Mercurial > repos > saskia-hiltemann > ireport
comparison iReport.sh @ 2:e8755431a0cd draft
fixed missing dependencies
| author | saskia-hiltemann |
|---|---|
| date | Tue, 30 Sep 2014 09:47:14 -0400 |
| parents | 440f4aa3db97 |
| children | 4a6ebda2a3ae |
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| 1:440f4aa3db97 | 2:e8755431a0cd |
|---|---|
| 1 #!/bin/bash | 1 #!/bin/bash |
| 2 repositorypath="/mnt/galaxyTools/shed_tools/toolshed.nbic.nl/repos/saskia-hiltemann/ireport/71dc132e9bb2/ireport" # TODO: dependency | 2 #repositorypath="/mnt/galaxyTools/shed_tools/toolshed.nbic.nl/repos/saskia-hiltemann/ireport/71dc132e9bb2/ireport" # TODO: dependency |
| 3 source "${repositorypath}/createHTML.sh" | 3 source "${repositorypath}/createHTML.sh" |
| 4 | 4 |
| 5 echo "allparams: $@" | 5 echo "allparams: $@" |
| 6 function usage() { echo "Oops!"; } | 6 function usage() { echo "Oops!"; } |
| 7 | 7 |
| 13 [ $# -eq 0 ] && usage | 13 [ $# -eq 0 ] && usage |
| 14 | 14 |
| 15 while [ $# -gt 0 ] | 15 while [ $# -gt 0 ] |
| 16 do | 16 do |
| 17 case "$1" in | 17 case "$1" in |
| 18 --toolpath) repositorypath=$2;shift;; | 18 --toolpath) repositorypath=$2;shift;; |
| 19 --galaxypath) galaxypath=$2;shift;; | 19 --galaxypath) galaxypath=$2;shift;; |
| 20 --minwidth) minwidth=$2;shift;; | 20 --minwidth) minwidth=$2;shift;; |
| 21 --tab) tabs+=",$2";shift;; | 21 --tab) tabs+=",$2";shift;; |
| 22 --item) items+=",$2";shift;; | 22 --item) items+=",$2";shift;; |
| 23 --htmlout) htmlout=$2;shift;; | 23 --htmlout) htmlout=$2;shift;; |
| 24 --label) title="$@";shift;; | 24 --label) title="$@";shift;; |