Mercurial > repos > sblanck > smagexp

<!DOCTYPE html>
<html>
<head>
	<meta http-equiv="Content-type" content="text/html; charset=utf-8">
	<meta name="viewport" content="width=device-width,initial-scale=1">
	<title>Limma analysis results</title>
	<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/1.10.10/css/jquery.dataTables.min.css">
	<link rel="stylesheet" type="text/css" href="https://cdn.datatables.net/buttons/1.1.0/css/buttons.dataTables.min.css">
	<style type="text/css" class="init">

td.details-control {
    background: url('../../../static/images/fugue/toggle-expand.png') no-repeat center center;
    cursor: pointer;
}
tr.shown td.details-control {
    background: url('../../../static/images/fugue/toggle.png') no-repeat center center;
}

	.dataTable th,.dataTable td {

	text-overflow: ellipsis;
	max-width: 200px;
	min-width: 40px;
    	-o-text-overflow: ellipsis;
    	-ms-text-overflow: ellipsis;
    	-moz-text-overflow: ellipsis;
	width: 100px;
	white-space:nowrap;
	overflow: hidden;


	padding: 10px;

}
	.details th,.details td {

	max-width: 1500px;
	min-width: 1000px;
	padding: 10px;

}


	</style>
	<style>


	</style>

	<script type="text/javascript" language="javascript" src="https://code.jquery.com/jquery-1.11.3.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/1.10.10/js/jquery.dataTables.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/dataTables.buttons.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.flash.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdnjs.cloudflare.com/ajax/libs/jszip/2.5.0/jszip.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/pdfmake.min.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.rawgit.com/bpampuch/pdfmake/0.1.18/build/vfs_fonts.js">
	</script>
	<script type="text/javascript" language="javascript" src="https://cdn.datatables.net/buttons/1.1.0/js/buttons.html5.min.js">
	</script>
	<script type="text/javascript" class="init">


function format ( d ) {
    // `d` is the original data object for the row
    var test=d[11].split("///");
    var strLength=test.length;
    var result="";
    for (var i=0;i<strLength;i++) {
    	result=result+'<a href="http://amigo.geneontology.org/amigo/term/'+test[i]+'">'+test[i]+'</a>'+',&nbsp';
    }
    return '<table cellpadding="5" cellspacing="0" border="0" style="padding-left:50px;">'+
        '<tr>'+
            '<td>Gene Symbol:</td>'+
            '<td style="width:100%;overflow: hidden;white-space: normal;">'+'<a href="http://www.ncbi.nlm.nih.gov/gene/'+d[9]+'">'+d[7]+'</a>'+'</td>'+
            '</tr>'+
        '<tr>'+
            '<td>Gene Title:</td>'+
            '<td style="width:100%;overflow: hidden;white-space: normal;">'+d[8]+'</td>'+
        '</tr>'+
        '<tr>'+
            '<td>GO Function ID:</td>'+
            '<td style="width:100%;overflow: hidden;white-space: normal;">'+result+'</td>'+
        '</tr>'+
    '</table>';
}

var dataSet=###DATAJSON###;

$(document).ready(function() {
    var table = $('#example').DataTable( {
	"scrollX": true,
	data: dataSet,
        "columns": [
            {
                "className":      'details-control',
                "orderable":      false,
                "data":           null,
                "defaultContent": ''
            },
            {title : "ID" },
            {title : "adj_P_Val" },
            {title : "P_Value" },
            {title : "t" },
	    {title : "B" },
	    {title : "logFC" },
	    {title : "Gene_symbol"},
        {title : "Gene_title"},
        {title : "Gene_ID"},
	    {title : "Chromosome_annotation"},
	    {title : "GO_Function_ID"}

        ],
        "order": [[2, 'asc']],
	dom: 'Bfrtlip',
	buttons: [
            'copy', 'csv', 'excel'
        ]

    } );

    // Add event listener for opening and closing details
    $('#example tbody').on('click', 'td.details-control', function () {
        var tr = $(this).closest('tr');
        var row = table.row( tr );

        if ( row.child.isShown() ) {
            // This row is already open - close it
            row.child.hide();
            tr.removeClass('shown');
        }
        else {
            // Open this row
            row.child( format(row.data()) ).show();
            tr.addClass('shown');
        }
    } );
} );


	</script>
</head>
<h2>Boxplots</h2>
<img src='###BOXPLOT###'><br/>
</td><td>
<body>
<h2>P-value histogram and Volcano plot</h2>
<img src='###HIST###'><br/>
</td><td>
<body>
<table id="example" class="compact stripe row-border" cellspacing="0" width="100%">

    </table>
</body>
</html>
author	sblanck
date	Tue, 26 Jun 2018 10:40:36 -0400
parents	1024245abc70
children