symbols: no symbol available | no full name available | chr2:11892058-11893488 F 279 298 + 6.5 AUGUUCUGUCUCUCCUGUCA ::.:: ::::: :::::: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
70 Ath-miR156c AT1G02400.1 | Symbols: ATGA2OX6, DTA1, ATGA2OX4, GA2OX6 | Arabidopsis thaliana gibberellin 2-o 76 96 + 6.5 GAGCUCGUCACUCUUCUUUCA : ::::. : ::::::: ::: CACGAGU-GAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
71 Ath-miR156c AT2G18700.1 | Symbols: TPS11, ATTPSB, ATTPS11 | trehalose phosphatase/synthase 11, TREHALOSE-6 2669 2688 - 6.5 UUGCUCUGUUUCUUCUGUUG ::::: :.::::::::.. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
72 Ath-miR156c AT1G02650.1 | Symbols: no symbol available | no full name available | chr1:568558-570418 FORWA 173 193 - 6.5 UUGUCCACUUUCUUUCUGUUA ::. ::::.:::: ::::.: CACGAGUGAGAGAA-GACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
73 Ath-miR156c AT2G30985.1 | Symbols: no symbol available | no full name available | chr2:13186716-13187200 F 410 430 - 6.5 AUUUUCAUGUUUCUUCUGUCG : .:::. :.:::::::::. CACGAGUG-AGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
74 Ath-miR156c AT2G14890.1 | Symbols: AGP9 | arabinogalactan protein 9 | chr2:6399405-6401149 FORWARD LENGTH= 248 266 - 6.5 UUGCUUUUUCUCU-CUGUUA ::::. .::::: ::::.: CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
75 Ath-miR156c AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan protein 16 precursor | chr2:1505 1097 1116 - 6.5 GUACAUACUCUCCUCUGUUU :: : .:::::: :::::. CACGAGUGAGAGAAGACAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
76 No results for Ath-miR829
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
77 Ath-miR851 AT1G30080.1 | Symbols: no symbol available | no full name available | chr1:10550855-10553295 R 1311 1330 + 6.5 GUU-UAUUUGUUGGCCAUUCA ::. : :::::: ::::..:: CAGCAGAAACAAACGGUGGGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
78 Ath-miR851 AT1G80120.1 | Symbols: no symbol available | no full name available | chr1:30138818-30140360 F 1059 1079 - 6.5 CUCGAUUUUGUUUGCGUCCCA ::: .::::::::: :::: CAGCAGAAACAAACGGUGGGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
79 Ath-miR395d AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:17918207-17921116 FORWARD LENGTH=2 2273 2294 - 6 GAUUUCUCCCCAACCAUUUCAU :: ::: :::::: ::.:::: CUCAAG-GGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
80 Ath-miR395d AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 871 891 - 6 GAGCUGUUCCAAACUCUUCAU ::: : ..:::::: ::::: CUCAAGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
81 Ath-miR395d AT2G23170.1 | Symbols: GH3.3 | | chr2:9863855-9866562 REVERSE LENGTH=2118 1787 1808 + 6.5 GGGUUGUAUCUACACACUUCAG :.::: . .:.: ::::::::: CUCAAGG-GGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
82 Ath-miR395c AT1G66400.1 | Symbols: CML23 | calmodulin like 23 | chr1:24770419-24771393 REVERSE LENGTH=975 189 209 + 6 CUCUCUCUCCAAACGCUUCAC ::.:.::::::.::::: CUCAGGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
83 Ath-miR395c AT1G07720.1 | Symbols: KCS3 | 3-ketoacyl-CoA synthase 3 | chr1:2390655-2392500 REVERSE LENGTH= 812 833 - 6 GCGUCCUUACCAAACACCUUAG : ::::.. :::::::: :.:: CUCAGGGG-GGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
84 Ath-miR395c AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 871 891 - 6.5 GAGCUGUUCCAAACUCUUCAU ::: . ..:::::: ::::: CUCAGGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
85 Ath-miR393b AT1G09812.1 | Symbols: no symbol available | no full name available | chr1:3187442-3188854 FOR 453 474 + 4.5 GAUGAAUGCGAUCUCAUUUGGG ::: :::::::::.: :::::. CUAGUUACGCUAGGG-AAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
86 Ath-miR393b AT2G33380.1 | Symbols: AtRD20, PXG3, CLO-3, CLO3, RD20, AtCLO3 | caleosin 3, Arabidopsis thali 720 739 + 4.5 UGGCAAU-CGAUCCUUUUGGA . :::: ::::::.:::::: CUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
87 Ath-miR393b AT1G20070.1 | Symbols: no symbol available | no full name available | chr1:6958010-6959148 REV 72 91 + 5 UAUCAAAACGAUCC-UUUGGA ::::: :::::: :::::: CUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
88 Ath-miR393b AT1G63300.1 | Symbols: no symbol available | no full name available | chr1:23481907-23486220 F 1397 1416 + 6 GAUCCAUG-GGUUCUUUUGGA :::: ::: :.:.:.:::::: CUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
89 Ath-miR393b AT1G73010.1 | Symbols: PS2, ATPS2, AtPPsPase1, PPsPase1 | pyrophosphate-specific phosphatase1, 1142 1162 - 6 GAUAAAUUCAAUCUUUUUGGA ::: ::: : :::..:::::: CUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
90 Ath-miR393b AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 2205 2224 - 6 UGUCGUUGC-AUCCCUUUGGU .::. ::: :::::::::: CUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
91 Ath-miR393b AT1G15330.1 | Symbols: no symbol available | no full name available | chr1:5274271-5275602 FOR 527 546 - 6.5 GCUCGAUG-GAUCCCUUUGCU : ::.::: :::::::::: CUAGUUACGCUAGGGAAACCU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
92 Ath-miR395a AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:17918207-17921116 FORWARD LENGTH=2 2273 2294 - 6 GAUUUCUCCCCAACCAUUUCAU :: ::: :::::: ::.:::: CUCAAG-GGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
93 Ath-miR395a AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 871 891 - 6 GAGCUGUUCCAAACUCUUCAU ::: : ..:::::: ::::: CUCAAGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
94 Ath-miR395a AT2G23170.1 | Symbols: GH3.3 | | chr2:9863855-9866562 REVERSE LENGTH=2118 1787 1808 + 6.5 GGGUUGUAUCUACACACUUCAG :.::: . .:.: ::::::::: CUCAAGG-GGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
95 Ath-miRN118 AT1G78720.1 | Symbols: no symbol available | no full name available | chr1:29605457-29607678 F 523 542 + 5.5 GCUAUUCUUAUCAUAGUUCA ::.: : :.::::.::.::: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
96 Ath-miRN118 AT1G01200.1 | Symbols: RABA3, ATRABA3, ATRAB-A3 | ARABIDOPSIS RAB GTPASE HOMOLOG A3, RAB GTPas 484 503 + 6 GGCAAACUCGUCAAAGCUCA : ::: ::.::: :::::: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
97 Ath-miRN118 AT2G42380.2 | Symbols: BZIP34, ATBZIP34 | | chr2:17646885-17649062 REVERSE LENGTH=1688 1497 1516 - 6 ACUGAAUUCAUCACAACUUA :..: ::::::::: ::.: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
98 Ath-miRN118 AT1G79840.2 | Symbols: GL2 | GLABRA 2 | chr1:30036956-30041440 FORWARD LENGTH=2895 1414 1432 - 6 GCCCAUUUC-UCAGGGCUCA ::: ::::: ::: .::::: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
99 Ath-miRN118 AT1G52750.1 | Symbols: no symbol available | no full name available | chr1:19646465-19649340 R 1031 1051 + 6.5 GUCAUUUUCAUCGAAGCUACA :.:: :::::::. :::: :: CGGUUAAAGUAGUGUCGA-GU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
100 Ath-miRN118 AT2G18700.1 | Symbols: TPS11, ATTPSB, ATTPS11 | trehalose phosphatase/synthase 11, TREHALOSE-6 2157 2175 - 6.5 GCUAUUUUCUUC-CAGCUUA ::.: :::: :: :::::.: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
101 Ath-miRN118 AT1G04660.1 | Symbols: no symbol available | no full name available | chr1:1300368-1301773 REV 122 140 - 6.5 GCUA-UAUCAUCAUAAUUCA ::.: : ::::::.: .::: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
102 Ath-miRN118 AT2G06850.1 | Symbols: EXT, XTH4, EXGT-A1 | ENDOXYLOGLUCAN TRANSFERASE, endoxyloglucan transfe 485 503 - 6.5 GUCUAUCUCGUCAU-GCUCA :.: :: ::.:::. ::::: CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
103 Ath-miRN118 AT1G17300.1 | Symbols: no symbol available | no full name available | chr1:5926994-5927440 FOR 16 34 - 6.5 GCAAAUCUC-UCGCAGCUUG :: ::: :: ::.:::::.. CGGUUAAAGUAGUGUCGAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
104 Ath-miR395f AT1G66400.1 | Symbols: CML23 | calmodulin like 23 | chr1:24770419-24771393 REVERSE LENGTH=975 189 209 + 6 CUCUCUCUCCAAACGCUUCAC ::.:.::::::.::::: CUCAGGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
105 Ath-miR395f AT1G07720.1 | Symbols: KCS3 | 3-ketoacyl-CoA synthase 3 | chr1:2390655-2392500 REVERSE LENGTH= 812 833 - 6 GCGUCCUUACCAAACACCUUAG : ::::.. :::::::: :.:: CUCAGGGG-GGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
106 Ath-miR395f AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 871 891 - 6.5 GAGCUGUUCCAAACUCUUCAU ::: . ..:::::: ::::: CUCAGGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
107 Ath-miR156g AT1G04680.1 | Symbols: no symbol available | no full name available | chr1:1303467-1307973 REV 1263 1281 - 4.5 GUGUCCACUCUCUUC-GUCA :::. :::::::::: ::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
108 Ath-miR156g AT2G12400.1 | Symbols: no symbol available | no full name available | chr2:5004884-5008442 REV 347 365 + 5 GUGUUUACUCUCUUC-GUUU :::.:.::::::::: ::. CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
109 Ath-miR156g AT1G26890.1 | Symbols: no symbol available | no full name available | chr1:9317589-9319246 FOR 948 967 + 5 GAGAUCUCUUUCUUCUGUCA : : :: ::.::::::::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
110 Ath-miR156g AT2G33420.1 | Symbols: no symbol available | no full name available | chr2:14158671-14162618 F 671 689 - 5 CUG-UCACUCUGUUCUGUCA :: ::::::: ::::::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
111 Ath-miR156g AT1G29025.1 | Symbols: no symbol available | no full name available | chr1:10124286-10127098 R 1649 1668 + 5.5 UUGUCUGCUCACUUCUGUCG ::. ..::: ::::::::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
112 Ath-miR156g AT2G04500.1 | Symbols: no symbol available | no full name available | chr2:1568279-1570271 FOR 147 166 - 5.5 AUCUUCACUUUCUUCUGUUU : .:::::.::::::::. CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
113 Ath-miR156g AT1G52565.1 | Symbols: no symbol available | no full name available | chr1:19579839-19580977 R 1021 1041 - 5.5 UUUCUUACUCUUUUCUUGUCG : ::.:::::.:::: :::: CACGAGUGAGAGAAGA-CAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
114 Ath-miR156g AT1G68410.1 | Symbols: no symbol available | no full name available | chr1:25649624-25653002 R 975 994 - 5.5 GCGUUCCCUCUCUUCUGUAU : :.:: ::::::::::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
115 Ath-miR156g AT2G17660.1 | Symbols: no symbol available | no full name available | chr2:7673145-7673712 FOR 82 101 + 6 CUGUUUUCUCUCUUCUCUCC ::.:. ::::::::: :: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
116 Ath-miR156g AT1G22470.1 | Symbols: no symbol available | no full name available | chr1:7932777-7933604 REV 570 590 + 6 CUUCUUAUUACUCUUCUGUCU : ::.:.: :::::::::: CACGAGUGA-GAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
117 Ath-miR156g AT1G11960.1 | Symbols: no symbol available | no full name available | chr1:4039566-4044021 REV 1472 1490 + 6 UUCCUCACUUUCUUCU-UCA : ::::::.:::::: :: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
118 Ath-miR156g AT2G18700.1 | Symbols: TPS11, ATTPSB, ATTPS11 | trehalose phosphatase/synthase 11, TREHALOSE-6 2669 2688 - 6 UUGCUCUGUUUCUUCUGUUG ::::: :.::::::::.: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
119 Ath-miR156g AT2G30985.1 | Symbols: no symbol available | no full name available | chr2:13186716-13187200 F 410 430 - 6 AUUUUCAUGUUUCUUCUGUCG : .:::. :.:::::::::: CACGAGUG-AGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
120 Ath-miR156g AT1G01600.1 | Symbols: CYP86A4 | "cytochrome P450, family 86, subfamily A, polypeptide 4" | ch 2159 2178 - 6.5 UUUCUUUCUUUUUUUUGUCG : ::. ::.:.::.::::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
121 Ath-miR156g AT2G35860.1 | Symbols: FLA16 | FASCICLIN-like arabinogalactan protein 16 precursor | chr2:1505 1097 1116 - 6.5 GUACAUACUCUCCUCUGUUU :: : .:::::: :::::. CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
122 Ath-miR156g AT1G09932.1 | Symbols: no symbol available | no full name available | chr1:3230716-3233259 REV 154 172 - 6.5 CUUCUUCUUCUCUUCU-UCG : ::. .:::::::: ::: CACGAGUGAGAGAAGACAGC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
123 Ath-miR171a AT1G26770.2 | Symbols: ATHEXP ALPHA 1.1, ATEXPA10, AT-EXP10, EXPA10, ATEXP10, EXP10 | expansin 321 341 + 6.5 GGUGUUUACCUGGCUCAAUCG :.:.:: : .:::::::::. CUAUAACCGCGCCGAGUUAGU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
124 Ath-miR395e AT1G48480.1 | Symbols: RKL1 | receptor-like kinase 1 | chr1:17918207-17921116 FORWARD LENGTH=2 2273 2294 - 6 GAUUUCUCCCCAACCAUUUCAU :: ::: :::::: ::.:::: CUCAAG-GGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
125 Ath-miR395e AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 871 891 - 6 GAGCUGUUCCAAACUCUUCAU ::: : ..:::::: ::::: CUCAAGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
126 Ath-miR395e AT2G23170.1 | Symbols: GH3.3 | | chr2:9863855-9866562 REVERSE LENGTH=2118 1787 1808 + 6.5 GGGUUGUAUCUACACACUUCAG :.::: . .:.: ::::::::: CUCAAGG-GGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
127 Ath-miR2111a AT1G74420.2 | Symbols: FUT3, ATFUT3 | fucosyltransferase 3 | chr1:27967894-27969871 REVERSE LE 1212 1232 - 5.5 UCAACUUCAGGAAGCAGCUUA : :::.:::::: :::: ::: AUUUGGAGUCCUACGUCUAAU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
128 Ath-miR395b AT1G66400.1 | Symbols: CML23 | calmodulin like 23 | chr1:24770419-24771393 REVERSE LENGTH=975 189 209 + 6 CUCUCUCUCCAAACGCUUCAC ::.:.::::::.::::: CUCAGGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
129 Ath-miR395b AT1G07720.1 | Symbols: KCS3 | 3-ketoacyl-CoA synthase 3 | chr1:2390655-2392500 REVERSE LENGTH= 812 833 - 6 GCGUCCUUACCAAACACCUUAG : ::::.. :::::::: :.:: CUCAGGGG-GGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
130 Ath-miR395b AT1G62440.1 | Symbols: LRX2 | leucine-rich repeat/extensin 2 | chr1:23112933-23115293 FORWARD 871 891 - 6.5 GAGCUGUUCCAAACUCUUCAU ::: . ..:::::: ::::: CUCAGGGGGGUUUGUGAAGUC
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
131 Ath-miR171c AT2G32800.1 | Symbols: LecRK-S.2, AP4.3A | L-type lectin receptor kinase S.2 | chr2:13916440-1 1659 1679 + 6 GUUGAUUUUGGUACGGCUUAU :::: ::::.::::::.: GCACUAUAACCGUGCCGAGUU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
132 Ath-miR171c AT1G01600.1 | Symbols: CYP86A4 | "cytochrome P450, family 86, subfamily A, polypeptide 4" | ch 407 428 + 6.5 CAGGGUAUUGGCUAUGGUUCAA : :.::::::: :.::.:::: GCACUAUAACCG-UGCCGAGUU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
133 Ath-miR171c AT1G08570.1 | Symbols: ACHT4 | atypical CYS HIS rich thioredoxin 4 | chr1:2712694-2714833 FOR 924 944 - 6.5 CGUGGCAUUGGUACAGCUAAA ::::. :::::.:: ::: :: GCACUAUAACCGUGCCGAGUU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
134 Ath-miR171c AT2G02640.1 | Symbols: no symbol available | no full name available | chr2:732291-734271 FORWA 1458 1478 - 6.5 CUUGAUAAUUGAACGGCUCAG : ::::: : : ::::::::. GCACUAUAACCGUGCCGAGUU
c9d56748fbde "planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/targetfinder/ commit fe9dd99a14770b6c5f26e24893599acb577e304f"
rnateam
parents:
diff changeset
135 Ath-miR171c AT1G75780.1 | Symbols: TUB1 | tubulin beta-1 chain | chr1:28451138-28453820 REVERSE LENGTH=180 760 779 - 6.5 AGUUGCAUUG-UACGGCUCAA :: . :::: .::::::::: GCACUAUAACCGUGCCGAGUU