Mercurial > repos > s-kaufmann > synteny_mapper
view synteny_mapper/tool_dependencies.xml @ 4:1897416e777a draft
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author | s-kaufmann |
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date | Mon, 28 Apr 2014 11:05:40 -0400 |
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<?xml version="1.0"?> <tool_dependency> <set_environment version="1.0"> <environment_variable name="JAR_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> </set_environment> <set_environment version="1.0"> <environment_variable name="CIRCOS_SCRIPT_PATH" action="set_to">$REPOSITORY_INSTALL_DIR</environment_variable> </set_environment> <package name="circos" version="0.64"> <install version="1.0"> <actions> <!-- Downloads the Circos software from its website and unpacks it --> <action type="download_by_url">http://circos.ca/distribution/circos-0.64.tgz </action> <action type="move_directory_files"> <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR/</destination_directory> </action> <action type="set_environment"> <environment_variable name="CIRCOS_PATH" action="set_to">$INSTALL_DIR</environment_variable> </action> </actions> </install> <readme> Downloads and installs Circos (v.0.64) for use in visualization. Requires perl to be installed. </readme> </package> </tool_dependency>