Mercurial > repos > ryo-tas > package_macs_1_4_2
comparison tool_dependencies.xml @ 1:58e7660968d9 default tip
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| author | ryo_tas <yamanaka@genome.rcast.u-tokyo.ac.jp> |
|---|---|
| date | Tue, 23 Dec 2014 18:31:54 +0900 |
| parents | b1f4fd29629a |
| children |
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| 0:b1f4fd29629a | 1:58e7660968d9 |
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| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="macs14" version="1.4.2"> | 3 <package name="macs14" version="1.4.2"> |
| 4 <install version="1.0"> | 4 <install version="1.0"> |
| 5 <actions> | 5 <actions> |
| 6 <action type="download_by_url">https://github.com/downloads/taoliu/MACS/MACS-1.4.2-1.tar.gz</action> | 6 <action type="download_by_url">http://download.pitagora-galaxy.org/package/source/MACS-1.4.2-1.tar.gz</action> |
| 7 <action type="shell_command">export PYTHONPATH=$INSTALL_DIR/lib/python && python setup.py install --prefix $INSTALL_DIR --install-lib $INSTALL_DIR/lib/python</action> | 7 <action type="shell_command">export PYTHONPATH=$INSTALL_DIR/lib/python && python setup.py install --prefix $INSTALL_DIR --install-lib $INSTALL_DIR/lib/python</action> |
| 8 <action type="set_environment"> | 8 <action type="set_environment"> |
| 9 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> | 9 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python</environment_variable> |
| 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python/site-packages</environment_variable> | 10 <environment_variable name="PYTHONPATH" action="prepend_to">$INSTALL_DIR/lib/python/site-packages</environment_variable> |
| 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> | 11 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> |