annotate mutationassesor_web/README.rst @ 0:e51722489ddb draft default tip

Uploaded
author saket-choudhary
date Tue, 07 Oct 2014 19:40:29 -0400
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
1 Galaxy wrapper for the Mutation Assessor webservice
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
2 ===================================================
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
3
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
4 This tool is copyright 2014 by Saket Choudhary<saketkc@gmail.com>, Indian Institute of Technology Bombay
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
5 All rights reserved. MIT licensed.
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
6
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
7 Licence (MIT)
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
8 =============
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
9
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
10 Permission is hereby granted, free of charge, to any person obtaining a copy
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
11 of this software and associated documentation files (the "Software"), to deal
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
12 in the Software without restriction, including without limitation the rights
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
13 to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
14 copies of the Software, and to permit persons to whom the Software is
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
15 furnished to do so, subject to the following conditions:
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
16
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
17 The above copyright notice and this permission notice shall be included in
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
18 all copies or substantial portions of the Software.
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
19
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
20 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
21 IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
22 FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
23 AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
24 LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
25 OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
26 THE SOFTWARE.
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
27
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
28 Citations
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
29 ===========
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
30
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
31
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
32 If you use this Galaxy tool in work leading to a scientific publication please cite:
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
33
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
34 Reva B, Antipin Y, Sander C. Nucleic Acids Research (2011) "Predicting the Functional Impact of Protein Mutations: Application to Cancer Genomics"
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
35
e51722489ddb Uploaded
saket-choudhary
parents:
diff changeset
36 Reva, B.A., Antipin, Y.A. and Sander, C. (2007) Genome Biol, 8, R232. "Determinants of protein function revealed by combinatorial entropy optimization"