annotate test-data/bowtie_in5.fastqsanger @ 1:86d20727b5a9 draft default tip

Added README file
author "Shantanu Pavgi <pavgi@uab.edu>"
date Mon, 26 Aug 2013 16:02:58 -0500
parents b8d21c7bb4e4
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
1 @Dummy:1:1:1761:343/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
2 TTTATCGCTTCCATGACGCAGAAGTTAACACTTTCGGATATTTCTGATGA
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
3 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
4 IIIIIII""IIIIIIIIIII?I0IIIIHIIIGIIIII0II?I""IIIIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
5 @Dummy:1:1:1578:331/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
6 TGTCAAAAACTGACGCGTTGGATGAGGAGAAGTGGCTTAATATGCTTGGC
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
7 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
8 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
9 @Dummy:1:1:1647:512/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
10 TACTGAACAATCCGTACGTTTCCAGACCGCTTTGGCCTCTATTAAGCTCA
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
11 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
12 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
13 @Dummy:1:1:1570:620/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
14 GAGTAACAAAGTaaaGTTTGGAccGTTTTTGTCTCGTGCTCGTCGCTGCG
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
15 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
16 IIIIIII""IIIIIIIIIIIIIBIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
17 @Dummy:1:1:1599:330/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
18 AGAAGAAAACGTGCGTCAAAAATTACGTGCaGAAGGAGTGATGTAATGTC
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
19 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
20 IIIIIII""IIIIIIIIIIIIIIIIIII<III@II"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
21 @Dummy:1:1:1652:270/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
22 AGCGTAAAGGCGCTCGTCTTTGGTATGTAGGacTTTGCATTGTTTAATTG
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
23 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
24 IIIIIII""IIIIIIIIIIIIIIIIIIIIIII6II"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
25 @Dummy:1:1:1746:351/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
26 CTCATCGTCACGTTTATGGTGAACAGTGGATTAAGTTCATGAAGGATGGT
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
27 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
28 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
29 @Dummy:1:1:1582:633/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
30 CCGCTTCCTCCTGAGACTGAGCTTTCTCGCCAAATGACGACTTCTACCAC
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
31 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
32 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
33 @Dummy:1:1:1598:534/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
34 GCGCTCTAATCTCTGGGCATCTGGCTATGATGTTGATGGAACTGACCAAA
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
35 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
36 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
37 @Dummy:1:1:1572:324/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
38 AAGGTGCTTaaaTTCgtGGGTCCTGAGCTGGCGACCCTGTTTTGTATGGC
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
39 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
40 IIIIIII""IIIIIIIIIIIIIIIIIIII+7I05I"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
41 @Dummy:1:1:1749:466/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
42 TTGCAGTGGAATAGTCAGGTTAAATTTAATGTGACCGTTTATCGCAATCT
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
43 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
44 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
45 @Dummy:1:1:1629:446/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
46 AGGTTATAACGCCGAAGCGGTAAAAATTTTAATTTTTGCCGCTGAGGGGT
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
47 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
48 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
49 @Dummy:1:1:1763:587/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
50 AAGCTACATCGTCAACGTTATATTTTGATAGTTTGACGGTTAATGCTGGT
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
51 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
52 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
53 @Dummy:1:1:1616:363/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
54 TGTTTATCCTTTGAATGGTCGCCATGATGGTGGTTATTATACCGTCAAGG
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
55 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
56 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIDIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
57 @Dummy:1:1:1768:715/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
58 ACCCTGATGAGGCCGCCCCTAGTTTTGTTTCTGGTGCTATGGCTAAAGCT
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
59 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
60 IIIIIII""IIIIIIIIIIIIIDIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
61 @Dummy:1:1:1572:270/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
62 TGAGATGCTTGCTTATCAACAGAAGGAGTCTACTGCTCGCGTTGCGTCTA
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
63 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
64 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIIII"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
65 @Dummy:1:1:1673:514/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
66 ATTATTTTGACTTTGAGCGTATCGAGGCTCTTAAACCTGCTATTGAGGCT
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
67 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
68 IIIIIII""IIIIIIIIIIIIIIIIIIIIIIIII1"IIIIIII000IIII
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
69 @Dummy:1:1:1634:330/1
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
70 GGATATTCGCGATGAGTATAATTACCCCAAAAAGAAAGGTATTAAGGATG
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
71 +
b8d21c7bb4e4 Uploaded
shantanu
parents:
diff changeset
72 IIIIIII""IIIIIIIIIIIIIIIIIIIIIII8II"IIIIIII000IIII