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comparison MetaRNASeq_tpl.html @ 0:1024245abc70 draft

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planemo upload for repository https://github.com/sblanck/smagexp/tree/master/smagexp_tools commit 5974f806f344dbcc384b931492d7f023bfbbe03b
author sblanck
date Thu, 22 Feb 2018 08:38:22 -0500
parents
children 3ce32282f6a4
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-1:000000000000 0:1024245abc70
1 <!DOCTYPE html>
2 <html>
3 <head>
4 <meta http-equiv="Content-type" content="text/html; charset=utf-8">
5 <meta name="viewport" content="width=device-width,initial-scale=1">
6 <title>DataTables example - Ajax sourced data</title>
7 <link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/1.10.10/css/jquery.dataTables.min.css">
8 <link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/buttons/1.1.0/css/buttons.dataTables.min.css">
9
10 <!--link rel="stylesheet" type="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.6/css/bootstrap.min.css">
11 <link rel="stylesheet" type="https://cdn.datatables.net/1.10.11/css/dataTables.bootstrap.min.css"-->
12
13 <style type="text/css" class="init">
14
15 td.details-control {
16 background: url('../../../static/images/fugue/toggle-expand.png') no-repeat center center;
17 cursor: pointer;
18 }
19 tr.shown td.details-control {
20 background: url('../../../static/images/fugue/toggle.png') no-repeat center center;
21 }
22
23 .dataTable th,.dataTable td {
24
25 text-overflow: ellipsis;
26 max-width: 200px;
27 min-width: 40px;
28 -o-text-overflow: ellipsis;
29 -ms-text-overflow: ellipsis;
30 -moz-text-overflow: ellipsis;
31 width: 100px;
32 white-space:nowrap;
33 overflow: hidden;
34
35
36 padding: 10px;
37
38 }
39
40
41 </style>
42
43 <script type="text/javascript" language="javascript" src="https://code.jquery.com/jquery-1.12.0.min.js">
44 </script>
45 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.11/js/jquery.dataTables.min.js">
46 </script>
47 <!--script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.11/js/dataTables.bootstrap.min.js">
48 </script-->
49 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/dataTables.buttons.min.js">
50 </script>
51 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.flash.min.js">
52 </script>
53 <script type="text/javascript" language="javascript" src="https://cdnjs.cloudflare.com/ajax/libs/jszip/2.5.0/jszip.min.js">
54 </script>
55 <script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/pdfmake.min.js">
56 </script>
57 <script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/vfs_fonts.js">
58 </script>
59 <script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.html5.min.js">
60 </script>
61 <script type="text/javascript" class="init">
62
63 var dataSet=###DATAJSON###;
64 var fishsummarySet=###FISHSUMMARYJSON###;
65 var invsummarySet=###INVSUMMARYJSON###;
66
67 $(document).ready(function() {
68 var table = $('#example').DataTable( {
69 "scrollX": true,
70 data: dataSet,
71 "columns": [
72 {title : "ID" },
73 {title : "Fishercomb" },
74 {title : "Invnormcomb" },
75 {title : "Sign" },
76 ],
77 "order": [[0, 'asc']],
78 dom: 'Bfrtlip',
79 buttons: [
80 'copy', 'csv', 'excel'
81 ]
82
83 } );
84
85 } );
86
87
88
89 $(document).ready(function() {
90 $('#fishsummary').DataTable( {
91 "columnDefs": [
92 { className: "dt-center", targets: '_all' }],
93 "paging": false,
94 "ordering": false,
95 "info": false,
96 "searching": false,
97 data: fishsummarySet,
98 "columns": [
99 {title : "DE" },
100 {title : "IDD" },
101 {title : "Loss" },
102 {title : "IDR" },
103 {title : "IRR" }
104
105
106 ]
107
108 } );
109 } );
110
111 $(document).ready(function() {
112 $('#invsummary').DataTable( {
113 "columnDefs": [
114 { className: "dt-center", targets: '_all' }
115 ],
116 "paging": false,
117 "ordering": false,
118 "info": false,
119 "searching": false,
120 data: invsummarySet,
121 "columns": [
122 {title : "DE" },
123 {title : "IDD" },
124 {title : "Loss" },
125 {title : "IDR" },
126 {title : "IRR" }
127
128
129 ]
130
131 } );
132 } );
133
134
135
136 </script>
137 </head>
138
139 <body>
140
141 <table><tr><td>
142 <h2>Venn diagram</h2>
143 <img src='###VENN###' height="400" width="400"><br/>
144 </td><td>
145
146 </td></tr></table>
147
148 <h2>Fisher combination summary</h2>
149 <table id="fishsummary" class="compact stripe row-border" cellspacing="0" width="100%"> </table>
150 </br>
151
152 <h2>Invnorm combination summary</h2>
153 <table id="invsummary" class="compact stripe row-border" cellspacing="0" width="100%"> </table>
154 </br>
155 DE : Number of differentially expressed genes </br>
156 IDD (Integration Driven discoveries) : number of genes that are declared DE in the meta-analysis that were not identifed in any of the individual studies alone</br>
157 Loss : Number of genes that are identified DE in individual studies but not in meta-analysis </br>
158 IDR (Integration-driven Discovery Rate) : corresponding proportions of IDD </br>
159 IRR (Integration-driven Revision) : corresponding proportions of Loss</br>
160 <!--h2>Details</h2-->
161
162
163
164 <!--table id="example" class="compact stripe row-border" cellspacing="0" width="100%">
165 </table-->
166 </body>
167 </html>