Mercurial > repos > scottx611x > tophat2_with_gene_annotations
comparison tophat2/tophat2_wrapper.xml @ 18:11a6a9ac5432 draft
Uploaded
| author | scottx611x |
|---|---|
| date | Thu, 16 Jun 2016 15:14:50 -0400 |
| parents | 620cb7a7ef60 |
| children | c9b715a5ca1f |
comparison
equal
deleted
inserted
replaced
| 17:2a1ed6421876 | 18:11a6a9ac5432 |
|---|---|
| 2 <!-- Wrapper compatible with Tophat version 2.0.0+ --> | 2 <!-- Wrapper compatible with Tophat version 2.0.0+ --> |
| 3 <description>Gapped-read mapper for RNA-seq data</description> | 3 <description>Gapped-read mapper for RNA-seq data</description> |
| 4 <version_command>tophat2 --version</version_command> | 4 <version_command>tophat2 --version</version_command> |
| 5 <requirements> | 5 <requirements> |
| 6 <requirement type="package" version="2.2.5">bowtie2</requirement> | 6 <requirement type="package" version="2.2.5">bowtie2</requirement> |
| 7 <requirement type="package" version="2.0.14">tophat</requirement> | 7 <requirement type="package" version="2.1.0">tophat</requirement> |
| 8 </requirements> | 8 </requirements> |
| 9 | 9 |
| 10 <command> | 10 <command> |
| 11 ## | 11 ## |
| 12 ## Set path to index, building the reference if necessary. | 12 ## Set path to index, building the reference if necessary. |