annotate tool_dependencies.xml @ 0:bdc077ef0cdd draft

planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO

<?xml version="1.0" ?>
<tool_dependency>
    <package name="numpy" version="1.9">
        <repository changeset_revision="f24fc0b630fc" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
    </package>
    <package name="fisher" version="0.1.4">
        <repository changeset_revision="07479e0cbc5f" name="package_python_2_7_fisher_0_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
    </package>
    <package name="humann2" version="0.6.1">
        <repository changeset_revision="48f412c4d0c9" name="package_humann2_0_6_1" owner="rsajulga" toolshed="https://toolshed.g2.bx.psu.edu"/>
    </package>
    <package name="goatools" version="0.6.4">
        <repository changeset_revision="25b614b3491f" name="package_goatools_0_6_4" owner="bebatut" toolshed="https://toolshed.g2.bx.psu.edu"/>
    </package>
    <package name="group_humann2_uniref_abundances_to_go" version="1.2.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://github.com/jraysajulga/group_humann2_uniref_abundances_to_GO/archive/master.zip</action>
                <action type="move_directory_files">
                    <source_directory>.</source_directory>
                    <destination_directory>$INSTALL_DIR/</destination_directory>
                </action>
                <action type="set_environment">
                    <environment_variable action="set_to" name="GROUP_UNIREF_GO_DIR">$INSTALL_DIR/</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme/>
    </package>
</tool_dependency>