# HG changeset patch
# User saharlcc
# Date 1491256718 14400
# Node ID 72e55a2c0bbf1776fb1f8791d791984e0ddc24ef
# Parent  491a5e3e4b78ef7caf1dc3b8d3e04fc640197218
Bug fix in output files headers

diff -r 491a5e3e4b78 -r 72e55a2c0bbf isoem2_isode2/isoDE2.sh
--- a/isoem2_isode2/isoDE2.sh	Mon Apr 03 17:55:43 2017 -0400
+++ b/isoem2_isode2/isoDE2.sh	Mon Apr 03 17:58:38 2017 -0400
@@ -141,7 +141,7 @@
 date
 
 
-awk '{if (NR == 1) {print "Gene ID\tConservative log2 FC\t Single run log2 FC\t c1 average FPKM\tc2 average FPKM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}' Bootstrap_Merge1_DIR/output.txt > ${geneFPKMout_file}
+awk '{if (NR == 1) {print "Gene ID\tConfident log2 FC\t Single run log2 FC\t c1 average FPKM\tc2 average FPKM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}' Bootstrap_Merge1_DIR/output.txt > ${geneFPKMout_file}
 
 cd ..
 
@@ -164,7 +164,7 @@
 echo awk command
 date
 pwd
-awk '{if (NR == 1) {print "Isoform ID\tConservative log2 FC\t Single run log2 FC\t c1 average FPKM\tc2 average FPKM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}' Bootstrap_Merge1_DIR/output.txt  > ${isoFPKMout_file}
+awk '{if (NR == 1) {print "Isoform ID\tConfident log2 FC\t Single run log2 FC\t c1 average FPKM\tc2 average FPKM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}' Bootstrap_Merge1_DIR/output.txt  > ${isoFPKMout_file}
 cd ..
 
 
@@ -184,7 +184,7 @@
 echo awk command
 date
 pwd
-awk '{if (NR == 1) {print "Gene ID\tConservative log2 FC\t Single run log2 FC\t c1 average TPM\tc2 average TPM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}'  Bootstrap_Merge1_DIR/output.txt  > ${geneTPMout_file}
+awk '{if (NR == 1) {print "Gene ID\tConfident log2 FC\t Single run log2 FC\t c1 average TPM\tc2 average TPM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}'  Bootstrap_Merge1_DIR/output.txt  > ${geneTPMout_file}
 cd ..
 
 
@@ -204,7 +204,7 @@
 echo awk command
 date
 
-awk '{if (NR == 1) {print "Conservative Isoform ID\tConfident log2 FC\t Single run log2 FC\t c1 average TPM\tc2 average TPM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}'  Bootstrap_Merge1_DIR/output.txt  > ${isoTPMout_file}
+awk '{if (NR == 1) {print "Isoform ID\tConfident log2 FC\t Single run log2 FC\t c1 average TPM\tc2 average TPM";} else {if ($6 == 0 && $7 == 0) {two="0";} else {two=$2;} print $1 "\t" two "\t"  $5 "\t" $6 "\t" $7}}'  Bootstrap_Merge1_DIR/output.txt  > ${isoTPMout_file}
 
 cd ..