comparison micropita_galaxy_ReadMe.txt @ 0:0de566f21448 draft default tip

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author sagun98
date Thu, 03 Jun 2021 18:13:32 +0000
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1 #Installation instructions for microPITA in a galaxy environment.
2 These instructions require the Mercurial versioning system, galaxy, and an internet connection.
3
4 #For general reference about microPita please refer to:
5 ```
6 https://bitbucket.org/biobakery/micropita
7 ```
8
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12 #Installation Instructions
13 In the "galaxy-dist/tools" directory install micropita by typing in a terminal:
14 ```
15 hg clone https://bitbucket.org/biobakery/micropita
16 ```
17
18
19 Update member tool_conf.xml in the galaxy directory adding the following:
20 ```
21 <section name="micropita" id="micropita">
22 <tool file="micropita/galaxy/micropita.xml"/>
23 </section>
24 ```
25
26 Update member datatypes_conf.xml in the galaxy directory adding the following:
27 ```
28 <datatype extension="micropita" type="galaxy.datatypes.data:Text" subclass="true" display_in_upload="true"/>
29 ```
30
31 Copy the 2 *.png members to /galaxy/static/images
32
33 Recycle galaxy
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