# HG changeset patch
# User rnateam
# Date 1506110239 14400
# Node ID b31dcdb3120994373e756d9e2f9dd97101b0f9f8
# Parent  b0542404266124c5218cd84337c1cfe9f8e0ecfe
planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/tools/rna_tools/vienna_rna commit e3c20fec5dafc424d55a4de77304e79e3c88b76b-dirty

diff -r b05424042661 -r b31dcdb31209 rnafold.xml
--- a/rnafold.xml	Tue Jul 18 01:49:11 2017 -0400
+++ b/rnafold.xml	Fri Sep 22 15:57:19 2017 -0400
@@ -201,7 +201,7 @@
                 <when value="none"></when>
 		<when value="inFile"></when>
                     <when value="fromFile">
-                        <param name="constraintsFile" type="data" format="*" label="Constraints file" argument="--constraint"/>
+                        <param name="constraintsFile" type="data" format="txt" label="Constraints file" argument="--constraint"/>
                         <param name="batch" type="boolean" checked="false" truevalue="--batch" falsevalue=""
                             label="Use constraints for all alignment records"
                             help="Usually, constraints provided from input file are only applied to a single sequence alignment. Therefore, RNAalifold will stop its computation and quit after the first input alignment was processed. Using this switch, RNAfold processes all sequence alignments in the input and applies the same provided constraints to each of them."
@@ -261,7 +261,12 @@
                         <when value="notUsed">
                         </when>
                 </conditional>
-                <param argument="--motif" type="text" value="" label="Sequence structure energy" help="Specify stabilizing effect of ligand binding to a particular sequence/structure motif. Some ligands binding to RNAs require and/or induce particular sequence and structure motifs. For instance they bind to an interior loop, or small hairpin loop. If for such cases a binding free energy is known, the binding and therefore stabilizing effect of the ligand can be included in the folding recursions. Interior loop motifs are specified as concatenations of 5’ and 3’ motif, separated by an ’&amp;’ character. Energy contributions must be specified in kcal/mol."/>
+                <param argument="--motif" type="text" value="" label="Sequence structure energy" help="Specify stabilizing effect of ligand binding to a particular sequence/structure motif. Some ligands binding to RNAs require and/or induce particular sequence and structure motifs. For instance they bind to an interior loop, or small hairpin loop. If for such cases a binding free energy is known, the binding and therefore stabilizing effect of the ligand can be included in the folding recursions. Interior loop motifs are specified as concatenations of 5’ and 3’ motif, separated by an ’&amp;’ character. Energy contributions must be specified in kcal/mol.">
+                    <sanitizer>
+                        <valid initial="string.printable">
+                        </valid>
+                    </sanitizer>
+				</param>
         </section>
         <section name="IDs" title="Naming Conventions">
             <param name="auto_id"