Mercurial > repos > sblanck > smagexp

<!DOCTYPE html>
<html>
<head>
	<meta http-equiv="Content-type" content="text/html; charset=utf-8">
	<meta name="viewport" content="width=device-width,initial-scale=1">
	<title>DataTables example - Ajax sourced data</title>
	<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/1.10.10/css/jquery.dataTables.min.css">
	<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/buttons/1.1.0/css/buttons.dataTables.min.css">

    <!--link rel="stylesheet" type="https://maxcdn.bootstrapcdn.com/bootstrap/3.3.6/css/bootstrap.min.css">
    <link rel="stylesheet" type="https://cdn.datatables.net/1.10.11/css/dataTables.bootstrap.min.css"-->

	<style type="text/css" class="init">

td.details-control {
    background: url('../../../static/images/fugue/toggle-expand.png') no-repeat center center;
    cursor: pointer;
}
tr.shown td.details-control {
    background: url('../../../static/images/fugue/toggle.png') no-repeat center center;
}

	.dataTable th,.dataTable td {

	text-overflow: ellipsis;
	max-width: 200px;
	min-width: 40px;
    	-o-text-overflow: ellipsis;
    	-ms-text-overflow: ellipsis;
    	-moz-text-overflow: ellipsis;
	width: 100px;
	white-space:nowrap;
	overflow: hidden;


	padding: 10px;

}


	</style>

	<script type="text/javascript" language="javascript" src="https://code.jquery.com/jquery-1.12.0.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.11/js/jquery.dataTables.min.js">
	</script>
	<!--script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.11/js/dataTables.bootstrap.min.js">
	</script-->
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/dataTables.buttons.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.flash.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdnjs.cloudflare.com/ajax/libs/jszip/2.5.0/jszip.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/pdfmake.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/vfs_fonts.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.html5.min.js">
	</script>
	<script type="text/javascript" class="init">


function format ( d ) {
    // `d` is the original data object for the row
    var test=d[6].split("///");
    var strLength=test.length;
    var result="";
    for (var i=0;i<strLength;i++) {
    	result=result+'<a href="http://amigo.geneontology.org/amigo/term/'+test[i]+'">'+test[i]+'</a>'+',&nbsp';
    }
    return '<table cellpadding="5" cellspacing="0" border="0" style="padding-left:50px;">'+
        '<tr>'+
            '<td>Gene Symbol:</td>'+
            '<td style="width:100%;overflow: hidden;white-space: normal;">'+'<a href="http://www.ncbi.nlm.nih.gov/gene/'+d[4]+'">'+d[2]+'</a>'+'</td>'+
        '</tr>'+
        '<tr>'+
            '<td>Gene Title:</td>'+
            '<td style="width:100%;overflow: hidden;white-space: normal;">'+d[3]+'</td>'+
        '</tr>'+
        '<tr>'+
            '<td>GO Function ID:</td>'+
            '<td style="width:100%;overflow: hidden;white-space: normal;">'+result+'</td>'+
        '</tr>'+
    '</table>';
}

var dataSet=###DATAJSON###;
var summarySet=###SUMMARYJSON###;

$(document).ready(function() {
        var table = $('#example').DataTable( {
	"scrollX": true,
	data: dataSet,
        "columns": [
            {
                "className":      'details-control',
                "orderable":      false,
                "data":           null,
                "defaultContent": ''
            },
        {title : "ID" },
        {title : "Gene_symbol"},
        {title : "Gene_title"},
        {title : "Gene_ID"},
	    {title : "Chromosome_annotation"},
	    {title : "GO_Function_ID"}

        ],

	dom: 'Bfrtlip',
	buttons: [
            'copy', 'csv', 'excel'
        ]

    } );

    // Add event listener for opening and closing details
    $('#example tbody').on('click', 'td.details-control', function () {
        var tr = $(this).closest('tr');
        var row = table.row( tr );

        if ( row.child.isShown() ) {
            // This row is already open - close it
            row.child.hide();
            tr.removeClass('shown');
        }
        else {
            // Open this row
            row.child( format(row.data()) ).show();
            tr.addClass('shown');
        }
    } );
} );


$(document).ready(function() {
    $('#summary').DataTable( {
         "columnDefs": [
    { className: "dt-center", targets: '_all' }
  ],
        "paging":   false,
        "ordering": false,
        "info":     false,
        "searching": false,
        data: summarySet,
        "columns": [
            {title : "DE" },
            {title : "IDD" },
            {title : "Loss" },
            {title : "IDR" },
	    {title : "IRR" },


        ],

    } );
} );


	</script>
</head>

<body>

<table><tr><td>
<h2>Venn diagram</h2>
<img src='###VENN###'  height="400" width="400"><br/>
</td><td>

</td></tr></table>

<h2>Summary</h2>
<table id="summary" class="compact stripe row-border" cellspacing="0" width="100%">  </table>
</br>
DE : Number of differentially expressed genes </br>
IDD (Integration  Driven  discoveries) : number of genes that are declared DE in the meta-analysis that were not identified in any of the individual studies alone</br>
Loss : Number of genes that are identified DE in individual studies but not in meta-analysis </br>
IDR (Integration-driven Discovery Rate) : corresponding proportions of IDD </br>
IRR (Integration-driven Revision) : corresponding proportions of Loss</br>
<h2>Details</h2>
<table id="example" class="compact stripe row-border" cellspacing="0" width="100%">
</table>
</body>
</html>
author	sblanck
date	Thu, 22 Feb 2018 10:10:34 -0500
parents	1024245abc70
children	3ce32282f6a4