Mercurial > repos > romaingred > pirna_pipeline

comparison piPipe.xml @ 4:bbe202c54a29 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author romaingred
date Thu, 12 Oct 2017 10:33:17 -0400
parents 02c0b9b2cc02
children f118e740e612
comparison
equal deleted inserted replaced
3:1f1b6c9b09f1 4:bbe202c54a29
73 --html $html_out 73 --html $html_out
74 --PPPon $PPPon 74 --PPPon $PPPon
75 </command> 75 </command>
76 76
77 <requirements> 77 <requirements>
78 <requirement type="package" version="3.4.0">R</requirement> 78 <requirement type="package" version="3.1.0">R</requirement>
79 <requirement type="package" version="0.7.15">bwa</requirement> 79 <requirement type="package" version="0.7.15">bwa</requirement>
80 <requirement type="package" version="2.26.0">bedTools</requirement> 80 <requirement type="package" version="2.26.0">bedtools</requirement>
81 <requirement type="package" version="1.5">samtools</requirement> 81 <requirement type="package" version="1.5">samtools</requirement>
82 </requirements> 82 </requirements>
83 83
84 <inputs> 84 <inputs>
85 <param format="fastqsanger" name="first_input" type="data" label="fastq produced by fasteris" help=""/> 85 <param format="fastqsanger" name="first_input" type="data" label="fastq produced by fasteris" help=""/>