Mercurial > repos > ryanmorin > nextgen_variant_identification

diff SNV/filter_snvmix_somatic.py @ 6:361d6506850a

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Uploaded
author ryanmorin
date Tue, 18 Oct 2011 18:32:07 -0400
parents 74f5ea818cea
children
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--- a/SNV/filter_snvmix_somatic.py	Mon Oct 17 14:57:09 2011 -0400
+++ b/SNV/filter_snvmix_somatic.py	Tue Oct 18 18:32:07 2011 -0400
@@ -17,7 +17,7 @@
 import pkg_resources; pkg_resources.require( "bx-python" )
 from bx.cookbook import doc_optparse
 import re
-
+os.environ['LC_COLLATE'] = 'C'
 def stop_err( msg ):
     sys.stderr.write( '%s\n' % msg )
     sys.exit()