Mercurial > repos > saket-choudhary > polyphen2_web

comparison polyphen2_web/test-data/polyphen2_log.txt @ 0:09f68bdd1999 draft default tip

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author saket-choudhary
date Tue, 07 Oct 2014 19:21:15 -0400
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-1:000000000000 0:09f68bdd1999
1 ===========================
2 Stage 1/7: Validating input
3 ===========================
4 No errors
5
6 ===============================
7 Stage 2/7: Mapping genomic SNPs
8 ===============================
9 WARNING: (chr22:40814500 - uc003ayv.1) None of the input alleles (A/G) matches reference allele (T)
10 WARNING: (chr22:40814500 - uc003ayw.1) None of the input alleles (A/G) matches reference allele (T)
11 WARNING: (chr22:40814500 - uc010gye.1) None of the input alleles (A/G) matches reference allele (T)
12 WARNING: (chr22:40814500 - uc010gyf.1) None of the input alleles (A/G) matches reference allele (T)
13 Total errors/warnings: 4
14
15 ============================
16 Stage 3/7: Collecting output
17 ============================
18 No errors
19
20 ===============================================
21 Stage 4/7: Building MSA and annotating proteins
22 ===============================================
23 No errors
24
25 ============================
26 Stage 5/7: Collecting output
27 ============================
28 No errors
29
30 =====================
31 Stage 6/7: Predicting
32 =====================
33 No errors
34
35 =============================
36 Stage 7/7: Generating reports
37 =============================
38 No errors