# HG changeset patch # User romaingred # Date 1512138789 18000 # Node ID d9059a181872bd595d25004e9d6e2fd6029f7f5f # Parent 71ac58e0d5beae4c57c5d1c7b049d81d4f38594c Uploaded diff -r 71ac58e0d5be -r d9059a181872 bin/piPipe.pl --- a/bin/piPipe.pl Fri Dec 01 08:54:25 2017 -0500 +++ b/bin/piPipe.pl Fri Dec 01 09:33:09 2017 -0500 @@ -119,7 +119,7 @@ my $fastq_resized = $dir_fq.$name.'_'.$min.'-'.$max.'.fastq'; size_distribution ( $fastq[$child], $fastq_resized, $size_dir, $min, $max ); - my $sam_genome = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max.'sam'; + my $sam_genome = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max.'.sam'; my $sam_genome_unique = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max.'_unique.sam'; my $fastq_prefix = $gen_dir.$fastq_n[$child].'_'.$min.'-'.$max;