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comparison MetaMa_tpl.html @ 0:1024245abc70 draft

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planemo upload for repository https://github.com/sblanck/smagexp/tree/master/smagexp_tools commit 5974f806f344dbcc384b931492d7f023bfbbe03b
author sblanck
date Thu, 22 Feb 2018 08:38:22 -0500
parents
children 3ce32282f6a4
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-1:000000000000 0:1024245abc70
1 <!DOCTYPE html>
2 <html>
3 <head>
4 <meta http-equiv="Content-type" content="text/html; charset=utf-8">
5 <meta name="viewport" content="width=device-width,initial-scale=1">
6 <title>DataTables example - Ajax sourced data</title>
7 <link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/1.10.10/css/jquery.dataTables.min.css">
8 <link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/buttons/1.1.0/css/buttons.dataTables.min.css">
9
10 <!--link rel="stylesheet" type="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.6/css/bootstrap.min.css">
11 <link rel="stylesheet" type="https://cdn.datatables.net/1.10.11/css/dataTables.bootstrap.min.css"-->
12
13 <style type="text/css" class="init">
14
15 td.details-control {
16 background: url('../../../static/images/fugue/toggle-expand.png') no-repeat center center;
17 cursor: pointer;
18 }
19 tr.shown td.details-control {
20 background: url('../../../static/images/fugue/toggle.png') no-repeat center center;
21 }
22
23 .dataTable th,.dataTable td {
24
25 text-overflow: ellipsis;
26 max-width: 200px;
27 min-width: 40px;
28 -o-text-overflow: ellipsis;
29 -ms-text-overflow: ellipsis;
30 -moz-text-overflow: ellipsis;
31 width: 100px;
32 white-space:nowrap;
33 overflow: hidden;
34
35
36 padding: 10px;
37
38 }
39
40
41 </style>
42
43 <script type="text/javascript" language="javascript" src="https://code.jquery.com/jquery-1.12.0.min.js">
44 </script>
45 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.11/js/jquery.dataTables.min.js">
46 </script>
47 <!--script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.11/js/dataTables.bootstrap.min.js">
48 </script-->
49 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/dataTables.buttons.min.js">
50 </script>
51 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.flash.min.js">
52 </script>
53 <script type="text/javascript" language="javascript" src="https://cdnjs.cloudflare.com/ajax/libs/jszip/2.5.0/jszip.min.js">
54 </script>
55 <script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/pdfmake.min.js">
56 </script>
57 <script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/vfs_fonts.js">
58 </script>
59 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.html5.min.js">
60 </script>
61 <script type="text/javascript" class="init">
62
63
64
65 function format ( d ) {
66 // `d` is the original data object for the row
67 var test=d[6].split("///");
68 var strLength=test.length;
69 var result="";
70 for (var i=0;i<strLength;i++) {
71 result=result+'<a href="http://amigo.geneontology.org/amigo/term/'+test[i]+'">'+test[i]+'</a>'+',&nbsp';
72 }
73 return '<table cellpadding="5" cellspacing="0" border="0" style="padding-left:50px;">'+
74 '<tr>'+
75 '<td>Gene Symbol:</td>'+
76 '<td style="width:100%;overflow: hidden;white-space: normal;">'+'<a href="http://www.ncbi.nlm.nih.gov/gene/'+d[4]+'">'+d[2]+'</a>'+'</td>'+
77 '</tr>'+
78 '<tr>'+
79 '<td>Gene Title:</td>'+
80 '<td style="width:100%;overflow: hidden;white-space: normal;">'+d[3]+'</td>'+
81 '</tr>'+
82 '<tr>'+
83 '<td>GO Function ID:</td>'+
84 '<td style="width:100%;overflow: hidden;white-space: normal;">'+result+'</td>'+
85 '</tr>'+
86 '</table>';
87 }
88
89 var dataSet=###DATAJSON###;
90 var summarySet=###SUMMARYJSON###;
91
92 $(document).ready(function() {
93 var table = $('#example').DataTable( {
94 "scrollX": true,
95 data: dataSet,
96 "columns": [
97 {
98 "className": 'details-control',
99 "orderable": false,
100 "data": null,
101 "defaultContent": ''
102 },
103 {title : "ID" },
104 {title : "Gene_symbol"},
105 {title : "Gene_title"},
106 {title : "Gene_ID"},
107 {title : "Chromosome_annotation"},
108 {title : "GO_Function_ID"}
109
110 ],
111
112 dom: 'Bfrtlip',
113 buttons: [
114 'copy', 'csv', 'excel'
115 ]
116
117 } );
118
119 // Add event listener for opening and closing details
120 $('#example tbody').on('click', 'td.details-control', function () {
121 var tr = $(this).closest('tr');
122 var row = table.row( tr );
123
124 if ( row.child.isShown() ) {
125 // This row is already open - close it
126 row.child.hide();
127 tr.removeClass('shown');
128 }
129 else {
130 // Open this row
131 row.child( format(row.data()) ).show();
132 tr.addClass('shown');
133 }
134 } );
135 } );
136
137
138
139 $(document).ready(function() {
140 $('#summary').DataTable( {
141 "columnDefs": [
142 { className: "dt-center", targets: '_all' }
143 ],
144 "paging": false,
145 "ordering": false,
146 "info": false,
147 "searching": false,
148 data: summarySet,
149 "columns": [
150 {title : "DE" },
151 {title : "IDD" },
152 {title : "Loss" },
153 {title : "IDR" },
154 {title : "IRR" },
155
156
157 ],
158
159 } );
160 } );
161
162
163
164 </script>
165 </head>
166
167 <body>
168
169 <table><tr><td>
170 <h2>Venn diagram</h2>
171 <img src='###VENN###' height="400" width="400"><br/>
172 </td><td>
173
174 </td></tr></table>
175
176 <h2>Summary</h2>
177 <table id="summary" class="compact stripe row-border" cellspacing="0" width="100%"> </table>
178 </br>
179 DE : Number of differentially expressed genes </br>
180 IDD (Integration Driven discoveries) : number of genes that are declared DE in the meta-analysis that were not identified in any of the individual studies alone</br>
181 Loss : Number of genes that are identified DE in individual studies but not in meta-analysis </br>
182 IDR (Integration-driven Discovery Rate) : corresponding proportions of IDD </br>
183 IRR (Integration-driven Revision) : corresponding proportions of Loss</br>
184 <h2>Details</h2>
185 <table id="example" class="compact stripe row-border" cellspacing="0" width="100%">
186 </table>
187 </body>
188 </html>