Mercurial > repos > rsajulga > group_humann2_uniref_abundances_to_go

changeset 1:fcc46fdac26b draft

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planemo upload for repository https://github.com/ASaiM/galaxytools/tree/master/tools/group_humann2_uniref_abundances_to_GO
author rsajulga
date Fri, 08 Mar 2019 15:21:47 -0500
parents bdc077ef0cdd
children b05bd4bbb376
files group_humann2_uniref_abundances_to_go.xml tool_dependencies.xml
diffstat 2 files changed, 8 insertions(+), 12 deletions(-) [+]
line wrap: on
line diff
--- a/group_humann2_uniref_abundances_to_go.xml	Fri Mar 08 15:04:11 2019 -0500
+++ b/group_humann2_uniref_abundances_to_go.xml	Fri Mar 08 15:21:47 2019 -0500
@@ -1,11 +1,10 @@
-<tool id="group_humann2_uniref_abundances_to_go" name="Group abundances" version="1.2.3">
+<tool id="group_humann2_uniref_abundances_to_go" name="Group abundances" version="1.2.0">
     <description> of UniRef50 gene families obtained (HUMAnN2 output) to Gene Ontology (GO) slim terms</description>
 
     <requirements>
         <requirement type="package" version="1.9">numpy</requirement>
         <requirement type="package" version="0.6.1">humann2</requirement>
         <requirement type="package" version="0.6.4">goatools</requirement>
-        <requirement type="package" version="0.1.4">fisher</requirement>
         <requirement type="package" version="1.2.0">group_humann2_uniref_abundances_to_go</requirement>
     </requirements>
 
--- a/tool_dependencies.xml	Fri Mar 08 15:04:11 2019 -0500
+++ b/tool_dependencies.xml	Fri Mar 08 15:21:47 2019 -0500
@@ -1,21 +1,18 @@
-<?xml version="1.0" ?>
+<?xml version="1.0"?>
 <tool_dependency>
     <package name="numpy" version="1.9">
-        <repository changeset_revision="f24fc0b630fc" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
-    </package>
-    <package name="fisher" version="0.1.4">
-        <repository changeset_revision="07479e0cbc5f" name="package_python_2_7_fisher_0_1_4" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"/>
+        <repository changeset_revision="57b37f63cb84" name="package_python_2_7_numpy_1_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="humann2" version="0.6.1">
-        <repository changeset_revision="48f412c4d0c9" name="package_humann2_0_6_1" owner="rsajulga" toolshed="https://toolshed.g2.bx.psu.edu"/>
+        <repository changeset_revision="655e87ac3364" name="package_humann2_0_6_1" owner="bebatut" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="goatools" version="0.6.4">
-        <repository changeset_revision="25b614b3491f" name="package_goatools_0_6_4" owner="bebatut" toolshed="https://toolshed.g2.bx.psu.edu"/>
+        <repository changeset_revision="25b614b3491f" name="package_goatools_0_6_4" owner="bebatut" toolshed="https://toolshed.g2.bx.psu.edu" />
     </package>
     <package name="group_humann2_uniref_abundances_to_go" version="1.2.0">
         <install version="1.0">
             <actions>
-                <action type="download_by_url">https://github.com/jraysajulga/group_humann2_uniref_abundances_to_GO/archive/master.zip</action>
+                <action type="download_by_url">https://github.com/ASaiM/group_humann2_uniref_abundances_to_GO/archive/v1.2.0.zip</action>
                 <action type="move_directory_files">
                     <source_directory>.</source_directory>
                     <destination_directory>$INSTALL_DIR/</destination_directory>
@@ -26,6 +23,6 @@
                 </action>
             </actions>
         </install>
-        <readme/>
+        <readme />
     </package>
-</tool_dependency>
\ No newline at end of file
+</tool_dependency>