Mercurial > repos > sagun98 > micropita_v2
comparison micropita_galaxy_ReadMe.txt @ 0:0de566f21448 draft default tip
v2
author | sagun98 |
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date | Thu, 03 Jun 2021 18:13:32 +0000 |
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-1:000000000000 | 0:0de566f21448 |
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1 #Installation instructions for microPITA in a galaxy environment. | |
2 These instructions require the Mercurial versioning system, galaxy, and an internet connection. | |
3 | |
4 #For general reference about microPita please refer to: | |
5 ``` | |
6 https://bitbucket.org/biobakery/micropita | |
7 ``` | |
8 | |
9 | |
10 | |
11 | |
12 #Installation Instructions | |
13 In the "galaxy-dist/tools" directory install micropita by typing in a terminal: | |
14 ``` | |
15 hg clone https://bitbucket.org/biobakery/micropita | |
16 ``` | |
17 | |
18 | |
19 Update member tool_conf.xml in the galaxy directory adding the following: | |
20 ``` | |
21 <section name="micropita" id="micropita"> | |
22 <tool file="micropita/galaxy/micropita.xml"/> | |
23 </section> | |
24 ``` | |
25 | |
26 Update member datatypes_conf.xml in the galaxy directory adding the following: | |
27 ``` | |
28 <datatype extension="micropita" type="galaxy.datatypes.data:Text" subclass="true" display_in_upload="true"/> | |
29 ``` | |
30 | |
31 Copy the 2 *.png members to /galaxy/static/images | |
32 | |
33 Recycle galaxy | |
34 |