# HG changeset patch # User rsajulga # Date 1555884210 14400 # Node ID 530ca330dc45930294d4002e0f6b5373dd3f5bdb # Parent 38da4106acfe574bfdab67f7c272b553fe914b05 planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO diff -r 38da4106acfe -r 530ca330dc45 group_humann2_uniref_abundances_to_go.xml --- a/group_humann2_uniref_abundances_to_go.xml Thu Apr 18 12:00:29 2019 -0400 +++ b/group_humann2_uniref_abundances_to_go.xml Sun Apr 21 18:03:30 2019 -0400 @@ -1,10 +1,8 @@ - + of UniRef50 gene families obtained (HUMAnN2 output) to Gene Ontology (GO) slim terms numpy - humann2 - goatools group_humann2_uniref_abundances_to_go @@ -101,7 +99,7 @@ HUMAnN2 is a pipeline to profile the presence/absence and abundance of microbial pathways in community of microbiota sequencing data. One output is a file with UniRef50 gene family abundances. HUMAnN2 proposes a script to regroup Uniref50 to GO, but used GO terms are too precise to get a broad overview of the ontology content. -The tool described here contains scripts to group UniRef50 abundances obtained using main HUMANn2 script (Gene families) to GO slim terms. GO slim is a subset of the terms in the whole GO. For this tool, metagenomics GO slim terms developed by Jane Lomax and the InterPro group. +The tool described here contains scripts to group UniRef50 abundances obtained using main HUMAnN2 script (Gene families) to GO slim terms. GO slim is a subset of the terms in the whole GO. For this tool, metagenomics GO slim terms developed by Jane Lomax and the InterPro group. More information on `dedicated GitHub repository `_.