Mercurial > repos > scisjnu123 > ngsap_vc
view GATK/package_picard_1_135/tool_dependencies.xml @ 2:2c7824a8d764 draft
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author | scisjnu123 |
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date | Thu, 12 Sep 2019 06:50:21 -0400 |
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<?xml version="1.0"?> <tool_dependency> <package name="picard" version="1.135"> <install version="1.0"> <actions_group> <actions architecture="x86_64" os="linux"> <action type="download_by_url">https://github.com/broadinstitute/picard/releases/download/1.135/picard-tools-1.135.zip</action> <action type="move_directory_files"> <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR</destination_directory> </action> </actions> <action type="set_environment"> <environment_variable name="JAVA_JAR_PATH" action="set_to">$INSTALL_DIR</environment_variable> </action> </actions_group> </install> <readme> This picard package dependency is retrieved directly from https://github.com/broadinstitute/picard/releases </readme> </package> </tool_dependency>